BLASTX nr result

ID: Bupleurum21_contig00011141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011141
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putativ...   322   7e-86
ref|XP_003637734.1| ATP-dependent RNA helicase [Medicago truncat...   317   2e-84
ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   314   1e-83
ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   314   1e-83
ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   314   1e-83

>ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 751

 Score =  322 bits (824), Expect = 7e-86
 Identities = 157/176 (89%), Positives = 169/176 (96%)
 Frame = +1

Query: 1    PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRK 180
            PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLP+D+EQYIHRLGRTGRK
Sbjct: 576  PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRK 635

Query: 181  GKEGLGILLLAPWEEYFLSTIRDLPISKGSLPSVDPDTKKKVEKALAHVDMKNKEAAYQA 360
            GKEG+GILLLAPWEE FLSTI+DLPISK  +PSVDPDTKKKVE++L+HV+MKNKEAAYQA
Sbjct: 636  GKEGVGILLLAPWEESFLSTIKDLPISKAPVPSVDPDTKKKVERSLSHVEMKNKEAAYQA 695

Query: 361  WLGYYNSVKTIGKDKYRLVELANEFSRCMGLDNPPAISKLVLGKMGLRNIPGLRSK 528
            WLGYYNS K +G+DKYRLVELAN+FSR MGLDNPPAI KLVLGKMGLRNIPGLRSK
Sbjct: 696  WLGYYNSSKLVGRDKYRLVELANDFSRSMGLDNPPAIPKLVLGKMGLRNIPGLRSK 751


>ref|XP_003637734.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503669|gb|AES84872.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 290

 Score =  317 bits (812), Expect = 2e-84
 Identities = 153/176 (86%), Positives = 167/176 (94%)
 Frame = +1

Query: 1   PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRK 180
           PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLV+QVGLP+DK+QYIHRLGRTGRK
Sbjct: 115 PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRK 174

Query: 181 GKEGLGILLLAPWEEYFLSTIRDLPISKGSLPSVDPDTKKKVEKALAHVDMKNKEAAYQA 360
           GKEG GILLLAPWEE+FL+T +DLPI K  +P VDPDTKKKVE+AL++V+MKNKEAAYQA
Sbjct: 175 GKEGQGILLLAPWEEFFLATAKDLPIVKAPVPLVDPDTKKKVERALSNVEMKNKEAAYQA 234

Query: 361 WLGYYNSVKTIGKDKYRLVELANEFSRCMGLDNPPAISKLVLGKMGLRNIPGLRSK 528
           WLGYYNS K +GKDKYRLVELANEFSRCMGLDNPPAI KLVLGKMGL+N+PGLRSK
Sbjct: 235 WLGYYNSNKKVGKDKYRLVELANEFSRCMGLDNPPAIPKLVLGKMGLKNVPGLRSK 290


>ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            31-like [Cucumis sativus]
          Length = 842

 Score =  314 bits (804), Expect = 1e-83
 Identities = 151/175 (86%), Positives = 166/175 (94%)
 Frame = +1

Query: 4    QSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKG 183
            QSYRT+VSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLP+D+EQYIHRLGRTGRKG
Sbjct: 612  QSYRTKVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKG 671

Query: 184  KEGLGILLLAPWEEYFLSTIRDLPISKGSLPSVDPDTKKKVEKALAHVDMKNKEAAYQAW 363
            KEG GILLL PWEE+FLST++DLPI+K  +P +DP+TKKKV++AL HV+MKNKEAAYQAW
Sbjct: 672  KEGQGILLLTPWEEFFLSTVKDLPITKAPMPLIDPETKKKVDRALVHVEMKNKEAAYQAW 731

Query: 364  LGYYNSVKTIGKDKYRLVELANEFSRCMGLDNPPAISKLVLGKMGLRNIPGLRSK 528
            LGYYNS KT+GKDKYRLVELANEFSR MGLDNPPAISKLVLGKMGL+NIPGLR K
Sbjct: 732  LGYYNSNKTVGKDKYRLVELANEFSRSMGLDNPPAISKLVLGKMGLKNIPGLRVK 786


>ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            26-like [Cucumis sativus]
          Length = 841

 Score =  314 bits (804), Expect = 1e-83
 Identities = 151/175 (86%), Positives = 166/175 (94%)
 Frame = +1

Query: 4    QSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKG 183
            QSYRT+VSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLP+D+EQYIHRLGRTGRKG
Sbjct: 611  QSYRTKVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKG 670

Query: 184  KEGLGILLLAPWEEYFLSTIRDLPISKGSLPSVDPDTKKKVEKALAHVDMKNKEAAYQAW 363
            KEG GILLL PWEE+FLST++DLPI+K  +P +DP+TKKKV++AL HV+MKNKEAAYQAW
Sbjct: 671  KEGQGILLLTPWEEFFLSTVKDLPITKAPMPLIDPETKKKVDRALVHVEMKNKEAAYQAW 730

Query: 364  LGYYNSVKTIGKDKYRLVELANEFSRCMGLDNPPAISKLVLGKMGLRNIPGLRSK 528
            LGYYNS KT+GKDKYRLVELANEFSR MGLDNPPAISKLVLGKMGL+NIPGLR K
Sbjct: 731  LGYYNSNKTVGKDKYRLVELANEFSRSMGLDNPPAISKLVLGKMGLKNIPGLRVK 785


>ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine max]
          Length = 806

 Score =  314 bits (804), Expect = 1e-83
 Identities = 154/177 (87%), Positives = 168/177 (94%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1    PQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRK 180
            PQSYRTRVS+EFR+SKGLILVTSDVSARGVDYPDVTLVIQVGLP+D+EQYIHRLGRTGR+
Sbjct: 630  PQSYRTRVSEEFRRSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRR 689

Query: 181  GKEGLGILLLAPWEEYFLSTIRDLPISKGS-LPSVDPDTKKKVEKALAHVDMKNKEAAYQ 357
            GKEG GILLLAPWE++FLST++DLPI K   LPSVDPDTKKKVEKAL+HV+MKNKEAAYQ
Sbjct: 690  GKEGQGILLLAPWEDFFLSTVKDLPIEKAPVLPSVDPDTKKKVEKALSHVEMKNKEAAYQ 749

Query: 358  AWLGYYNSVKTIGKDKYRLVELANEFSRCMGLDNPPAISKLVLGKMGLRNIPGLRSK 528
            AWLGYYNS K +G+DKYRLVELANEFSR MGLDNPPAI KLVLGKMGLRNIPGLR+K
Sbjct: 750  AWLGYYNSNKKVGRDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLRNIPGLRAK 806


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