BLASTX nr result
ID: Bupleurum21_contig00011126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00011126
(820 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25986.1| unknown [Picea sitchensis] 95 1e-33
ref|XP_002530009.1| conserved hypothetical protein [Ricinus comm... 119 3e-26
ref|XP_002278703.2| PREDICTED: uncharacterized protein LOC100249... 119 5e-26
ref|XP_002323877.1| predicted protein [Populus trichocarpa] gi|2... 117 7e-25
ref|NP_198769.1| uncharacterized protein [Arabidopsis thaliana] ... 104 1e-20
>gb|ABK25986.1| unknown [Picea sitchensis]
Length = 254
Score = 94.7 bits (234), Expect(2) = 1e-33
Identities = 39/67 (58%), Positives = 56/67 (83%)
Frame = +3
Query: 12 TYSSRISTNIPLYESPGASFDRYLEDKPRVFKAIFPDTKRSQRLNEEEWRIHMLPIQFLY 191
++SS +ST++PLYE F++YL D+ R+F+AIFPD +RS++LN+EEWRIHMLPI+FL+
Sbjct: 48 SFSSELSTDLPLYEPSEVPFEQYLSDRERIFQAIFPDKRRSEKLNDEEWRIHMLPIEFLF 107
Query: 192 LTVVPVV 212
LT PV+
Sbjct: 108 LTAFPVI 114
Score = 75.1 bits (183), Expect(2) = 1e-33
Identities = 34/72 (47%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +2
Query: 326 ILCVWQLRWELQGLDDIVKPSHFSLDVKGAMYADRH-TKSRLKGQLQMSMSFVVPPVLAL 502
+L + RWEL+GLD +++PS F L V+GA+Y++ + +SRLKG ++M++SFV+PP LA+
Sbjct: 138 VLTLEATRWELRGLDYVLQPSDFVLGVRGALYSENNGVRSRLKGLMEMTVSFVLPPALAV 197
Query: 503 IPEDIRRGVAES 538
IPEDI + + +
Sbjct: 198 IPEDILKSIGHA 209
>ref|XP_002530009.1| conserved hypothetical protein [Ricinus communis]
gi|223530488|gb|EEF32371.1| conserved hypothetical
protein [Ricinus communis]
Length = 237
Score = 119 bits (297), Expect(2) = 3e-26
Identities = 55/68 (80%), Positives = 64/68 (94%)
Frame = +3
Query: 9 STYSSRISTNIPLYESPGASFDRYLEDKPRVFKAIFPDTKRSQRLNEEEWRIHMLPIQFL 188
+TYSSRIST+IP+YESPGASFDRYLEDKPRVFKA+FPD +RS++LN+EEWRI MLPI FL
Sbjct: 63 ATYSSRISTDIPIYESPGASFDRYLEDKPRVFKAMFPDKRRSEQLNKEEWRIQMLPINFL 122
Query: 189 YLTVVPVV 212
+LTV PVV
Sbjct: 123 FLTVWPVV 130
Score = 26.2 bits (56), Expect(2) = 3e-26
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 241 NITKVLELDIVSLQVSSVNKVL 306
NITKVLEL+I Q+ ++ VL
Sbjct: 150 NITKVLELEITRWQLQGLDNVL 171
Score = 95.1 bits (235), Expect = 2e-17
Identities = 43/65 (66%), Positives = 59/65 (90%), Gaps = 1/65 (1%)
Frame = +2
Query: 347 RWELQGLDDIVKPSHFSLDVKGAMYADR-HTKSRLKGQLQMSMSFVVPPVLALIPEDIRR 523
RW+LQGLD++++PSHFSL V+G +YADR ++RLKGQL+M++SFV+PPVLAL+PED+R+
Sbjct: 161 RWQLQGLDNVLEPSHFSLGVEGLLYADRLGARTRLKGQLEMNISFVLPPVLALVPEDVRK 220
Query: 524 GVAES 538
VAES
Sbjct: 221 NVAES 225
>ref|XP_002278703.2| PREDICTED: uncharacterized protein LOC100249192 [Vitis vinifera]
gi|296082953|emb|CBI22254.3| unnamed protein product
[Vitis vinifera]
Length = 251
Score = 119 bits (298), Expect(2) = 5e-26
Identities = 55/68 (80%), Positives = 63/68 (92%)
Frame = +3
Query: 9 STYSSRISTNIPLYESPGASFDRYLEDKPRVFKAIFPDTKRSQRLNEEEWRIHMLPIQFL 188
STY+SRIST++PLYESPGA FD YLED+PRVFKAIFPD +RSQR+NEEEWRI MLPIQFL
Sbjct: 56 STYTSRISTDLPLYESPGALFDEYLEDQPRVFKAIFPDKRRSQRINEEEWRIQMLPIQFL 115
