BLASTX nr result

ID: Bupleurum21_contig00011140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011140
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40
ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glyc...   170   3e-40
gb|ACU17589.1| unknown [Glycine max]                                  170   3e-40
ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago tr...   166   4e-39

>ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|222842736|gb|EEE80283.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  174 bits (441), Expect = 2e-41
 Identities = 81/104 (77%), Positives = 91/104 (87%)
 Frame = +1

Query: 67  FRINSYMNSLATTCFGRFLIWSPLLTSTHDVVTKNFGELPVGTVCVADVQYKGRGRSMNV 246
           F I  +MNSL+T  FGR LIWSP+L STHDVV+ NFGELP+GTVCVADVQYKGRGRS NV
Sbjct: 61  FCIERFMNSLSTNQFGRLLIWSPILPSTHDVVSNNFGELPIGTVCVADVQYKGRGRSKNV 120

Query: 247 WESPKGCLLFSFTVQMEDGRIVPLVQYVASLAMTEAIHYVCDKN 378
           WESP GCL+FSFT+QMEDGR+VPL+QYV SLA+TEAI  VCDKN
Sbjct: 121 WESPAGCLMFSFTIQMEDGRVVPLLQYVVSLAVTEAIKDVCDKN 164


>ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|222856868|gb|EEE94415.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  172 bits (435), Expect = 1e-40
 Identities = 77/104 (74%), Positives = 92/104 (88%)
 Frame = +1

Query: 67  FRINSYMNSLATTCFGRFLIWSPLLTSTHDVVTKNFGELPVGTVCVADVQYKGRGRSMNV 246
           F ++ +MNSL+T  FGR LIWSPLL STHD+V+ NFGELP+GTVC+ADVQYKGRGRS NV
Sbjct: 59  FSLSRFMNSLSTNLFGRLLIWSPLLPSTHDLVSNNFGELPIGTVCIADVQYKGRGRSKNV 118

Query: 247 WESPKGCLLFSFTVQMEDGRIVPLVQYVASLAMTEAIHYVCDKN 378
           WESP GCL+FSFT+QMEDG++VPL+QYV SLA+TEAI  +CDKN
Sbjct: 119 WESPAGCLMFSFTIQMEDGQVVPLLQYVVSLAVTEAIKDLCDKN 162


>ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glycine max]
          Length = 361

 Score =  170 bits (431), Expect = 3e-40
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = +1

Query: 67  FRINSYMNSLATTCFGRFLIWSPLLTSTHDVVTKNFGELPVGTVCVADVQYKGRGRSMNV 246
           F+++SYM+SL+T  FGR L+WSP LTSTHDVV+ NF ELP+GTVC+ADVQ KGRGRS NV
Sbjct: 89  FQVHSYMDSLSTNQFGRLLVWSPDLTSTHDVVSHNFCELPIGTVCIADVQTKGRGRSKNV 148

Query: 247 WESPKGCLLFSFTVQMEDGRIVPLVQYVASLAMTEAIHYVCDKN 378
           WESP GCL+FSFT+QMEDGR+VPLVQYV SLAMTEAI  +CDKN
Sbjct: 149 WESPLGCLMFSFTMQMEDGRVVPLVQYVVSLAMTEAIKDICDKN 192


>gb|ACU17589.1| unknown [Glycine max]
          Length = 234

 Score =  170 bits (431), Expect = 3e-40
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = +1

Query: 67  FRINSYMNSLATTCFGRFLIWSPLLTSTHDVVTKNFGELPVGTVCVADVQYKGRGRSMNV 246
           F+++SYM+SL+T  FGR L+WSP LTSTHDVV+ NF ELP+GTVC+ADVQ KGRGRS NV
Sbjct: 89  FQVHSYMDSLSTNQFGRLLVWSPDLTSTHDVVSHNFCELPIGTVCIADVQTKGRGRSKNV 148

Query: 247 WESPKGCLLFSFTVQMEDGRIVPLVQYVASLAMTEAIHYVCDKN 378
           WESP GCL+FSFT+QMEDGR+VPLVQYV SLAMTEAI  +CDKN
Sbjct: 149 WESPLGCLMFSFTMQMEDGRVVPLVQYVVSLAMTEAIKDICDKN 192


>ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago truncatula]
           gi|355490146|gb|AES71349.1| Holocarboxylase synthetase
           hcs2 [Medicago truncatula]
          Length = 361

 Score =  166 bits (421), Expect = 4e-39
 Identities = 79/104 (75%), Positives = 89/104 (85%)
 Frame = +1

Query: 67  FRINSYMNSLATTCFGRFLIWSPLLTSTHDVVTKNFGELPVGTVCVADVQYKGRGRSMNV 246
           F+ +S+MNSL+T  FGR LIWSP LTSTHDVV+ NF ELPVGTVCV D+Q KGRGRS N 
Sbjct: 89  FQFSSFMNSLSTNQFGRLLIWSPELTSTHDVVSHNFCELPVGTVCVGDIQNKGRGRSKNA 148

Query: 247 WESPKGCLLFSFTVQMEDGRIVPLVQYVASLAMTEAIHYVCDKN 378
           WESP GCL+FSFT+QMEDGRIVPLVQYV SLA+TEAI  +CDKN
Sbjct: 149 WESPLGCLMFSFTLQMEDGRIVPLVQYVVSLAITEAIKDICDKN 192


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