BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011014
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   450   e-124
ref|XP_002328702.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   421   e-115
ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...   421   e-115
ref|NP_176103.2| helicase associated domain-containing protein [...   418   e-114

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score =  450 bits (1158), Expect = e-124
 Identities = 225/327 (68%), Positives = 259/327 (79%)
 Frame = -1

Query: 1238 MMLYGGIFGCLSPILSISAFLSYKSPFVYPKDERHTVERAKLAXXXXXXXXXXXXXXSNR 1059
            MMLYG IFGCLSPILSISAFLSYKSPF+ PKDER  VERAKLA                R
Sbjct: 1133 MMLYGAIFGCLSPILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGAR 1192

Query: 1058 QSDHLVMMVAYRKWEKILRESGGKAAQRFCSSYFLSSAVMYMIRDMRIQFGTLLADIGLI 879
            QSDHLVMMVAY+KWE+IL E G KAAQ FC+SYFLSS+VM+MIRDMR+QFG LLADIGLI
Sbjct: 1193 QSDHLVMMVAYKKWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLI 1252

Query: 878  GFPKTYQQINGRRKDVLDSWFSDMSEPFNLNSNHYSVVRAILCAGLYPNVAAMEDGIAXX 699
              PK YQ I  ++K+ L+SWFSD+S+PFN  S+H+S+V+AILCAGLYPNVAA E GIA  
Sbjct: 1253 SLPKKYQ-IERKKKENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAATEQGIAGV 1311

Query: 698  XXXXXXXXXXXXSQGRPVWYDGKREVHIHPSSVNNNLKTVQHPFLVFLEKVETNRVFLRD 519
                        ++GRPVWYDG+REVHIHPSS+N NL   Q+PFLVFLEKVETN+VFLRD
Sbjct: 1312 ALGNIIQSSGSATKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLRD 1371

Query: 518  TTIISPYSILLFGGSVNLHHQTGLVTIDGWLKLKAPAQTAVLLKELRARLHSILKELIGK 339
            TTIISPYSILLFGGS+N+ HQ+G+V IDGWLKL APAQ AVL KELR  LHS+LKELI K
Sbjct: 1372 TTIISPYSILLFGGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIRK 1431

Query: 338  PQTRTIADNEVMRSIIHLLLEEDKPVK 258
            P+   + +NEV++SIIHLLLEE+K  K
Sbjct: 1432 PEKAIVVNNEVVKSIIHLLLEEEKSPK 1458


>ref|XP_002328702.1| predicted protein [Populus trichocarpa] gi|222839000|gb|EEE77351.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  436 bits (1122), Expect = e-120
 Identities = 218/325 (67%), Positives = 257/325 (79%)
 Frame = -1

Query: 1238 MMLYGGIFGCLSPILSISAFLSYKSPFVYPKDERHTVERAKLAXXXXXXXXXXXXXXSNR 1059
            M+LYG IFGCLSPILSISAFLSYKSPFVYPKDE+  VERAKLA              ++R
Sbjct: 1    MLLYGAIFGCLSPILSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDR 60

Query: 1058 QSDHLVMMVAYRKWEKILRESGGKAAQRFCSSYFLSSAVMYMIRDMRIQFGTLLADIGLI 879
             SDHL+MMVAY+KWEKIL E G KAAQ+FC++YFLSS+VM+MIRDMR QFGTLLADIGLI
Sbjct: 61   LSDHLLMMVAYKKWEKILSERGFKAAQQFCATYFLSSSVMHMIRDMRTQFGTLLADIGLI 120

Query: 878  GFPKTYQQINGRRKDVLDSWFSDMSEPFNLNSNHYSVVRAILCAGLYPNVAAMEDGIAXX 699
              PK+YQ +   +K+ LDSW S+ S+PFN+ S+H S+V+AILCAGLYPNVAA E GI   
Sbjct: 121  SIPKSYQ-VGRMKKENLDSWLSEKSQPFNMYSHHSSLVKAILCAGLYPNVAATELGITAA 179

Query: 698  XXXXXXXXXXXXSQGRPVWYDGKREVHIHPSSVNNNLKTVQHPFLVFLEKVETNRVFLRD 519
                         +  P+WYDG+REVHIHPSSVN N+K   HPFLVFLEKVETN+VFLRD
Sbjct: 180  TLNGLKQSSRPGKKDHPIWYDGRREVHIHPSSVNCNMKAFPHPFLVFLEKVETNKVFLRD 239

