BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011009
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   227   1e-57
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              227   1e-57
emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]   215   4e-54
ref|XP_002330833.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-51
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   205   6e-51

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  227 bits (578), Expect = 1e-57
 Identities = 105/156 (67%), Positives = 130/156 (83%)
 Frame = -3

Query: 607  QHPRCKYIAKTIHGXXXXDISPDNQSVEQPKILGVKPGSDEKILLKHGPYGFYVQLGVDR 428
            QHP+CKYIAK + G    +++  +++ E+PK LG+ PGS EKILLK+GPYGFY+QLG DR
Sbjct: 1021 QHPKCKYIAKMLDGDDDEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDR 1080

Query: 427  KGYSPKRASVSQVKDTSSITLEDALEMLRYPVTLGEHPDDGHPIMLKLAKVGFSIKHRST 248
            KGY PKRASVS +KD  SITLEDALE+LRYPVTLG HP+D HP++LKLAK GFSI+HR T
Sbjct: 1081 KGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRT 1140

Query: 247  VSPVPKNMKPEDICLEKAVQILLSKDAKRSGRTKNK 140
            ++PVPKN+KP DI LEKA+++LL KD K+SGR KNK
Sbjct: 1141 IAPVPKNIKPNDITLEKALKLLLGKDVKQSGRPKNK 1176


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  227 bits (578), Expect = 1e-57
 Identities = 105/156 (67%), Positives = 130/156 (83%)
 Frame = -3

Query: 607  QHPRCKYIAKTIHGXXXXDISPDNQSVEQPKILGVKPGSDEKILLKHGPYGFYVQLGVDR 428
            QHP+CKYIAK + G    +++  +++ E+PK LG+ PGS EKILLK+GPYGFY+QLG DR
Sbjct: 853  QHPKCKYIAKMLDGDDDEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDR 912

Query: 427  KGYSPKRASVSQVKDTSSITLEDALEMLRYPVTLGEHPDDGHPIMLKLAKVGFSIKHRST 248
            KGY PKRASVS +KD  SITLEDALE+LRYPVTLG HP+D HP++LKLAK GFSI+HR T
Sbjct: 913  KGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRT 972

Query: 247  VSPVPKNMKPEDICLEKAVQILLSKDAKRSGRTKNK 140
            ++PVPKN+KP DI LEKA+++LL KD K+SGR KNK
Sbjct: 973  IAPVPKNIKPNDITLEKALKLLLGKDVKQSGRPKNK 1008


>emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]
          Length = 672

 Score =  215 bits (548), Expect = 4e-54
 Identities = 100/151 (66%), Positives = 126/151 (83%)
 Frame = -3

Query: 592 KYIAKTIHGXXXXDISPDNQSVEQPKILGVKPGSDEKILLKHGPYGFYVQLGVDRKGYSP 413
           +YIAK + G    +++  +++ E+PK+LG+ PGS EKILLK+GPYGFY+QLG DRKGY P
Sbjct: 50  RYIAKMLDGDDDEEVASQDKTFEEPKVLGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLP 109

Query: 412 KRASVSQVKDTSSITLEDALEMLRYPVTLGEHPDDGHPIMLKLAKVGFSIKHRSTVSPVP 233
           KRASVS +KD  SITLEDALE+LRYPVTLG HP+D HP++LKLAK GFSI+HR T++PVP
Sbjct: 110 KRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVP 169

Query: 232 KNMKPEDICLEKAVQILLSKDAKRSGRTKNK 140
           KN+KP DI LEKA+++LL KD K+SGR KNK
Sbjct: 170 KNIKPNDITLEKALKLLLGKDVKQSGRPKNK 200


>ref|XP_002330833.1| predicted protein [Populus trichocarpa] gi|222872635|gb|EEF09766.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  205 bits (522), Expect = 4e-51
 Identities = 92/156 (58%), Positives = 126/156 (80%)
 Frame = -3

Query: 607 QHPRCKYIAKTIHGXXXXDISPDNQSVEQPKILGVKPGSDEKILLKHGPYGFYVQLGVDR 428
           QHP CKYIAKT++G    + +P + SV++PK+LGV P S+EK+LLK+GPYG+YVQLG DR
Sbjct: 89  QHPNCKYIAKTLYGDDEKEETPQSSSVDEPKLLGVHPTSNEKVLLKNGPYGYYVQLGEDR 148

Query: 427 KGYSPKRASVSQVKDTSSITLEDALEMLRYPVTLGEHPDDGHPIMLKLAKVGFSIKHRST 248
           KGY+PKR+SVS +KD  +IT E AL +LRYP+TLG+HP DG+P+M+KL K G+++KHR T
Sbjct: 149 KGYAPKRSSVSHIKDVGAITHEVALNLLRYPLTLGDHPKDGYPVMIKLGKGGYTVKHRRT 208

Query: 247 VSPVPKNMKPEDICLEKAVQILLSKDAKRSGRTKNK 140
           ++ VPKN+KPE I +EKA+++L  K+   SGR K+K
Sbjct: 209 MASVPKNLKPEKITMEKALELLSGKNVSHSGRPKSK 244


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223532629|gb|EEF34415.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  205 bits (521), Expect = 6e-51
 Identities = 95/145 (65%), Positives = 120/145 (82%)
 Frame = -3

Query: 574  IHGXXXXDISPDNQSVEQPKILGVKPGSDEKILLKHGPYGFYVQLGVDRKGYSPKRASVS 395
            I+G    + +P N SVE+PK+LGV P S EK+LLK+GPYGFY+QLG DRKGY+PKRASVS
Sbjct: 917  IYGDDEDEETPQNNSVEEPKLLGVHPVSTEKVLLKNGPYGFYLQLGEDRKGYTPKRASVS 976

Query: 394  QVKDTSSITLEDALEMLRYPVTLGEHPDDGHPIMLKLAKVGFSIKHRSTVSPVPKNMKPE 215
             +KD  +ITLEDALE+LRYPVTLG HP DGHPI+LKLAKVGF+++HR T++ VPKNMKP+
Sbjct: 977  HIKDVDNITLEDALELLRYPVTLGNHPKDGHPIILKLAKVGFAVRHRRTIASVPKNMKPD 1036

Query: 214  DICLEKAVQILLSKDAKRSGRTKNK 140
            ++ LEKA+++L   D +RSGR K K
Sbjct: 1037 NVSLEKALELLSGDDVRRSGRPKRK 1061