BLASTX nr result

ID: Bupleurum21_contig00010971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010971
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33475.1| transcription activator [Pimpinella brachycarpa]       152   3e-35
gb|AGD88523.1| SOC1 [Prunus salicina]                                  93   2e-17
gb|ACO40488.1| SOC1 [Prunus armeniaca] gi|444230590|gb|AGD88524....    93   3e-17
gb|AEO20229.1| SOC1-like protein [Prunus mume]                         93   3e-17
gb|ACZ26527.1| suppressor of overexpression of CO 1 [Vitis vinif...    93   3e-17

>gb|AAC33475.1| transcription activator [Pimpinella brachycarpa]
          Length = 217

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/104 (75%), Positives = 87/104 (83%)
 Frame = +1

Query: 1   GLGSCSINELQQIERQLEKSVSAVRARKMQVFXXXXXXXXXXXXNLAADNALLIAKYEIQ 180
           GLG+CSINELQQIE+QLEKSV  VRARKMQVF             LAADNA+L+AKY++Q
Sbjct: 115 GLGTCSINELQQIEQQLEKSVCTVRARKMQVFKEQIEQLKEKEKTLAADNAILLAKYDVQ 174

Query: 181 PRQESPEDRGNITSTTENSEENSDVETELFIGPPEKRFKRILDK 312
           PRQESPED GN+TSTTENS ENSDVETELFIGPPEKRFKRI++K
Sbjct: 175 PRQESPEDGGNLTSTTENS-ENSDVETELFIGPPEKRFKRIMEK 217


>gb|AGD88523.1| SOC1 [Prunus salicina]
          Length = 215

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/101 (56%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   GLGSCSINELQQIERQLEKSVSAVRARKMQVFXXXXXXXXXXXXNLAADNALLIAKY-EI 177
           GLGSC+I ELQ+IE+QLE+SVS VRARK QVF             LAA+N  LI K   I
Sbjct: 117 GLGSCTIEELQEIEQQLERSVSNVRARKTQVFKEQIEQLKEKGKALAAENERLIEKCGRI 176

Query: 178 QPRQESPEDRGNITSTTENSEENSDVETELFIGPPEKRFKR 300
           QPRQ S E R N+      S  +SDVETELFIG PE+R KR
Sbjct: 177 QPRQASNEQRENLAYI--ESSPSSDVETELFIGLPERRMKR 215


>gb|ACO40488.1| SOC1 [Prunus armeniaca] gi|444230590|gb|AGD88524.1| SOC1 [Prunus
           armeniaca]
          Length = 214

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/98 (58%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   GLGSCSINELQQIERQLEKSVSAVRARKMQVFXXXXXXXXXXXXNLAADNALLIAKY-EI 177
           GLGSCSI ELQ+IE+QLE+SVS VRARK QVF             LAA+N  LI K   I
Sbjct: 117 GLGSCSIEELQEIEQQLERSVSNVRARKTQVFKEQIEQLREKGKALAAENERLIEKCGRI 176

Query: 178 QPRQESPEDRGNITSTTENSEENSDVETELFIGPPEKR 291
           QPRQ S E R N+  T   S  +SDVETELFIG PE+R
Sbjct: 177 QPRQASNEQRENLAYT--ESSPSSDVETELFIGLPERR 212


>gb|AEO20229.1| SOC1-like protein [Prunus mume]
          Length = 214

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/98 (58%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   GLGSCSINELQQIERQLEKSVSAVRARKMQVFXXXXXXXXXXXXNLAADNALLIAKY-EI 177
           GLGSCSI ELQ+IE+QLE+SVS VRARK QVF             LAA+N  LI K   I
Sbjct: 117 GLGSCSIEELQEIEQQLERSVSNVRARKTQVFKEQIEQLREKGKALAAENEKLIEKCGRI 176

Query: 178 QPRQESPEDRGNITSTTENSEENSDVETELFIGPPEKR 291
           QPRQ S E R N+  T   S  +SDVETELFIG PE+R
Sbjct: 177 QPRQASNEQRENLAFT--ESSPSSDVETELFIGLPERR 212


>gb|ACZ26527.1| suppressor of overexpression of CO 1 [Vitis vinifera]
          Length = 218

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 53/102 (51%), Positives = 66/102 (64%)
 Frame = +1

Query: 1   GLGSCSINELQQIERQLEKSVSAVRARKMQVFXXXXXXXXXXXXNLAADNALLIAKYEIQ 180
           GLGSCSI ELQQIE+QLE+SVS++RARK QVF             LAA+NA+L  K  +Q
Sbjct: 116 GLGSCSIEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAAENAMLCEKCGVQ 175

Query: 181 PRQESPEDRGNITSTTENSEENSDVETELFIGPPEKRFKRIL 306
           P Q   ++  N T  +    +NSDV T+LFIG PE R KR+L
Sbjct: 176 PYQAPNQE--NETLPSAERSQNSDVSTDLFIGLPEGRAKRLL 215


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