BLASTX nr result

ID: Bupleurum21_contig00010966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010966
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 ...   493   e-137
ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus ...   484   e-134
ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...   478   e-132
ref|XP_002320347.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
ref|XP_003554523.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...   471   e-130

>ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 [Vitis vinifera]
            gi|297743873|emb|CBI36843.3| unnamed protein product
            [Vitis vinifera]
          Length = 324

 Score =  493 bits (1268), Expect = e-137
 Identities = 238/335 (71%), Positives = 270/335 (80%), Gaps = 1/335 (0%)
 Frame = -3

Query: 1140 MKFCKRYEEYMQGQDHKKLPGVGFXXXXXXXXKCRTEEEEEFHQIHSQNXXXXXXXXXXX 961
            MKFCK+Y+EYMQ Q+ KKLPGVGF        +CR + + +                   
Sbjct: 1    MKFCKKYQEYMQAQE-KKLPGVGFKKLKKILKRCRRDLQIQ----------KGLEGVVDI 49

Query: 960  STCPNHCSVCDGTFFPSLLNEMSAVVGSFNERAQKLLELHLASGVHKCFIWFKDKLQGNH 781
             TCP+HC VCDGTFFPSLL EMS +VG FNERAQKLL+LHLASGV K +IWFK KLQGNH
Sbjct: 50   PTCPHHCQVCDGTFFPSLLKEMSEIVGCFNERAQKLLDLHLASGVRKYYIWFKGKLQGNH 109

Query: 780  VALVEEGKDLVGYAIINAIAMRKILKKYDKIHYSNQSQAFKSKVQSLHIEILQSPWLCEL 601
            VAL++EGKDLV YA+INA A+RKILKKYDK+HYS Q QAFKS+ QS+H+EILQSPWLCEL
Sbjct: 110  VALIQEGKDLVTYAMINATAIRKILKKYDKVHYSKQGQAFKSQAQSMHMEILQSPWLCEL 169

Query: 600  MAFHINLRETKAKKRKTPISFDGCSLVFNEGKPSLSCDL-DSIKIDIDLTCPICLDIVFD 424
            MAFHINLRE+KAK RK P  FDGCSL FN+GKPSLSC+L DS+K+DIDLTC ICLD VFD
Sbjct: 170  MAFHINLRESKAKSRKAPALFDGCSLTFNDGKPSLSCELFDSVKLDIDLTCSICLDTVFD 229

Query: 423  PVSLTCGHIFCYTCACKAASVTIVDGLKEAESREKCALCREAGVYKGAAHLEELNILLSR 244
            PVSLTCGHIFCY CAC AASVTIVDGLK AE +EKC LCREAGVY+GA HLEELNILLSR
Sbjct: 230  PVSLTCGHIFCYMCACSAASVTIVDGLKIAEPKEKCPLCREAGVYEGAVHLEELNILLSR 289

Query: 243  SCPQYWEERRQAERVERMKQAKEHWETECRLFTGV 139
            SC +YWE+R Q ER ER++QAKEHWE++CR F GV
Sbjct: 290  SCHEYWEQRLQTERTERIRQAKEHWESQCRAFMGV 324


>ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223537629|gb|EEF39252.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 330

 Score =  484 bits (1245), Expect = e-134
 Identities = 242/337 (71%), Positives = 273/337 (81%), Gaps = 3/337 (0%)
 Frame = -3

Query: 1140 MKFCKRYEEYMQGQDHKKLPGVGFXXXXXXXXKCRTEEEEEFHQIHSQNXXXXXXXXXXX 961
            MKFCK Y+EYMQ Q+ K+LPG+GF        KCR + E   HQ    N           
Sbjct: 1    MKFCKTYQEYMQNQE-KELPGLGFKKLKKILKKCRKDLES--HQQLDNNGSPSAHVQH-- 55

