BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011153
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi...   358   1e-96
emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]   357   4e-96
emb|CBI18522.3| unnamed protein product [Vitis vinifera]              355   1e-95
ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containi...   296   5e-78
gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]   290   5e-76

>ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
            mitochondrial-like [Vitis vinifera]
          Length = 993

 Score =  358 bits (920), Expect = 1e-96
 Identities = 193/368 (52%), Positives = 250/368 (67%), Gaps = 20/368 (5%)
 Frame = +1

Query: 1    AYNLVMGSKYNLPXXXXXXXXXXXXGLCKEGYISKALDLCTFVRRKGIMLNIITYNSIIN 180
            AY LV+G++ NLP             LCKEG++ KALDLC FV++KGI LNI  YNS+IN
Sbjct: 623  AYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVIN 682

Query: 181  GLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLFERMVIKGSRP 360
            GLCRQGCLVQAFR+FDSLE I +VPS ITY+ LI +L KEG LLDA++LFE+MVIKG  P
Sbjct: 683  GLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNP 742

Query: 361  NTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXX 540
            N RVYNSLI+G+C+FG M+EAL+LL+ L+ + +KPDEFTV+A+IN   H GDME      
Sbjct: 743  NVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFF 802

Query: 541  XXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKFQTESM 720
                   +LPD+LGFMYLVRGLC+KGRMEE+R I+REMLQ +SV+ L+  V+T+ +TES+
Sbjct: 803  FEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESV 862

Query: 721  EHLLRFLCEQGRIQEANTVLDEVGSMFYPVGK-------------------FGAQSKGNF 843
            E  +  LCEQG IQEA TVL+EVGS+F+P+G+                   FGA S    
Sbjct: 863  ESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKIYEGVTFGAVSS--- 919

Query: 844  FVSQSSIS-KYENVLELETCSEVEQKDKHHVYFEEESQLKDFDSYCSLITLLCSRGELHK 1020
                SS++ K +  + L    +VE     +   E+ S++ DF+SY SLI  LCSRGEL +
Sbjct: 920  --KHSSLNHKMDLDVGLSNVKKVEMVVDDYDNSEKGSRVPDFESYYSLIASLCSRGELLE 977

Query: 1021 ANNLAKAL 1044
            AN   + +
Sbjct: 978  ANRKTRQM 985



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 52/184 (28%), Positives = 94/184 (51%)
 Frame = +1

Query: 91  GYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPSVITY 270
           G + +  DL +++ R+  + +++ Y+S I G  R+G LV+A R    +    + P  ++Y
Sbjct: 137 GRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSY 196

Query: 271 SILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLVSLEV 450
           +ILI   S+EGY+  A    E+M   G +PN   Y +++ G C+ G++ EA  L   +E 
Sbjct: 197 TILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVEN 256

Query: 451 KGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEE 630
            G++ DEF    +I+     GD++            G+ P  + +  ++ GLC  GR  E
Sbjct: 257 LGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSE 316

Query: 631 SRSI 642
           +  +
Sbjct: 317 ADEV 320



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 59/237 (24%), Positives = 110/237 (46%)
 Frame = +1

Query: 76  GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
           G  +EGY+ KA+     +++ G+  N++TY +I+ G C++G L +A+ +F  +EN+ +  
Sbjct: 202 GFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEV 261

Query: 256 SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLL 435
               Y  LI      G +     L E M  +G  P+   YNS+ING C+ G   EA ++ 
Sbjct: 262 DEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV- 320

Query: 436 VSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSK 615
                KG+  D  T + +++      +++            GV  D +    +++ L   
Sbjct: 321 ----SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMV 376

Query: 616 GRMEESRSIIREMLQAQSVINLLKEVETKFQTESMEHLLRFLCEQGRIQEANTVLDE 786
           G +E++ +  + M    S ++L+ +  T         ++   C   RI+EA  + DE
Sbjct: 377 GALEDAYAFYKGM----SGMDLVADSVTYCT------MINGYCRVSRIEEALEIFDE 423



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
 Frame = +1

Query: 151 NIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLF 330
           NI T  +++  L + G + +   +   +E    V  V+ YS  I    +EG L++A +  
Sbjct: 122 NIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKH 181

