BLASTX nr result
ID: Bupleurum21_contig00011028
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00011028 (1942 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20740.3| unnamed protein product [Vitis vinifera] 684 0.0 ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a... 673 0.0 gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata] 673 0.0 ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl... 620 e-175 gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h... 617 e-174 >emb|CBI20740.3| unnamed protein product [Vitis vinifera] Length = 1688 Score = 684 bits (1764), Expect = 0.0 Identities = 367/617 (59%), Positives = 439/617 (71%), Gaps = 17/617 (2%) Frame = -3 Query: 1940 LILEALTTMKCNESFSMERLELLGDSVLKYALSCDLFLRYPEKHEGQLSDCRTSAIRNST 1761 LILEA+TT++C+ESFSMERLELLGDSVLKYA+SC LFL+YP+KHEGQLS R+ + NST Sbjct: 1073 LILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNST 1132 Query: 1760 LHKFGIDKKIQGYIRDSPFDPRRWTAPGQQSIRLFPCDHGVDTSEVPVNSTFYTEDPKVM 1581 LHK G D+ +QGYIRD FDPRRW APGQ+SIR PC GVD EVP++ F TED K++ Sbjct: 1133 LHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIV 1192 Query: 1580 VGKCCDKGHRWMGSKTISDCVEALIGACYVGGGLFRSMQFMKWLGMDVELHLSLLDETIK 1401 VGK CD+GHRWMGSKTI+DCVEALIGA YVGGGL ++ MKW G+DVEL SL+DE I Sbjct: 1193 VGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIA 1252 Query: 1400 KASLYSYIPKLTEIEILESKLEYQFLVKGLLLEAITHGSDEQEVDSGYCYQRLEFLGDSV 1221 ASL +YIPK EIEILESK+ Y+F VKGLLLEAITH + EQE+ GYCYQRLEFLGDSV Sbjct: 1253 TASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHAT-EQELGVGYCYQRLEFLGDSV 1311 Query: 1220 LDILVTWYLYQSHKDIDPGELTDLRSASVNNETFAQAAVRRNXXXXXXXXXXXXSNQITE 1041 LD+L+TW+LYQSH+DIDPGELTDLRSASVNNE+FAQ AVRRN QI E Sbjct: 1312 LDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKE 1371 Query: 1040 FAQFVSASCSNTNTPQSATCPKALGDLVESIAGAILIDSKLNLDEVWRIFKPILSPIVTP 861 +A+++S S N QS PKALGDLVESIAGAILID+KLNL+EVWRIFKP+LSPIVTP Sbjct: 1372 YAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTP 1431 Query: 860 DKXXXXXXXXXXXLCDSLGLYIKDNCITIGAEFFAEVSVQLKDTLLIGEGFGQTRKAAKA 681 DK LCDSLG +IK+ C G AE+ +Q+ D LL+GEG G+ +KAAK Sbjct: 1432 DKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKG 1491 Query: 680 QAAVHLLKDLEDRGIS-------RRNQSEDPAVASSSVDLAIRSCNQSCPE---ALCKFP 531 QAA LLK+LE RGIS RR Q D SSS+++ +C QS E L KF Sbjct: 1492 QAAAQLLKNLEKRGISYSRSNSKRRKQGADLVGVSSSLNMGGDACGQSNNEDSSELIKF- 1550 Query: 530 SPKKRKTCDSQTPQAPSAYGGSKHNLL-------AIDPIDTKKGGPRTTLFDVCKRQQWP 372 KK+KT Q S N I I+ KKGGPR++L+++CKR QWP Sbjct: 1551 -HKKQKTTGMQLCTRTSIANNCLENACKPKLDTPVIKSINMKKGGPRSSLYELCKRLQWP 1609 Query: 371 RPIFETTEEKSRSPIEFNEGPEKRQGFNSFVSQITLTIPDHTDVVLSGHPQADKKSSYDS 192 P FE+ E++SR PI F EG E+R+GFNSF+S I+L IP+ + G +ADKKSS DS Sbjct: 1610 MPSFESKEQRSRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDS 1669 Query: 191 ACLAMLYELEQLGILTI 141 A L ML+EL++ G L I Sbjct: 1670 AALVMLHELQRRGKLII 1686 >ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera] Length = 1648 Score = 673 bits (1737), Expect = 0.0 Identities = 359/607 (59%), Positives = 430/607 (70%), Gaps = 7/607 (1%) Frame = -3 Query: 1940 LILEALTTMKCNESFSMERLELLGDSVLKYALSCDLFLRYPEKHEGQLSDCRTSAIRNST 1761 LILEA+TT++C+ESFSMERLELLGDSVLKYA+SC LFL+YP+KHEGQLS R+ + NST Sbjct: 1063 LILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNST 1122 Query: 1760 LHKFGIDKKIQGYIRDSPFDPRRWTAPGQQSIRLFPCDHGVDTSEVPVNSTFYTEDPKVM 1581 LHK G D+ +QGYIRD FDPRRW APGQ+SIR PC GVD EVP++ F TED K++ Sbjct: 1123 LHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIV 1182 Query: 1580 VGKCCDKGHRWMGSKTISDCVEALIGACYVGGGLFRSMQFMKWLGMDVELHLSLLDETIK 1401 VGK CD+GHRWMGSKTI+DCVEALIGA YVGGGL ++ MKW G+DVEL SL+DE I Sbjct: 1183 VGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIA 1242 Query: 1400 KASLYSYIPKLTEIEILESKLEYQFLVKGLLLEAITHGSDEQEVDSGYCYQRLEFLGDSV 1221 ASL +YIPK EIEILESK+ Y+F VKGLLLEAITH + EQE+ GYCYQRLEFLGDSV Sbjct: 1243 TASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHAT-EQELGVGYCYQRLEFLGDSV 1301 Query: 1220 LDILVTWYLYQSHKDIDPGELTDLRSASVNNETFAQAAVRRNXXXXXXXXXXXXSNQITE 1041 LD+L+TW+LYQSH+DIDPGELTDLRSASVNNE+FAQ AVRRN QI E Sbjct: 1302 LDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKE 1361 Query: 1040 FAQFVSASCSNTNTPQSATCPKALGDLVESIAGAILIDSKLNLDEVWRIFKPILSPIVTP 861 +A+++S S N QS PKALGDLVESIAGAILID+KLNL+EVWRIFKP+LSPIVTP Sbjct: 1362 YAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTP 1421 Query: 860 DKXXXXXXXXXXXLCDSLGLYIKDNCITIGAEFFAEVSVQLKDTLLIGEGFGQTRKAAKA 681 DK LCDSLG +IK+ C G AE+ +Q+ D LL+GEG G+ +KAAK Sbjct: 1422 DKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKG 1481 Query: 680 QAAVHLLKDLEDRGIS-------RRNQSEDPAVASSSVDLAIRSCNQSCPEALCKFPSPK 522 QAA LLK+LE RGIS RR Q D SSS+++ +C QS E Sbjct: 1482 QAAAQLLKNLEKRGISYSRSNSKRRKQGADLVGVSSSLNMGGDACGQSNNE--------- 1532 Query: 521 KRKTCDSQTPQAPSAYGGSKHNLLAIDPIDTKKGGPRTTLFDVCKRQQWPRPIFETTEEK 342 DS I I+ KKGGPR++L+++CKR QWP P FE+ E++ Sbjct: 1533 -----DSSE--------NYDFVFAVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQR 1579 Query: 341 SRSPIEFNEGPEKRQGFNSFVSQITLTIPDHTDVVLSGHPQADKKSSYDSACLAMLYELE 162 SR PI F EG E+R+GFNSF+S I+L IP+ + G +ADKKSS DSA L ML+EL+ Sbjct: 1580 SRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQ 1639 Query: 161 QLGILTI 141 + G L I Sbjct: 1640 RRGKLII 1646 >gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata] Length = 596 Score = 673 bits (1736), Expect = 0.0 Identities = 357/604 (59%), Positives = 434/604 (71%), Gaps = 10/604 (1%) Frame = -3 Query: 1919 TMKCNESFSMERLELLGDSVLKYALSCDLFLRYPEKHEGQLSDCRTSAIRNSTLHKFGID 1740 +++CNESFSMERLELLGDSVLKYA+SC LFL+YP+KHEGQLSD R+ A+ NSTLHK G Sbjct: 1 SLRCNESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSDQRSWAVSNSTLHKVGTS 60 Query: 1739 KKIQGYIRDSPFDPRRWTAPGQQSIRLFPCDHGVDTSEVPVNSTFYTEDPKVMVGKCCDK 1560 + +QGYIRD FDPRRWTAPGQ S+RL PCDHGV+TSEVP++ F TEDPKV+VGK CD+ Sbjct: 61 RHLQGYIRDGAFDPRRWTAPGQLSLRLCPCDHGVETSEVPLDKKFLTEDPKVVVGKHCDR 120 Query: 1559 GHRWMGSKT-ISDCVEALIGACYVGGGLFRSMQFMKWLGMDVELHLSLLDETIKKASLYS 1383 GHRWMGSKT ISDCVEALIGA YVGGG +++ MKWLG++ EL SL+++ IK A LYS Sbjct: 121 GHRWMGSKTIISDCVEALIGAYYVGGGFIAALKLMKWLGVEAELEPSLVEDAIKTAFLYS 180 Query: 1382 YIPKLTEIEILESKLEYQFLVKGLLLEAITHGSDEQEVDSGYCYQRLEFLGDSVLDILVT 1203 Y PK +IE LE KL Y+F VKGLLLEAITH + EVD Y YQRLEFLGDSVLDIL+T Sbjct: 181 YTPKAKDIEDLELKLSYKFSVKGLLLEAITHAT-VLEVDVSYNYQRLEFLGDSVLDILIT 239 Query: 1202 WYLYQSHKDIDPGELTDLRSASVNNETFAQAAVRRNXXXXXXXXXXXXSNQITEFAQFVS 1023 WYLYQ HKDIDPGELTDLRSASVNN+ FA AAV+R ++I+ F + VS Sbjct: 240 WYLYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHHSGYLESEISAFVKLVS 299 Query: 1022 ASCSNTNTPQSATCPKALGDLVESIAGAILIDSKLNLDEVWRIFKPILSPIVTPDKXXXX 843 SCS Q PK LGDLVESIAGAIL+D+KLNLDEVW+I KP+LSPIVTPDK Sbjct: 300 DSCS----LQGNKAPKVLGDLVESIAGAILVDTKLNLDEVWKIVKPLLSPIVTPDKLELP 355 Query: 842 XXXXXXXLCDSLGLYIKDNCITIGAEFFAEVSVQLKDTLLIGEGFGQTRKAAKAQAAVHL 663 LCDSLG ++KD+C+ G AE+ +QLKD LL+ EG GQTRK AK QAA+ L Sbjct: 356 PLRELIELCDSLGYFLKDHCMVKGDTVHAELRLQLKDELLVAEGCGQTRKNAKGQAALKL 415 Query: 662 LKDLEDRGISRRNQSEDPAVASSSVDLA-----IRSCNQSCPE-ALCKFPSPKKRKTCDS 501 LKDLE +GIS + + ++ ++ L N +CP A C KK+KT S Sbjct: 416 LKDLEHKGISSKKKKQETSLVDVPYSLGTDGDICSQANNTCPAMAPC-----KKQKTILS 470 Query: 500 QTPQA---PSAYGGSKHNLLAIDPIDTKKGGPRTTLFDVCKRQQWPRPIFETTEEKSRSP 330 A PS+ S ++ AI PI+ KKGGPR +L+++CK+ QWP P E+TE KS+S Sbjct: 471 NLETAKAQPSSACNSNKDIQAIGPINMKKGGPRQSLYELCKKLQWPMPSLESTERKSKSL 530 Query: 329 IEFNEGPEKRQGFNSFVSQITLTIPDHTDVVLSGHPQADKKSSYDSACLAMLYELEQLGI 150 E EG +KR+ +N+F