BLASTX nr result

ID: Bupleurum21_contig00010987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010987
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632305.1| PREDICTED: uncharacterized protein LOC100855...   104   8e-21
emb|CBI26269.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002282665.1| PREDICTED: uncharacterized protein LOC100256...   103   1e-20
ref|XP_002312535.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002336405.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20

>ref|XP_003632305.1| PREDICTED: uncharacterized protein LOC100855206 [Vitis vinifera]
          Length = 166

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 8/90 (8%)
 Frame = -3

Query: 248 MKVHPAPKKRNITFRYEIPSSLF--------QKKLRRLPHIFEKVIELPFHSDADVSIQE 93
           MK +P PKKR+I+ +Y+I S+L         QKKLRRLPHIF +V+ELPF SDADVS+ E
Sbjct: 1   MKANPTPKKRSISLQYDIVSTLSEANRLVSSQKKLRRLPHIFTRVLELPFRSDADVSVTE 60

Query: 92  TSDSLRFIVNTDDDIGDDITAQTVEIYPGV 3
           T D LRF V T DD+GDD+  QT++++PGV
Sbjct: 61  TPDHLRFAVTT-DDVGDDVRTQTIQLHPGV 89


>emb|CBI26269.3| unnamed protein product [Vitis vinifera]
          Length = 213

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/93 (62%), Positives = 67/93 (72%), Gaps = 11/93 (11%)
 Frame = -3

Query: 248 MKVHPAPKKRNITFRYEIPSSLF-----------QKKLRRLPHIFEKVIELPFHSDADVS 102
           MKVHP  KKRNITFRYEI S+L            QKKLRRLPHIF +V+ELPF SDADV+
Sbjct: 53  MKVHPVQKKRNITFRYEINSNLSDPLRDRLMGSTQKKLRRLPHIFSRVLELPFKSDADVA 112

Query: 101 IQETSDSLRFIVNTDDDIGDDITAQTVEIYPGV 3
           ++E+SD  RF+  T D IG DI A TVEI+PGV
Sbjct: 113 VEESSDCFRFVAVT-DGIG-DIRAHTVEIHPGV 143


>ref|XP_002282665.1| PREDICTED: uncharacterized protein LOC100256202 [Vitis vinifera]
          Length = 168

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/93 (62%), Positives = 67/93 (72%), Gaps = 11/93 (11%)
 Frame = -3

Query: 248 MKVHPAPKKRNITFRYEIPSSLF-----------QKKLRRLPHIFEKVIELPFHSDADVS 102
           MKVHP  KKRNITFRYEI S+L            QKKLRRLPHIF +V+ELPF SDADV+
Sbjct: 1   MKVHPVQKKRNITFRYEINSNLSDPLRDRLMGSTQKKLRRLPHIFSRVLELPFKSDADVA 60

Query: 101 IQETSDSLRFIVNTDDDIGDDITAQTVEIYPGV 3
           ++E+SD  RF+  T D IG DI A TVEI+PGV
Sbjct: 61  VEESSDCFRFVAVT-DGIG-DIRAHTVEIHPGV 91


>ref|XP_002312535.1| predicted protein [Populus trichocarpa] gi|222852355|gb|EEE89902.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = -3

Query: 248 MKVHPAPKKRNITFR-YEIPSSL--FQ-KKLRRLPHIFEKVIELPFHSDADVSIQETSDS 81
           MKVHP PKKRNIT + Y + SS   FQ KKLRRLPHIF +++ELPF SDADVS++E  D 
Sbjct: 1   MKVHPLPKKRNITIQFYPLTSSAGGFQNKKLRRLPHIFSRILELPFRSDADVSVEENPDC 60

Query: 80  LRFIVNTDDDIGDDITAQTVEIYPGV 3
            RF+  TDD+IG D+ A TVEI+PGV
Sbjct: 61  FRFVAETDDNIG-DMRAHTVEIHPGV 85


>ref|XP_002336405.1| predicted protein [Populus trichocarpa] gi|222834920|gb|EEE73369.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
 Frame = -3

Query: 248 MKVHPAPKKRNITFR-YEIPSSLF---QKKLRRLPHIFEKVIELPFHSDADVSIQETSDS 81
           MKVHP PKKRNIT + Y + SS      KKLRRLPHIF +++ELPF SDADVS++E  D 
Sbjct: 1   MKVHPLPKKRNITIQFYPLTSSAGGSQNKKLRRLPHIFSRILELPFRSDADVSVEENPDC 60

Query: 80  LRFIVNTDDDIGDDITAQTVEIYPGV 3
            RF+  TDD+IG D+ A TVEI+PGV
Sbjct: 61  FRFVAETDDNIG-DMRAHTVEIHPGV 85


Top