Query: 331 ERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHI 510
           + M+ KG  P+T  Y  LI+G  R G +++A+  L  ++  GLKP+  T TAI+      
Sbjct: 182 KEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKK 241

Query: 511 GDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKE 690
           G ++            G+  D   ++ L+ G C++G ++              V  LL++
Sbjct: 242 GKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDID-------------CVFGLLED 288

Query: 691 VETKFQTESM---EHLLRFLCEQGRIQEANTV 777
           +E +  + S+     ++  LC+ GR  EA+ V
Sbjct: 289 MEKRGISPSIVTYNSIINGLCKAGRTSEADEV 320



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 15/334 (4%)
 Frame = +1

Query: 76   GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
            G  +E  +   L+    +   G+ ++++  N+II  L   G L  A+  +  +  + +V 
Sbjct: 337  GYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVA 396

Query: 256  SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLL 435
              +TY  +I+   +   + +A ++F+    K S  +   Y  +I G CR G +  A+++ 
Sbjct: 397  DSVTYCTMINGYCRVSRIEEALEIFDEFR-KTSISSVSCYKCMIYGLCRKGMVDMAIEVF 455

Query: 436  VSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSK 615
            + L  KGL+    T T++I   +     E            G           +  LC +
Sbjct: 456  IELNEKGLELVSGTYTSLIKASFEEQGAEGVLKFVHRIENLGREAFDTISNSAICFLCKR 515

Query: 616  GRMEESRSIIREMLQAQSVI------NLLKEVETKFQTE-SMEHLLRFLCEQGRIQEANT 774
            G    +  +   M + QSV+      ++LK + +  Q       L  FL E G       
Sbjct: 516  GFSLAACEVYMRMRRKQSVVTSRSYYSILKGLISDDQKGLGWPFLNTFLKEYG------- 568

Query: 775  VLDE--VGSMFYPVGKFGAQSKGNFF-----VSQSSISKYENVLE-LETCSEVEQKDKHH 930
             +DE  V  +  P        K  FF     V+ S+++   +VL+ L+    +    K  
Sbjct: 569  -IDEPRVSKVLVPYMCMKDADKALFFLTNIQVNTSAVAFPVSVLKSLKKNGRILDAYKLV 627

Query: 931  VYFEEESQLKDFDSYCSLITLLCSRGELHKANNL 1032
            +  EE   + D   Y  +I +LC  G L KA +L
Sbjct: 628  IGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDL 661


>emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
          Length = 993

 Score =  357 bits (915), Expect = 4e-96
 Identities = 192/368 (52%), Positives = 249/368 (67%), Gaps = 20/368 (5%)
 Frame = +1

Query: 1    AYNLVMGSKYNLPXXXXXXXXXXXXGLCKEGYISKALDLCTFVRRKGIMLNIITYNSIIN 180
            AY LV+G++ NLP             LCKEG++ KALDLC FV++KGI LNI  YNS+IN
Sbjct: 623  AYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVIN 682

Query: 181  GLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLFERMVIKGSRP 360
            GLCRQGCLVQAFR+FDSLE I +VPS ITY+ LI +L KEG LLDA++LFE+MV KG  P
Sbjct: 683  GLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNP 742

Query: 361  NTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXX 540
            N RVYNSLI+G+C+FG M+EAL+LL+ L+ + +KPDEFTV+A+IN   H GDME      
Sbjct: 743  NVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFF 802

Query: 541  XXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKFQTESM 720
                   +LPD+LGFMYLVRGLC+KGRMEE+R I+REMLQ +SV+ L+  V+T+ +TES+
Sbjct: 803  FEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESV 862

Query: 721  EHLLRFLCEQGRIQEANTVLDEVGSMFYPVGK-------------------FGAQSKGNF 843
            E  +  LCEQG IQEA TVL+EVGS+F+P+G+                   FGA S    
Sbjct: 863  ESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKIYEGVTFGAVSS--- 919

Query: 844  FVSQSSIS-KYENVLELETCSEVEQKDKHHVYFEEESQLKDFDSYCSLITLLCSRGELHK 1020
                SS++ K +  + L    +VE     +   E+ S++ DF+SY SLI  LCSRGEL +
Sbjct: 920  --KHSSLNHKMDLDVGLSNVKKVEMVVDDYDNSEKGSRVPDFESYYSLIASLCSRGELLE 977

Query: 1021 ANNLAKAL 1044
            AN   + +
Sbjct: 978  ANRKTRQM 985



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 52/184 (28%), Positives = 94/184 (51%)
 Frame = +1

Query: 91  GYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPSVITY 270
           G + +  DL +++ R+  + +++ Y+S I G  R+G LV+A R    +    + P  ++Y
Sbjct: 137 GRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSY 196

Query: 271 SILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLVSLEV 450
           +ILI   S+EGY+  A    E+M   G +PN   Y +++ G C+ G++ EA  L   +E 
Sbjct: 197 TILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVEN 256

Query: 451 KGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEE 630
            G++ DEF    +I+     GD++            G+ P  + +  ++ GLC  GR  E
Sbjct: 257 LGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSE 316

Query: 631 SRSI 642
           +  +
Sbjct: 317 ADEV 320



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 59/237 (24%), Positives = 110/237 (46%)
 Frame = +1

Query: 76  GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
           G  +EGY+ KA+     +++ G+  N++TY +I+ G C++G L +A+ +F  +EN+ +  
Sbjct: 202 GFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEV 261

Query: 256 SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLL 435
               Y  LI      G +     L E M  +G  P+   YNS+ING C+ G   EA ++ 
Sbjct: 262 DEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV- 320

Query: 436 VSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSK 615
                KG+  D  T + +++      +++            GV  D +    +++ L   
Sbjct: 321 ----SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMV 376

Query: 616 GRMEESRSIIREMLQAQSVINLLKEVETKFQTESMEHLLRFLCEQGRIQEANTVLDE 786
           G +E++ +  + M    S ++L+ +  T         ++   C   RI+EA  + DE
Sbjct: 377 GALEDAYAFYKGM----SGMDLVADSVTYCT------MINGYCRVXRIEEALEIFDE 423



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
 Frame = +1

Query: 151 NIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLF 330
           NI T  +++  L + G + +   +   +E    V  V+ YS  I    +EG L++A +  
Sbjct: 122 NIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKH 181

Query: 331 ERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHI 510
           + M+ KG  P+T  Y  LI+G  R G +++A+  L  ++  GLKP+  T TAI+      
Sbjct: 182 KEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKK 241

Query: 511 GDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKE 690
           G ++            G+  D   ++ L+ G C++G ++              V  LL++
Sbjct: 242 GKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDID-------------CVFGLLED 288

Query: 691 VETKFQTESM---EHLLRFLCEQGRIQEANTV 777
           +E +  + S+     ++  LC+ GR  EA+ V
Sbjct: 289 MEKRGISPSIVTYNSIINGLCKAGRTSEADEV 320



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 15/334 (4%)
 Frame = +1

Query: 76   GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
            G  +E  +   L+    +   G+ ++++  N+II  L   G L  A+  +  +  + +V 
Sbjct: 337  GYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVA 396

Query: 256  SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLL 435
              +TY  +I+   +   + +A ++F+    K S  +   Y  +I G CR G +  A+++ 
Sbjct: 397  DSVTYCTMINGYCRVXRIEEALEIFDEFR-KTSISSVSCYKCMIYGLCRKGMVDMAIEVF 455

Query: 436  VSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSK 615
            + L  KGL+    T T++I   +     E            G           +  LC +
Sbjct: 456  IELNEKGLELVSGTYTSLIKASFEEQGAEGVLKFVHRIENLGREAFDTISNSAICFLCKR 515

Query: 616  GRMEESRSIIREMLQAQSVI------NLLKEVETKFQTE-SMEHLLRFLCEQGRIQEANT 774
            G    +  +   M + QSV+      ++LK + +  Q       L  FL E G       
Sbjct: 516  GFSLAACEVYMRMRRKQSVVTSRSYYSILKGLISDDQKGLGWPFLNTFLKEYG------- 568

