BLASTX nr result

ID: Bupleurum21_contig00011084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011084
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...    58   7e-07
ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...    56   3e-06
emb|CBI17659.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002273063.1| PREDICTED: zinc finger CCCH domain-containin...    56   3e-06

>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223549969|gb|EEF51456.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 445

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = +3

Query: 42  MLVCGSEDCSVRVFELPSLLYKGWMWMQSSKEVRLMCTGGNSLFFTGDSSGNVRIWKWQT 221
           +L+C   D SVR+ +LPS   +G ++  + +E+R + TG   LFFTGD +G VR+WKW  
Sbjct: 382 VLLCSCNDNSVRLLDLPSFSERGKIF--AKQEIRAIQTGPGGLFFTGDGTGQVRVWKWVA 439

Query: 222 SQVA 233
              A
Sbjct: 440 EPTA 443


>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           48-like [Cucumis sativus]
          Length = 432

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/62 (40%), Positives = 40/62 (64%)
 Frame = +3

Query: 42  MLVCGSEDCSVRVFELPSLLYKGWMWMQSSKEVRLMCTGGNSLFFTGDSSGNVRIWKWQT 221
           +L+C   D SVR+++LPS   +G ++  S +E+R +  G   +FFTGD +G V++W W T
Sbjct: 367 ILLCSCNDNSVRLYDLPSFSERGKIY--SKEEIRSIQAGPGGIFFTGDGTGQVKVWTWLT 424

Query: 222 SQ 227
            Q
Sbjct: 425 EQ 426


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
           vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +3

Query: 42  MLVCGSEDCSVRVFELPSLLYKGWMWMQSSKEVRLMCTGGNSLFFTGDSSGNVRIWKWQT 221
           +L+C   D +VRV++LPS   +G ++ +    +R +  G   LFFTGD SG VR+W W T
Sbjct: 379 VLLCSCNDNTVRVYDLPSFSERGKIFAREG--IRAIQIGPGGLFFTGDGSGQVRVWNWST 436

Query: 222 SQVA 233
              A
Sbjct: 437 EAAA 440


>emb|CBI17659.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%)
 Frame = +3

Query: 42  MLVCGSEDCSVRVFELPSLLYKGWMWMQSSKEVRLMCTGGNSLFFTGDSSGNVRIWKWQ 218
           +L+C   D SVR++ELPS   +  ++  + +EVR +  G   LFFTGD +G V IWKWQ
Sbjct: 382 ILLCSCNDNSVRLYELPSFTERARIF--AKEEVRAIQIGPGGLFFTGDGTGQVDIWKWQ 438


>ref|XP_002273063.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Vitis vinifera]
          Length = 468

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%)
 Frame = +3

Query: 42  MLVCGSEDCSVRVFELPSLLYKGWMWMQSSKEVRLMCTGGNSLFFTGDSSGNVRIWKWQ 218
           +L+C   D SVR++ELPS   +  ++  + +EVR +  G   LFFTGD +G V IWKWQ
Sbjct: 404 ILLCSCNDNSVRLYELPSFTERARIF--AKEEVRAIQIGPGGLFFTGDGTGQVDIWKWQ 460


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