SQI+LTIPD+ + L+G +ADKKSS DSA L MLYELE+ G Sbjct: 531 TECGEGSDKRKVYNTFASQISLTIPDYGLIELTGDERADKKSSQDSAALLMLYELERRGK 590 Query: 149 LTIG 138 + IG Sbjct: 591 VIIG 594 >ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 3a-like [Cucumis sativus] Length = 1639 Score = 620 bits (1599), Expect = e-175 Identities = 339/604 (56%), Positives = 404/604 (66%), Gaps = 4/604 (0%) Frame = -3 Query: 1940 LILEALTTMKCNESFSMERLELLGDSVLKYALSCDLFLRYPEKHEGQLSDCRTSAIRNST 1761 LILEALTT+ E+FS+ERLELLGDSVLKYA+SC LFL++PEKHEGQLS R I N+T Sbjct: 1059 LILEALTTLGSCENFSLERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNAT 1118 Query: 1760 LHKFGIDKKIQGYIRDSPFDPRRWTAPGQQSIRLFPCDHGVDTSEVPVNSTFYTEDPKVM 1581 LH G +QGYIRDS FDPRRW APGQ + R PC GVDT EVP++ F TEDPKV+ Sbjct: 1119 LHALGTKCGLQGYIRDSAFDPRRWVAPGQCTNRPVPCKCGVDTVEVPLHDKFCTEDPKVV 1178 Query: 1580 VGKCCDKGHRWMGSKTISDCVEALIGACYVGGGLFRSMQFMKWLGMDVELHLSLLDETIK 1401 +GKCCDKGHRW+ SKTI+DC EALIGA YV GG+ ++ MKWLG+DV L ++L+ + I Sbjct: 1179 LGKCCDKGHRWVVSKTIADCAEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVDAIT 1238 Query: 1400 KASLYSYIPKLTEIEILESKLEYQFLVKGLLLEAITHGSDEQEVDSGYCYQRLEFLGDSV 1221 ASL S TEI LESK+ Y F VKGLLLEA+TH SD QE+ YCYQRLEFLGDSV Sbjct: 1239 SASLRSCPLGDTEIATLESKIGYDFAVKGLLLEAVTHTSD-QEIGVNYCYQRLEFLGDSV 1297 Query: 1220 LDILVTWYLYQSHKDIDPGELTDLRSASVNNETFAQAAVRRNXXXXXXXXXXXXSNQITE 1041 LD+L+TW+ YQ++ DIDPGELTDLRSASVNNE FAQ AVRRN +QITE Sbjct: 1298 LDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITE 1357 Query: 1040 FAQFVSASCSNTNTPQSATCPKALGDLVESIAGAILIDSKLNLDEVWRIFKPILSPIVTP 861 + +++S S PK LGD+VESIAGAILID+KLNLDEVW+I+KP+L+P VTP Sbjct: 1358 YVKYLSESQDTGKPLHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTP 1417 Query: 860 DKXXXXXXXXXXXLCDSLGLYIKDNCITIGAEFFAEVSVQLKDTLLIGEGFGQTRKAAKA 681 DK LCDSLG +IKD C G F AE+ +QL+D+LLIGEG+ +TRKAA+ Sbjct: 1418 DKLELPPLRELIELCDSLGYFIKDKCTRKGETFHAELRLQLQDSLLIGEGYERTRKAARG 1477 Query: 680 QAAVHLLKDLEDRGISRRNQSEDPAVASSSVDLAIRSCNQSCPEALCKFPSPKKRKT--C 507 +AA LL LE RGIS R N S E+ PS T C Sbjct: 1478 EAAHRLLAQLETRGISYSRSGSKK-----------RKQNPSHDESAMVLPSSVNCSTDAC 1526 Query: 506 DS--QTPQAPSAYGGSKHNLLAIDPIDTKKGGPRTTLFDVCKRQQWPRPIFETTEEKSRS 333 D +TP I PI+ KKGGPR+TLF++CK+ QWP P F T E KSR Sbjct: 1527 DPNVETP--------------VIGPINLKKGGPRSTLFELCKKLQWPMPTFNTVENKSRV 1572 Query: 332 PIEFNEGPEKRQGFNSFVSQITLTIPDHTDVVLSGHPQADKKSSYDSACLAMLYELEQLG 153 IE EG EKR+GFNSF+S ITL IP+ V G +ADKKSS+DSA L ML EL+Q G Sbjct: 1573 QIEIGEGLEKRKGFNSFLSNITLQIPNAGYVECEGEARADKKSSFDSASLVMLQELQQQG 