Query: 775  VLDE--VGSMFYPVGKFGAQSKGNFF-----VSQSSISKYENVLE-LETCSEVEQKDKHH 930
             +DE  V  +  P        K  FF     V+ S+++   +VL+ L+    +    K  
Sbjct: 569  -IDEPRVSKVLVPYMCMKDADKALFFLTNIQVNTSAVAFPVSVLKSLKKNGRILDAYKLV 627

Query: 931  VYFEEESQLKDFDSYCSLITLLCSRGELHKANNL 1032
            +  EE   + D   Y  +I +LC  G L KA +L
Sbjct: 628  IGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDL 661


>emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  355 bits (912), Expect = 1e-95
 Identities = 185/348 (53%), Positives = 241/348 (69%)
 Frame = +1

Query: 1    AYNLVMGSKYNLPXXXXXXXXXXXXGLCKEGYISKALDLCTFVRRKGIMLNIITYNSIIN 180
            AY LV+G++ NLP             LCKEG++ KALDLC FV++KGI LNI  YNS+IN
Sbjct: 478  AYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVIN 537

Query: 181  GLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLFERMVIKGSRP 360
            GLCRQGCLVQAFR+FDSLE I +VPS ITY+ LI +L KEG LLDA++LFE+MVIKG  P
Sbjct: 538  GLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNP 597

Query: 361  NTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXX 540
            N RVYNSLI+G+C+FG M+EAL+LL+ L+ + +KPDEFTV+A+IN   H GDME      
Sbjct: 598  NVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFF 657

Query: 541  XXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKFQTESM 720
                   +LPD+LGFMYLVRGLC+KGRMEE+R I+REMLQ +SV+ L+  V+T+ +TES+
Sbjct: 658  FEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESV 717

Query: 721  EHLLRFLCEQGRIQEANTVLDEVGSMFYPVGKFGAQSKGNFFVSQSSISKYENVLELETC 900
            E  +  LCEQG IQEA TVL+EVGS+F+P+G+                            
Sbjct: 718  ESFIISLCEQGSIQEAVTVLNEVGSIFFPIGR-----------------------RCRPQ 754

Query: 901  SEVEQKDKHHVYFEEESQLKDFDSYCSLITLLCSRGELHKANNLAKAL 1044
            +  E+++K  +Y  + S++ DF+SY SLI  LCSRGEL +AN   + +
Sbjct: 755  NRAEKEEK--IYEGKGSRVPDFESYYSLIASLCSRGELLEANRKTRQM 800



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 52/184 (28%), Positives = 94/184 (51%)
 Frame = +1

Query: 91  GYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPSVITY 270
           G + +  DL +++ R+  + +++ Y+S I G  R+G LV+A R    +    + P  ++Y
Sbjct: 137 GRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSY 196

Query: 271 SILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLVSLEV 450
           +ILI   S+EGY+  A    E+M   G +PN   Y +++ G C+ G++ EA  L   +E 
Sbjct: 197 TILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVEN 256

Query: 451 KGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEE 630
            G++ DEF    +I+     GD++            G+ P  + +  ++ GLC  GR  E
Sbjct: 257 LGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSE 316

Query: 631 SRSI 642
           +  +
Sbjct: 317 ADEV 320



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 11/330 (3%)
 Frame = +1

Query: 76   GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
            G  +EGY+ KA+     +++ G+  N++TY +I+ G C++G L +A+ +F  +EN+ +  
Sbjct: 202  GFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEV 261

Query: 256  SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLL 435
                Y  LI      G +     L E M  +G  P+   YNS+ING C+ G   EA ++ 
Sbjct: 262  DEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV- 320

Query: 436  VSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSK 615
                 KG+  D  T + +++      +++            GV  D +    +++ L   
Sbjct: 321  ----SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMV 376

Query: 616  GRMEESRSIIREMLQAQSVINLLKEVETKFQTESMEHLLRFLCEQGRIQEANTVLDEVGS 795
            G +E++ +  + M    S ++L+ +  T         ++   C   RI+EA  + DE   
Sbjct: 377  GALEDAYAFYKGM----SGMDLVADSVTYCT------MINGYCRVSRIEEALEIFDEFRK 426

