BLASTX nr result

ID: Bupleurum21_contig00011144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011144
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530585.1| nascent polypeptide associated complex alpha...   162   1e-37
ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243...    82   3e-13
emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]    82   3e-13
dbj|BAF01410.1| hypothetical protein [Arabidopsis thaliana]            72   2e-10
gb|AAM61398.1| unknown [Arabidopsis thaliana]                          72   2e-10

>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
            [Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
            polypeptide associated complex alpha subunit, putative
            [Ricinus communis]
          Length = 687

 Score =  162 bits (410), Expect = 1e-37
 Identities = 91/307 (29%), Positives = 157/307 (51%), Gaps = 4/307 (1%)
 Frame = +3

Query: 96   TNGRINLNKIKPSLEEVKADPPTDNAKMIIFRRLFLYVIASCFFGNDHSVIKHGIVQFLE 275
            + G++ L+ + P   + +  P   + + + FRRL LY++ SCFF     +I   +V  + 
Sbjct: 333  SQGKLKLDVLCPLTLDFRKKPANSDLEWM-FRRLILYLVGSCFFSGPDMMIPIRLVSAMS 391

Query: 276  RIDEVKHYNWGGITYAAFLAGMRRKVTGETGAFTAFWQFLPLWAFEYLDISRP-ERTEVD 452
             I ++  Y+WG  T++AFL GMR K +   G F+ F+ FL LWA+E++   RP    + D
Sbjct: 392  NIQKISQYDWGAATFSAFLRGMRHKTSECRGTFSGFYPFLLLWAYEHIPYQRPLTNFDPD 451

Query: 453  AFPRARRWKFPKGEPKKGYNHTEFVGLRCQLNYINEAQVTWQPYLAFAVHRVPSTLHSTL 632
             FPRAR+W   K +     N  +F   R +L Y+ E +V + PY    +       +   
Sbjct: 452  IFPRARQWDLTKMDVP---NSNDFTWYRLELEYLEEDEVNFDPY--GKLWEEEGLEYERE 506

Query: 633  LALSRVRFWSLDTWEYYLGERCRRQLGLPCRVPFAPPVKMHGTSED---EPEDTIGVGNS 803
            L+  R+ F  L++WE Y+GER  RQ G   R+P +PP + +G            +  G  
Sbjct: 507  LSQKRIAFLGLESWELYMGERNLRQFGGGVRIPHSPPAERYGEGSQILTGAARKLLQGVD 566

Query: 804  ADNFVKDETVDYTSWFAANSIGNISNVERCFGGVETGEMVLKDWMAKHRPDLILLPQSEY 983
            A + ++D+   Y  WF ANS+G I ++++  G    G  +L+ W+  H+    ++   + 
Sbjct: 567  AWDLLEDKEYSYVEWFRANSLGRIVDLDQFQGRKILGGRLLELWLRVHQDGHKVISPQDL 626

Query: 984  KEISEAR 1004
            +E+ + +
Sbjct: 627  QELEDMK 633


>ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243242 [Vitis vinifera]
          Length = 532

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 7/239 (2%)
 Frame = +3

Query: 162 TDNAKMIIFRRLFLYVIASCFFGNDHSVIKHGIVQFLERIDEVKHYNWGGITYAAFLAGM 341
           TD  +    R   LY+     FG     +    +  LE +D +  Y+WGG  YAA    M
Sbjct: 63  TDRDRECHTRAFILYLFGCTMFGTLDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHM 122

Query: 342 RRKVTGETGAFTAFWQFLPLWAFEYLDISRPERTEVD--AFPRARR-WKFPKGEPKKGYN 512
                G+       W+   +W++EY  +  P     D  AFPR+ R W   + E    + 
Sbjct: 123 NSVSRGKAHRLGGLWKVWEIWSYEYFSLLAPSLKVDDSMAFPRSLRWWGGSEFEMCPKHR 182

Query: 513 HTEFVGLRCQLNYINEAQVTWQPYLAFAVHRVPSTLHSTLLALSRVRFWSLDTWEYYLGE 692
             +    R  +N +    V W P+        P   H+  L+  R+ F       ++LGE
Sbjct: 183 MVDLKNFREAINNLTIEMVNWNPWGEIEPTLPPEIRHAKELSRRRILFEGPSGQFWFLGE 242

Query: 693 RCRRQ-LGLP-CRVPFAPPVKMHGTSEDEPEDTIGV--GNSADNFVKDETVDYTSWFAA 857
           R   Q LG P   VP  PP+ M  T+    E+  G   G  A+ F+ D + +Y  + A+
Sbjct: 243 RLSMQTLGSPQPMVPLPPPMSMRLTASFSAEELEGCFKGFPAERFI-DHSGNYDDFCAS 300