Query: 518  TTIISPYSILLFGGSVNLHHQTGLVTIDGWLKLKAPAQTAVLLKELRARLHSILKELIGK 339
            TTIISP+SILLFGG +N+ HQTGL+TIDGWLKLKA AQ AVL KELR+ LH++LKELI K
Sbjct: 240  TTIISPFSILLFGGEINIQHQTGLLTIDGWLKLKASAQYAVLFKELRSTLHALLKELIRK 299

Query: 338  PQTRTIADNEVMRSIIHLLLEEDKP 264
            P+  T+ DNEV++S+I LLL+EDKP
Sbjct: 300  PENATLVDNEVVKSMIQLLLDEDKP 324


>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score =  421 bits (1083), Expect = e-115
 Identities = 209/322 (64%), Positives = 252/322 (78%)
 Frame = -1

Query: 1238 MMLYGGIFGCLSPILSISAFLSYKSPFVYPKDERHTVERAKLAXXXXXXXXXXXXXXSNR 1059
            MMLYG +FGCLSPILS++AFLSYKSPFVYPKDER  VERAKL                +R
Sbjct: 1203 MMLYGAMFGCLSPILSVAAFLSYKSPFVYPKDERQNVERAKLTLLNDKLDGPGNTNDIDR 1262

Query: 1058 QSDHLVMMVAYRKWEKILRESGGKAAQRFCSSYFLSSAVMYMIRDMRIQFGTLLADIGLI 879
            QSDHL+MM AY++WE+IL E G KAAQ+FC+S+FLS +VM+MIR+MR+QFGTLLADIGLI
Sbjct: 1263 QSDHLLMMTAYKRWERILTEKGAKAAQKFCNSFFLSCSVMFMIREMRVQFGTLLADIGLI 1322

Query: 878  GFPKTYQQINGRRKDVLDSWFSDMSEPFNLNSNHYSVVRAILCAGLYPNVAAMEDGIAXX 699
              PK YQ+ N ++   LDSW SD+S+PFN+ ++H S+++AILCAGLYPNVAA E GI   
Sbjct: 1323 TLPKDYQK-NAKKIGSLDSWLSDVSQPFNIYAHHSSILKAILCAGLYPNVAAGEQGIVAA 1381

Query: 698  XXXXXXXXXXXXSQGRPVWYDGKREVHIHPSSVNNNLKTVQHPFLVFLEKVETNRVFLRD 519
                        S GR VW+DG+REVHIHPSS+NNN K  Q+PFLVFLEKVETN+VFLRD
Sbjct: 1382 VLSSLKQSSSSASSGRTVWFDGRREVHIHPSSINNNSKGFQYPFLVFLEKVETNKVFLRD 1441

Query: 518  TTIISPYSILLFGGSVNLHHQTGLVTIDGWLKLKAPAQTAVLLKELRARLHSILKELIGK 339
            T++ISPYSILLFGGS+++ HQTG + IDGWLKL APAQ AVL KELR  LHSILKELI K
Sbjct: 1442 TSVISPYSILLFGGSIDVLHQTGQLIIDGWLKLTAPAQIAVLFKELRLALHSILKELIRK 1501

Query: 338  PQTRTIADNEVMRSIIHLLLEE 273
            P+  T+ +NE+++SII LLLEE
Sbjct: 1502 PENATVLNNEIIKSIITLLLEE 1523


>ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Cucumis sativus]
          Length = 1642

 Score =  421 bits (1082), Expect = e-115
 Identities = 211/327 (64%), Positives = 255/327 (77%), Gaps = 1/327 (0%)
 Frame = -1

Query: 1238 MMLYGGIFGCLSPILSISAFLSYKSPFVYPKDERHTVERAKLAXXXXXXXXXXXXXXSNR 1059
            MMLYGGIFGCLS ILSISAFLSYKSPF+YPKDE+  VERAK A              +++
Sbjct: 1317 MMLYGGIFGCLSSILSISAFLSYKSPFIYPKDEKQNVERAKSALLSDEGNGSGESCGNDK 1376