Query: 189 YLTVVPVV 212
+LTV PV+
Sbjct: 116 FLTVWPVI 123
Score = 25.0 bits (53), Expect(2) = 5e-26
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 241 NITKVLELDIVSLQVSSVNKVLR 309
NITKVLEL+I+ ++ ++ +L+
Sbjct: 143 NITKVLELNIIRWELQGLDDLLK 165
Score = 98.6 bits (244), Expect = 1e-18
Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +2
Query: 344 LRWELQGLDDIVKPSHFSLDVKGAMYADRHT-KSRLKGQLQMSMSFVVPPVLALIPEDIR 520
+RWELQGLDD++KPSHFSL VKGA+Y +R +SRLKGQL+MS+SFV+PPVLAL+PED
Sbjct: 153 IRWELQGLDDLLKPSHFSLGVKGALYPERQAMQSRLKGQLEMSISFVLPPVLALVPEDGL 212
Query: 521 RGVAES 538
R VAES
Sbjct: 213 RSVAES 218
>ref|XP_002323877.1| predicted protein [Populus trichocarpa] gi|222866879|gb|EEF04010.1|
predicted protein [Populus trichocarpa]
Length = 201
Score = 117 bits (293), Expect(2) = 7e-25
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3
Query: 3 SASTYSSRISTNIPLYESPGASFDRYLEDKPRVFKAIFPDTKRSQRLNEEEWRIHMLPIQ 182
+++TYSSR++T+IPLYESPGASFD YLEDKPRVF AIFPD +RSQ+LNEEEWRI MLPI
Sbjct: 4 NSATYSSRMTTDIPLYESPGASFDGYLEDKPRVFNAIFPDKRRSQQLNEEEWRIQMLPIN 63
Query: 183 FLYLTVVPVV 212
FL+LTV PVV
Sbjct: 64 FLFLTVWPVV 73
Score = 23.1 bits (48), Expect(2) = 7e-25
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 244 ITKVLELDIVSLQVSSVNKVLR 309
ITKVLELD++ ++ ++ + +
Sbjct: 94 ITKVLELDVIRWKLQGLDNIFQ 115
Score = 90.5 bits (223), Expect = 4e-16
Identities = 42/66 (63%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +2
Query: 344 LRWELQGLDDIVKPSHFSLDVKGAMYADRH-TKSRLKGQLQMSMSFVVPPVLALIPEDIR 520
+RW+LQGLD+I +PS FSL VKGA+Y DR ++RLKGQL+M++SFV+PPVLA++PE++R
Sbjct: 103 IRWKLQGLDNIFQPSQFSLGVKGALYPDRQGVRTRLKGQLEMNISFVLPPVLAMVPENVR 162
Query: 521 RGVAES 538
+ VAES
Sbjct: 163 QPVAES 168
>ref|NP_198769.1| uncharacterized protein [Arabidopsis thaliana]
gi|26452529|dbj|BAC43349.1| unknown protein [Arabidopsis
thaliana] gi|28973021|gb|AAO63835.1| unknown protein
[Arabidopsis thaliana] gi|332007061|gb|AED94444.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 239
Score = 104 bits (260), Expect(2) = 1e-20
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +3
Query: 9 STYSSRISTNIPLYESPGASFDRYLEDKPRVFKAIFPDTKRSQRLNEEEWRIHMLPIQFL 188
+TYSSR+ST+IPL ESP A FD YLEDK RVF+A+FPD RS RLNEEEWRI MLPI FL
Sbjct: 45 ATYSSRLSTDIPLNESPQALFDEYLEDKSRVFEAMFPDKPRSHRLNEEEWRIQMLPINFL 104
Query: 189 YLTVVPVV 212
+LTV PVV
Sbjct: 105 FLTVWPVV 112
Score = 21.6 bits (44), Expect(2) = 1e-20
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = +1
Query: 241 NITKVLELDIVSLQVSSVNKVL 306
+ITKVLEL+++ ++ +++V+
Sbjct: 132 DITKVLELNMMRWKLQGLDRVM 153
Score = 87.4 bits (215), Expect = 3e-15
Identities = 39/66 (59%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Frame = +2
Query: 344 LRWELQGLDDIVKPSHFSLDVKGAMYADRHTK-SRLKGQLQMSMSFVVPPVLALIPEDIR 520
+RW+LQGLD +++P+ FSL+VKGA+Y DR K +RL+GQL+M++SFV+PPVL L+PED+R
Sbjct: 142 MRWKLQGLDRVMEPADFSLEVKGALYPDRRGKHTRLRGQLEMNISFVLPPVLELVPEDVR 201
Query: 521 RGVAES 538
R +A +
Sbjct: 202 RNLANA 207