Query: 796  MFYPVGKFGAQSKGNFFVSQSSISKYEN-----------VLELETCSEVEQKDKHHVYFE 942
                        +G F     SI + E            +  L+    +    K  +  E
Sbjct: 427  TSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAE 486

Query: 943  EESQLKDFDSYCSLITLLCSRGELHKANNL 1032
            E   + D   Y  +I +LC  G L KA +L
Sbjct: 487  ENLPVMDLVDYSIMIDVLCKEGHLDKALDL 516



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
 Frame = +1

Query: 151 NIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLF 330
           NI T  +++  L + G + +   +   +E    V  V+ YS  I    +EG L++A +  
Sbjct: 122 NIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKH 181

Query: 331 ERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHI 510
           + M+ KG  P+T  Y  LI+G  R G +++A+  L  ++  GLKP+  T TAI+      
Sbjct: 182 KEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKK 241

Query: 511 GDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKE 690
           G ++            G+  D   ++ L+ G C++G ++              V  LL++
Sbjct: 242 GKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDID-------------CVFGLLED 288

Query: 691 VETKFQTESM---EHLLRFLCEQGRIQEANTV 777
           +E +  + S+     ++  LC+ GR  EA+ V
Sbjct: 289 MEKRGISPSIVTYNSIINGLCKAGRTSEADEV 320


>ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
            mitochondrial-like [Glycine max]
          Length = 1064

 Score =  296 bits (759), Expect = 5e-78
 Identities = 159/366 (43%), Positives = 230/366 (62%), Gaps = 14/366 (3%)
 Frame = +1

Query: 1    AYNLVMGSKYNLPXXXXXXXXXXXXGLCKEGYISKALDLCTFVRRKGIMLNIITYNSIIN 180
            AY LV  ++ NLP            GLCK GY++KALDLC FV +KG+ LNI+ YNSIIN
Sbjct: 695  AYRLVTETQDNLPVMYADYAIVID-GLCKGGYLNKALDLCAFVEKKGMNLNIVIYNSIIN 753

Query: 181  GLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLFERMVIKGSRP 360
            GLC +G L++AFR+ DS+E + +VPS ITY+ +I AL +EG+LLDA  +F +MV+KG +P
Sbjct: 754  GLCHEGRLIEAFRLLDSIEKLNLVPSEITYATVIYALCREGFLLDAEHVFSKMVLKGFQP 813

Query: 361  NTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXX 540
              +VYNSL++G  +FG++++A +LL  +E K ++PD  T++A+INC    GDM       
Sbjct: 814  KVQVYNSLLDGISKFGQLEKAFELLNDMETKYIEPDSLTISAVINCYCQKGDMHGALEFY 873

Query: 541  XXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKFQTESM 720
                   + PD+ GF+YL+RGLC+KGRMEE+RS++REMLQ+++V+ L+  V  +  TES+
Sbjct: 874  YKFKRKDMSPDFFGFLYLIRGLCTKGRMEEARSVLREMLQSKNVVELINIVNKEVDTESI 933

Query: 721  EHLLRFLCEQGRIQEANTVLDEVGSMFYPVGKFGAQSKGNFFVSQ----------SSI-- 864
               L  LCEQGR+QEA TVL+E+  + +PV +    ++G+    +          SSI  
Sbjct: 934  SDFLGTLCEQGRVQEAVTVLNEIVCILFPVQRLSTYNQGSLKQQKIYEWKDEPKSSSIVP 993

Query: 865  SKYENVLELETC--SEVEQKDKHHVYFEEESQLKDFDSYCSLITLLCSRGELHKANNLAK 1038
            S  ++ L L +C   +V      +  +   SQL  FD Y S I  LC++GEL KAN   K
Sbjct: 994  SSCKSGLNLGSCDDKDVRNLSTDNGGYMTRSQLHGFDFYYSRIAALCAKGELQKANQSVK 1053

Query: 1039 ALSSSV 1056
               S +
Sbjct: 1054 EFLSDL 1059



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 51/237 (21%), Positives = 115/237 (48%)
 Frame = +1