Query: 1058 QSDHLVMMVAYRKWEKILRESGGKAAQRFCSSYFLSSAVMYMIRDMRIQFGTLLADIGLI 879
            QSDHL+M+ AY+KWEKIL + G KAAQ+FC S+FLSS+VMYMIRDMR+QFGTLLADIGL+
Sbjct: 1377 QSDHLIMVNAYKKWEKILHQKGAKAAQQFCKSHFLSSSVMYMIRDMRVQFGTLLADIGLV 1436

Query: 878  GFPKTYQQINGRR-KDVLDSWFSDMSEPFNLNSNHYSVVRAILCAGLYPNVAAMEDGIAX 702
              P   +   GR  K+ LDSWFSD S+PFN+ S+H S+V+A+LCAGLYPN+AA E+GI  
Sbjct: 1437 DLP--IRSCFGRTTKEDLDSWFSDSSQPFNMYSDHPSIVKAVLCAGLYPNIAAGEEGITE 1494

Query: 701  XXXXXXXXXXXXXSQGRPVWYDGKREVHIHPSSVNNNLKTVQHPFLVFLEKVETNRVFLR 522
                         +  RPV YDG+REV+IHPSSVN+NLK  Q+PF VFLEKVETN+VF+R
Sbjct: 1495 AALNSLGRSFGPATTARPVLYDGRREVYIHPSSVNSNLKAFQYPFHVFLEKVETNKVFIR 1554

Query: 521  DTTIISPYSILLFGGSVNLHHQTGLVTIDGWLKLKAPAQTAVLLKELRARLHSILKELIG 342
            DT+++SPYSILLFGGS+N+ HQ+G+V IDGWLKL APAQ AVL KELR  LHSILKELI 
Sbjct: 1555 DTSVVSPYSILLFGGSINIQHQSGIVIIDGWLKLTAPAQIAVLFKELRLTLHSILKELIR 1614

Query: 341  KPQTRTIADNEVMRSIIHLLLEEDKPV 261
            +P+T  I  NEV++SI+ LLLEEDKP+
Sbjct: 1615 RPETSIIIKNEVLKSIVRLLLEEDKPL 1641


>ref|NP_176103.2| helicase associated domain-containing protein [Arabidopsis thaliana]
            gi|332195372|gb|AEE33493.1| helicase associated
            domain-containing protein [Arabidopsis thaliana]
          Length = 1459

 Score =  418 bits (1074), Expect = e-114
 Identities = 210/325 (64%), Positives = 251/325 (77%)
 Frame = -1

Query: 1238 MMLYGGIFGCLSPILSISAFLSYKSPFVYPKDERHTVERAKLAXXXXXXXXXXXXXXSNR 1059
            M+LYGGIFGCLSPILSI+AFLSYKSPF+YPKDE+  V+R KLA              ++R
Sbjct: 1134 MLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDR 1193

Query: 1058 QSDHLVMMVAYRKWEKILRESGGKAAQRFCSSYFLSSAVMYMIRDMRIQFGTLLADIGLI 879
            QSDHL+MMVAY KW KIL+E G KAAQRFC S FLSS+VM MIRDMR+QFGTLLADIGLI
Sbjct: 1194 QSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLI 1253

Query: 878  GFPKTYQQINGRRKDVLDSWFSDMSEPFNLNSNHYSVVRAILCAGLYPNVAAMEDGIAXX 699
              PKT  + +GR+K+ LD WFSD ++PFN+ S    VV+AILCAGLYPN+AA + GI   
Sbjct: 1254 NLPKT-GEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITET 1312

Query: 698  XXXXXXXXXXXXSQGRPVWYDGKREVHIHPSSVNNNLKTVQHPFLVFLEKVETNRVFLRD 519
                         +    WYDG+REVHIHPSS+N+N K  Q+PFLVFLEKVETN+V+LRD
Sbjct: 1313 TFNSLTKQGNQT-KSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRD 1371

Query: 518  TTIISPYSILLFGGSVNLHHQTGLVTIDGWLKLKAPAQTAVLLKELRARLHSILKELIGK 339
            TTI+SP+SILLFGGS+N+HHQ+G VTIDGWLK+ APAQTAVL KELR  LHSILK+LI K
Sbjct: 1372 TTIVSPFSILLFGGSINVHHQSGSVTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRK 1431

Query: 338  PQTRTIADNEVMRSIIHLLLEEDKP 264
            P+   I  NEV++S++HLL+EE KP
Sbjct: 1432 PEKSGIVHNEVVKSMVHLLIEEGKP 1456