>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 7/239 (2%)
 Frame = +3

Query: 162 TDNAKMIIFRRLFLYVIASCFFGNDHSVIKHGIVQFLERIDEVKHYNWGGITYAAFLAGM 341
           TD  +    R   LY+     FG     +    +  LE +D +  Y+WGG  YAA    M
Sbjct: 187 TDRDRECHTRAFILYLFGCTMFGTLDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHM 246

Query: 342 RRKVTGETGAFTAFWQFLPLWAFEYLDISRPERTEVD--AFPRARR-WKFPKGEPKKGYN 512
                G+       W+   +W++EY  +  P     D  AFPR+ R W   + E    + 
Sbjct: 247 NSVSRGKAHRLGGLWKVWEIWSYEYFSLLAPSLKVDDSMAFPRSLRWWGGSEFEMCPKHR 306

Query: 513 HTEFVGLRCQLNYINEAQVTWQPYLAFAVHRVPSTLHSTLLALSRVRFWSLDTWEYYLGE 692
             +    R  +N +    V W P+        P   H+  L+  R+ F       ++LGE
Sbjct: 307 MVDLKNFREAINNLTIEMVNWNPWGEIEPTLPPEIRHAKELSRRRILFEGPSGQFWFLGE 366

Query: 693 RCRRQ-LGLP-CRVPFAPPVKMHGTSEDEPEDTIGV--GNSADNFVKDETVDYTSWFAA 857
           R   Q LG P   VP  PP+ M  T+    E+  G   G  A+ F+ D + +Y  + A+
Sbjct: 367 RLSMQTLGSPQPMVPLPPPMSMRLTASFSAEELEGCFKGFPAERFI-DHSGNYDDFCAS 424


>dbj|BAF01410.1| hypothetical protein [Arabidopsis thaliana]
          Length = 509

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 58/223 (26%), Positives = 87/223 (39%), Gaps = 1/223 (0%)
 Frame = +3

Query: 66  ELLEAGTDAITNGRINLNKIKPSLEEVKADPPTDNAKMIIFRRLFLYVIASCFFGN-DHS 242
           +L  A    +   R+ LN +K +  E   D   D  K    R   LY+I S  F   D  
Sbjct: 137 KLPSAANKEVNCSRVKLNWLKRTFSECPEDASFDVVKCHT-RAYLLYLIGSTIFATTDGD 195

Query: 243 VIKHGIVQFLERIDEVKHYNWGGITYAAFLAGMRRKVTGETGAFTAFWQFLPLWAFEYLD 422
            +    +   E  D+   Y WG    A     +                 L  W++ +LD
Sbjct: 196 KVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCLTLLQCWSYFHLD 255

Query: 423 ISRPERTEVDAFPRARRWKFPKGEPKKGYNHTEFVGLRCQLNYINEAQVTWQPYLAFAVH 602
           I RPE++E   FP A  WK  KG   K    T+    R +L+ ++ +++TW PY  F   
Sbjct: 256 IGRPEKSEA-CFPLALLWK-GKGSRSK----TDLSEYRRELDDLDPSKITWCPYERFENL 309

Query: 603 RVPSTLHSTLLALSRVRFWSLDTWEYYLGERCRRQLGLPCRVP 731
             P      +L  S+      +  E +  +RC RQ G    +P
Sbjct: 310 IPPHIKAKLILGRSKTTLVCFEKIELHFPDRCLRQFGKRQPIP 352


>gb|AAM61398.1| unknown [Arabidopsis thaliana]
          Length = 509

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 58/223 (26%), Positives = 87/223 (39%), Gaps = 1/223 (0%)
 Frame = +3

Query: 66  ELLEAGTDAITNGRINLNKIKPSLEEVKADPPTDNAKMIIFRRLFLYVIASCFFGN-DHS 242
           +L  A    +   R+ LN +K +  E   D   D  K    R   LY+I S  F   D  
Sbjct: 137 KLPSAANKEVNCSRVKLNWLKRTFSECPEDASFDVVKCHT-RAYLLYLIGSTIFATTDGD 195

Query: 243 VIKHGIVQFLERIDEVKHYNWGGITYAAFLAGMRRKVTGETGAFTAFWQFLPLWAFEYLD 422
            +    +   E  D+   Y WG    A     +                 L  W++ +LD
Sbjct: 196 KVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCLTLLQCWSYFHLD 255

Query: 423 ISRPERTEVDAFPRARRWKFPKGEPKKGYNHTEFVGLRCQLNYINEAQVTWQPYLAFAVH 602
           I RPE++E   FP A  WK  KG   K    T+    R +L+ ++ +++TW PY  F   
Sbjct: 256 IGRPEKSEA-CFPLALLWK-GKGSRSK----TDLSEYRRELDDLDPSKITWCPYERFENL 309

Query: 603 RVPSTLHSTLLALSRVRFWSLDTWEYYLGERCRRQLGLPCRVP 731
             P      +L  S+      +  E +  +RC RQ G    +P
Sbjct: 310 IPPHIKAKLILGRSKTTLVCFEKIELHFPDRCLRQFGKRQPIP 352


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