Query: 79  LCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPS 258
           LCK G + +   L  ++ R+G+ L+++ Y++   G   +  L + F     +    +   
Sbjct: 205 LCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGEVFGRMREMVEKGIGHD 264

Query: 259 VITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLV 438
            ++Y++L+   SK G +  +     +M+ +G RPN   Y+++++ +C+ G+++EA  +  
Sbjct: 265 FVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFE 324

Query: 439 SLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKG 618
           S++  G+  DE+    +I+    IGD +            G+ P  + +  ++ GL   G
Sbjct: 325 SMKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSKHG 384

Query: 619 RMEESRSIIREMLQAQSVINLLKEVETKFQTESMEHLLRFLCEQGRIQEANTVLDEV 789
           R  E+  +++ +  A  VI     +    + E++  +L+    + R++E+   +D V
Sbjct: 385 RTSEADELLKNV--AADVITYSTLLHGYMEEENIPGILQ---TKRRLEESGISMDVV 436



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 33/352 (9%)
 Frame = +1

Query: 76   GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
            G  K G + K+      + ++G   N +TY++I++  C++G + +AF VF+S++++ +  
Sbjct: 274  GFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFESMKDLGIDL 333

Query: 256  SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLL 435
                + ILI    + G       LF+ M   G  P+   YN+++NG  + G   EA +LL
Sbjct: 334  DEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSKHGRTSEADELL 393

Query: 436  VS------------------------------LEVKGLKPDEFTVTAIINCCYHIGDMEX 525
             +                              LE  G+  D      +I   + +G  E 
Sbjct: 394  KNVAADVITYSTLLHGYMEEENIPGILQTKRRLEESGISMDVVMCNVLIRALFMMGAFED 453

Query: 526  XXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKF 705
                        ++P+ + +  ++ G C  GR+EE+  +  E    +++I+ L       
Sbjct: 454  VYALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFDEF--RKTLISSL------- 504

Query: 706  QTESMEHLLRFLCEQGRIQEANTVLDEVG--SMFYPVGKFGAQSKGNFFVSQSSISKYEN 879
                   ++  LC+ G  + A   L E+    +   +G F   +K  F  + +     + 
Sbjct: 505  --ACYNSIINGLCKNGMTEMAIEALLELNHEGLELDIGTFRMLTKTIFEENNT-----KK 557

Query: 880  VLELETCSEVEQKDKHHVYFEEESQLKDFDSYCS-LITLLCSRGELHKANNL 1032
             L+L             VY  E      + S C+  I LLC RG L  AN++
Sbjct: 558  ALDL-------------VYRMEGLGPDIYSSVCNDSIFLLCQRGLLDDANHM 596


>gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1053

 Score =  290 bits (742), Expect = 5e-76
 Identities = 158/372 (42%), Positives = 232/372 (62%), Gaps = 20/372 (5%)
 Frame = +1

Query: 1    AYNLVMGSKYNLPXXXXXXXXXXXXGLCKEGYISKALDLCTFVRRKGIMLNIITYNSIIN 180
            AY L+MG + +LP            GLCK GY++KALDLCT + +KG+ LNI+ YNSIIN
Sbjct: 682  AYKLLMGVQDDLPVMYVDYGVVIH-GLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIIN 740

Query: 181  GLCRQGCLVQAFRVFDSLENIYMVPSVITYSILISALSKEGYLLDARKLFERMVIKGSRP 360
            GLC  GCL++AFR+FDSLE + ++ S ITY+ LI AL +EGYL DA  +F++MV+ G +P
Sbjct: 741  GLCHDGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQP 800

Query: 361  NTRVYNSLINGHCRFGEMQEALDLLVSLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXX 540
             T+VYNSL+    + G++++A +LL  +E + +K D FTV+++INC    GDME      
Sbjct: 801  KTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFY 860

Query: 541  XXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKFQTESM 720
                   + PD+LGF+Y++RGLC+KGRMEE+RS++REMLQ+++V  ++  V ++  TES+
Sbjct: 861  YKFKGKDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQSKNVAEMINIVNSRVDTESI 920

