BLASTX nr result

ID: Bupleurum21_contig00010996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010996
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...    82   3e-14
ref|XP_002312245.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003556812.1| PREDICTED: uncharacterized protein LOC100817...    77   1e-12
ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250...    76   2e-12

>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 50/97 (51%), Positives = 54/97 (55%)
 Frame = -1

Query: 334 ASGASFFRSXXXXXXXXXXLRHAXXXXXXXXXXDASNFFTLFLLRATGFLLPCYIMAWAI 155
           ASGA+F RS          LRHA          D S FF+LFLLRA GFLLPCYIMAWAI
Sbjct: 175 ASGAAFCRSAALILMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWAI 234

Query: 154 SIMXXXXXXXXXXXXATTPFAFVLQSRTPRGLHLTLA 44
           SI+            A T  AFVLQS   RGLH T+A
Sbjct: 235 SILQRRRQRQEAAALAATQVAFVLQSGQHRGLHFTIA 271


>ref|XP_002312245.1| predicted protein [Populus trichocarpa] gi|222852065|gb|EEE89612.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/97 (50%), Positives = 53/97 (54%)
 Frame = -1

Query: 334 ASGASFFRSXXXXXXXXXXLRHAXXXXXXXXXXDASNFFTLFLLRATGFLLPCYIMAWAI 155
           ASGA+F RS          LRHA          D S FF+LFLLRA GFLLPCYIMAWAI
Sbjct: 172 ASGAAFCRSVALILMALLLLRHALTLTDSDADDDVSTFFSLFLLRAAGFLLPCYIMAWAI 231

Query: 154 SIMXXXXXXXXXXXXATTPFAFVLQSRTPRGLHLTLA 44
           SI+            A T  AFVLQS   RGL  T+A
Sbjct: 232 SILQRRRQRQEAAALAATQVAFVLQSGQQRGLQFTIA 268


>ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|222864092|gb|EEF01223.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 49/97 (50%), Positives = 53/97 (54%)
 Frame = -1

Query: 334 ASGASFFRSXXXXXXXXXXLRHAXXXXXXXXXXDASNFFTLFLLRATGFLLPCYIMAWAI 155
           ASGA+F RS          LRHA          D S FF+LFLLRA GFLLPCYIMAWAI
Sbjct: 172 ASGAAFCRSVALILMALLLLRHALTATDSDGEDDVSAFFSLFLLRAAGFLLPCYIMAWAI 231

Query: 154 SIMXXXXXXXXXXXXATTPFAFVLQSRTPRGLHLTLA 44
           SI+            A T  AFVLQS   RGL  T+A
Sbjct: 232 SILQRRRQRQEAAALAATQVAFVLQSGQQRGLQFTIA 268


>ref|XP_003556812.1| PREDICTED: uncharacterized protein LOC100817542 [Glycine max]
          Length = 286

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/97 (49%), Positives = 52/97 (53%)
 Frame = -1

Query: 334 ASGASFFRSXXXXXXXXXXLRHAXXXXXXXXXXDASNFFTLFLLRATGFLLPCYIMAWAI 155
           ASGA+F RS          LRHA          D S FF+LFLLRA GFLLPCYIMAWAI
Sbjct: 176 ASGAAFCRSVALILMALLLLRHALSVTDSDAEDDPSTFFSLFLLRAAGFLLPCYIMAWAI 235

Query: 154 SIMXXXXXXXXXXXXATTPFAFVLQSRTPRGLHLTLA 44
           SI+            A T  AFVLQS   RGL   +A
Sbjct: 236 SILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIA 272


>ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera]
           gi|297733975|emb|CBI15222.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 49/98 (50%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = -1

Query: 334 ASGASFFRSXXXXXXXXXXLRHAXXXXXXXXXXDASNFFTLFLLRATGFLLPCYIMAWAI 155
           ASGA+F RS          LRHA          DASNFF+LFLLRA GFLLPCYIMAWAI
Sbjct: 181 ASGAAFCRSAALILMALLLLRHALNITNADGDDDASNFFSLFLLRAAGFLLPCYIMAWAI 240

Query: 154 SIM-XXXXXXXXXXXXATTPFAFVLQSRTPRGLHLTLA 44
           SI+             A T  AF+LQ+   RGL  T+A
Sbjct: 241 SILQRRRQRQEAAAALAATEVAFMLQAGQHRGLQFTIA 278


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