BLASTX nr result

ID: Bupleurum21_contig00011049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011049
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284164.1| PREDICTED: cyclic nucleotide-gated ion chann...   108   6e-22
gb|AAX18166.2| CNGC2 [Gossypium hirsutum]                             104   6e-21
ref|XP_003621352.1| Cyclic nucleotide-gated ion channel [Medicag...   103   1e-20
ref|XP_002532894.1| Cyclic nucleotide-gated ion channel, putativ...   102   3e-20
ref|XP_003552549.1| PREDICTED: cyclic nucleotide-gated ion chann...   101   5e-20

>ref|XP_002284164.1| PREDICTED: cyclic nucleotide-gated ion channel 2 [Vitis vinifera]
           gi|296082976|emb|CBI22277.3| unnamed protein product
           [Vitis vinifera]
          Length = 701

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -1

Query: 363 NERLKRTARYYSSNWRTWAAVNIQLGWRRYMTRTR-PPVNHVTDNGSDGGSDSQWKLRQC 187
           NERLKRTARYYSSNWRTWAAVNIQL WRRY+ RTR  P   V +N   GGSD   +LRQC
Sbjct: 633 NERLKRTARYYSSNWRTWAAVNIQLAWRRYIIRTRGAPAIPVIEN---GGSDR--RLRQC 687

Query: 186 AAMFLSLRPHDHLE 145
           AAMF+SLRPHDHLE
Sbjct: 688 AAMFMSLRPHDHLE 701


>gb|AAX18166.2| CNGC2 [Gossypium hirsutum]
          Length = 715

 Score =  104 bits (260), Expect = 6e-21
 Identities = 51/73 (69%), Positives = 57/73 (78%)
 Frame = -1

Query: 363 NERLKRTARYYSSNWRTWAAVNIQLGWRRYMTRTRPPVNHVTDNGSDGGSDSQWKLRQCA 184
           NERLKRTARYYSSNWRTWAAVNIQLGWRRY TRTR P+    +N    G+ S  +L Q A
Sbjct: 647 NERLKRTARYYSSNWRTWAAVNIQLGWRRYRTRTRGPMISAAEN----GNSSDRRLLQYA 702

Query: 183 AMFLSLRPHDHLE 145
           AMF+S+RP DHLE
Sbjct: 703 AMFMSIRPQDHLE 715


>ref|XP_003621352.1| Cyclic nucleotide-gated ion channel [Medicago truncatula]
           gi|355496367|gb|AES77570.1| Cyclic nucleotide-gated ion
           channel [Medicago truncatula]
          Length = 710

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/73 (69%), Positives = 57/73 (78%)
 Frame = -1

Query: 363 NERLKRTARYYSSNWRTWAAVNIQLGWRRYMTRTRPPVNHVTDNGSDGGSDSQWKLRQCA 184
           NERLKRTARYYSSNWRTWAAVNIQL +RRY  RTR PV  V DNG      ++ +L Q A
Sbjct: 643 NERLKRTARYYSSNWRTWAAVNIQLAYRRYRQRTRGPVTPVRDNGG-----TERRLMQYA 697

Query: 183 AMFLSLRPHDHLE 145
           AMF+S+RPHDHLE
Sbjct: 698 AMFMSIRPHDHLE 710


>ref|XP_002532894.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223527328|gb|EEF29474.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 715

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/73 (71%), Positives = 57/73 (78%)
 Frame = -1

Query: 363 NERLKRTARYYSSNWRTWAAVNIQLGWRRYMTRTRPPVNHVTDNGSDGGSDSQWKLRQCA 184
           NERLKRTARYYSSNWRTWAAVNIQ  WRRY  RTR PV  VT    +GG+D   +L Q A
Sbjct: 647 NERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVIPVTT--ENGGTDR--RLLQYA 702

Query: 183 AMFLSLRPHDHLE 145
           AMF+S+RPHDHLE
Sbjct: 703 AMFMSIRPHDHLE 715


>ref|XP_003552549.1| PREDICTED: cyclic nucleotide-gated ion channel 2-like [Glycine max]
          Length = 714

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = -1

Query: 363 NERLKRTARYYSSNWRTWAAVNIQLGWRRYMTRTRPPVNHVTDNGSDGGSDSQWKLRQCA 184
           NERLKRTARYYSSNWRTWAAVNIQ  WRRY  RT+ PV  V D  ++GG++   +L Q A
Sbjct: 646 NERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTKGPVTPVRD--TNGGTER--RLLQYA 701

Query: 183 AMFLSLRPHDHLE 145
           AMF+S+RPHDHLE
Sbjct: 702 AMFMSIRPHDHLE 714


Top