1632 Query: 152 ILTI 141 + I Sbjct: 1633 RVII 1636 >gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum] Length = 1655 Score = 617 bits (1591), Expect = e-174 Identities = 336/603 (55%), Positives = 409/603 (67%), Gaps = 3/603 (0%) Frame = -3 Query: 1940 LILEALTTMKCNESFSMERLELLGDSVLKYALSCDLFLRYPEKHEGQLSDCRTSAIRNST 1761 +ILEALTT++C ESFSMERLELLGDSVLKYA+SC LFLRYP KHEGQLS R+ A+ NST Sbjct: 1068 MILEALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNST 1127 Query: 1760 LHKFGIDKKIQGYIRDSPFDPRRWTAPGQQSIRLFPCDHGVDTSEVPVNSTFYTEDPKVM 1581 LHK G D KIQGYIRDS FDPRRW APGQ+ +R PC GVD+ EVP++ F TEDPKV Sbjct: 1128 LHKLGTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVK 1187 Query: 1580 VGKCCDKGHRWMGSKTISDCVEALIGACYVGGGLFRSMQFMKWLGMDVELHLSLLDETIK 1401 VGK CD+GHRW+ SKTISDCVEALIGA Y+ GGL ++ MKWLG+D EL ++ E I Sbjct: 1188 VGKSCDRGHRWLCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGIDAELDPLVVAEVIN 1247 Query: 1400 KASLYSYIPKLTEIEILESKLEYQFLVKGLLLEAITHGSDEQEVDSGYCYQRLEFLGDSV 1221 +ASL +Y+P EI ++ESK+ Y F VK L EA+TH + + YCYQRLEFLGDSV Sbjct: 1248 QASLRTYVPNY-EIHMIESKVGYNFSVKFFLQEALTH----ESLHESYCYQRLEFLGDSV 1302 Query: 1220 LDILVTWYLYQSHKDIDPGELTDLRSASVNNETFAQAAVRRNXXXXXXXXXXXXSNQITE 1041 LD+L+T YLY H +IDPGELTDLRSASVNNE FAQ AVR + SNQI+E Sbjct: 1303 LDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSNQISE 1362 Query: 1040 FAQFVSASCSNTNTPQSATCPKALGDLVESIAGAILIDSKLNLDEVWRIFKPILSPIVTP 861 + Q + S + T S PKALGDLVESI GAILID+ LNLD+VWRI +P+LSPIVTP Sbjct: 1363 YVQSFTESDNTTRLDPSIKGPKALGDLVESIVGAILIDTNLNLDKVWRIVEPLLSPIVTP 1422 Query: 860 DKXXXXXXXXXXXLCDSLGLYIKDNCITIGAEFFAEVSVQLKDTLLIGEGFGQTRKAAKA 681 DK LCDSLG +IK+ C G AE+ +QL LL+GEGF ++RK AK Sbjct: 1423 DKLELPPFRELNELCDSLGYFIKEKCKNKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKG 1482 Query: 680 QAAVHLLKDLEDRGISRRNQSEDPAVASSSVDLAIRSCNQSCPEALCKFP---SPKKRKT 510 +AA LLKDLE+RGISR+ + D SS + S + P+ + + +K Sbjct: 1483 KAASCLLKDLENRGISRKKRKHD--CVDSSQTMEDDSLEPTIPKRQRRAEIQLLDESKKA 1540 Query: 509 CDSQTPQAPSAYGGSKHNLLAIDPIDTKKGGPRTTLFDVCKRQQWPRPIFETTEEKSRSP 330 C S TP P I + TKKGGPRTTLF++CK+ WP P + TE KS +P Sbjct: 1541 C-SATPATP-----------VIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAP 1588 Query: 329 IEFNEGPEKRQGFNSFVSQITLTIPDHTDVVLSGHPQADKKSSYDSACLAMLYELEQLGI 150 +E EGPE+++GF SFVS+I L +P + + +G +ADKKSS DSA L MLYELEQ G Sbjct: 1589 MEIGEGPERKKGFISFVSKIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGK 1648 Query: 149 LTI 141 L I Sbjct: 1649 LII 1651