Query: 721  EHLLRFLCEQGRIQEANTVLDEVGSMFYPVGKFGAQSKGNFFVSQSSISKYENV------ 882
               +  LC+QGRIQEA  VL+ + S F+P  +    S  N   S  S   YE+V      
Sbjct: 921  CDFIAALCDQGRIQEAVKVLNLIASEFFPAQR---SSTCNNQGSDKSHKSYESVDIGSKS 977

Query: 883  -----------LELETCSEVEQKDKHHVYFE---EESQLKDFDSYCSLITLLCSRGELHK 1020
                       L+ E+C +   K  H    +   ++S+L++FD Y S I  LC++G+L  
Sbjct: 978  STSLLSYCESGLDFESC-DTRDKRNHMTNNDSHLKKSRLRNFDFYYSRIAALCTKGDLQD 1036

Query: 1021 ANNLAKALSSSV 1056
            AN LAK + S +
Sbjct: 1037 ANELAKKMVSDM 1048



 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 55/241 (22%), Positives = 115/241 (47%), Gaps = 4/241 (1%)
 Frame = +1

Query: 79  LCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVPS 258
           LCK G + +   L   +   G+ L+++ Y+  + G   +  LV+ FR    +    +   
Sbjct: 191 LCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKGICHD 250

Query: 259 VITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEALDLLV 438
            ++Y+ILI   SK G +  +     +M+ +G  PN   Y ++++ +C+ G ++EA  L V
Sbjct: 251 FVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFV 310

Query: 439 SLEVKGLKPDEFTVTAIINCCYHIGDMEXXXXXXXXXXXXGVLPDYLGFMYLVRGLCSKG 618
            ++  G++ DEF    +I+    +GD +            G+ P+ + +  +V GL   G
Sbjct: 311 RMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYG 370

Query: 619 RMEE----SRSIIREMLQAQSVINLLKEVETKFQTESMEHLLRFLCEQGRIQEANTVLDE 786
           R +E    S+++  +++   ++++   E          +++L  L  + R++EA   +D 
Sbjct: 371 RTQEADEFSKNVTADVVTYSTLLHGYTE---------EDNVLGILQTKKRLEEAGISMDV 421

Query: 787 V 789
           V
Sbjct: 422 V 422



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 73/357 (20%), Positives = 136/357 (38%), Gaps = 34/357 (9%)
 Frame = +1

Query: 76   GLCKEGYISKALDLCTFVRRKGIMLNIITYNSIINGLCRQGCLVQAFRVFDSLENIYMVP 255
            G  K G + K+      + ++GI+ N +TY +I++  C++G + +AF +F  ++++ +  
Sbjct: 260  GFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIEL 319

Query: 256  SVITYSILISALSKEGYLLDARKLFERMVIKGSRPNTRVYNSLINGHCRFGEMQEA---- 423
                + +LI    + G      +L   M  +G  PN   YN+++NG  ++G  QEA    
Sbjct: 320  DEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEADEFS 379

Query: 424  --------------------------LDLLVSLEVKGLKPDEFTVTAIINCCYHIGDMEX 525
                                      L     LE  G+  D      +I   + +   E 
Sbjct: 380  KNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQAYED 439

Query: 526  XXXXXXXXXXXGVLPDYLGFMYLVRGLCSKGRMEESRSIIREMLQAQSVINLLKEVETKF 705
                        ++P+ + +  ++ G C  G++ E+  +  +  +            +  
Sbjct: 440  VYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDDFRKT-----------SIS 488

Query: 706  QTESMEHLLRFLCEQGRIQ---EANTVLDEVGSMFYPVGKFGAQSKGNFFVSQSSISKYE 876
                   ++  LC++G ++   EA   LD  G M    G      K  F  + S +    
Sbjct: 489  SYACYNSIINGLCKKGMVEMAIEALLELDHKGLML-DTGTHRLLMKTIFKENSSKV---- 543

Query: 877  NVLELETCSEVEQKDKHHVYFEEESQLKDFDSYCS-LITLLCSRGELHKANNLAKAL 1044
             VL+L             V   E  +L  +++ C+  I LLC RG L  A  L  A+
Sbjct: 544  -VLDL-------------VCRMESLELDIYNAICNDSIFLLCKRGLLDDAYQLWMAM 586