Query: 960  STCPNHCSVCDGTFFPSLLNEMSAVVGSFNERAQKLLELHLASGVHKCFIWFKDKLQGNH 781
              CP+HC VCDGTFFPSLLNEMSA+VG FNERAQKLLELHLASGV K F+WFK KL+GNH
Sbjct: 56   --CPHHCPVCDGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGVRKYFMWFKGKLKGNH 113

Query: 780  VALVEEGKDLVGYAIINAIAMRKILKKYDKIHYSNQSQAFKSKVQSLHIEILQSPWLCEL 601
            VAL++EGKDLV YA+IN+IA+RKILKKYDKIHYSNQ QAF+S+ QS+HIEILQSPWLCEL
Sbjct: 114  VALMQEGKDLVTYALINSIAVRKILKKYDKIHYSNQGQAFRSQAQSMHIEILQSPWLCEL 173

Query: 600  MAFHINLRETKAKKR-KTPISFDGCSLVF-NEGKPSLSCDL-DSIKIDIDLTCPICLDIV 430
            MAFHINLRETK K R K P  FDGCSL F ++ KPSLSC+L DS+K+DIDLTC ICLD V
Sbjct: 174  MAFHINLRETKIKSRTKVPALFDGCSLTFDDDDKPSLSCELFDSVKLDIDLTCSICLDTV 233

Query: 429  FDPVSLTCGHIFCYTCACKAASVTIVDGLKEAESREKCALCREAGVYKGAAHLEELNILL 250
            FDPVSLTCGHIFCY CAC AASVTIVDGL+ AE +EKC LCREAGV +GA HLEELNILL
Sbjct: 234  FDPVSLTCGHIFCYMCACSAASVTIVDGLRAAEPKEKCPLCREAGVNEGAVHLEELNILL 293

Query: 249  SRSCPQYWEERRQAERVERMKQAKEHWETECRLFTGV 139
            SRSCP+YWE+R Q+ERVER++QAKEHWE +CR F GV
Sbjct: 294  SRSCPEYWEQRLQSERVERIRQAKEHWEFQCRAFMGV 330


>ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform 1 [Glycine
            max]
          Length = 324

 Score =  478 bits (1231), Expect = e-132
 Identities = 232/335 (69%), Positives = 265/335 (79%), Gaps = 1/335 (0%)
 Frame = -3

Query: 1140 MKFCKRYEEYMQGQDHKKLPGVGFXXXXXXXXKCRTEEEEEFHQIHSQNXXXXXXXXXXX 961
            MKFCK+Y+EYMQGQ+ KKLPGVGF        KCR     +   +H+             
Sbjct: 1    MKFCKKYQEYMQGQE-KKLPGVGFKKLKKILKKCRRNSSSQ-KPLHAS---------LAA 49

Query: 960  STCPNHCSVCDGTFFPSLLNEMSAVVGSFNERAQKLLELHLASGVHKCFIWFKDKLQGNH 781
             TCP+HC VCDGTFFPSLLNEMS +VG FN+RAQKLLELHLASGV K F+W K KLQGNH
Sbjct: 50   KTCPDHCPVCDGTFFPSLLNEMSDIVGCFNQRAQKLLELHLASGVRKYFLWIKGKLQGNH 109

Query: 780  VALVEEGKDLVGYAIINAIAMRKILKKYDKIHYSNQSQAFKSKVQSLHIEILQSPWLCEL 601
             AL++EGKDLV YA+INAIA+RKILKKYDKIHYS Q Q FKS++QS+H EILQSPWLCEL
Sbjct: 110  TALIQEGKDLVTYALINAIAIRKILKKYDKIHYSKQGQLFKSQIQSMHKEILQSPWLCEL 169

Query: 600  MAFHINLRETKAKKRKTPISFDGCSLVFNEGKPSLSCDL-DSIKIDIDLTCPICLDIVFD 424
            MAFHINLRETK K RK    FDGCSL F +GKP+L+C+L DSIK+DIDLTC ICLD VFD
Sbjct: 170  MAFHINLRETKVKSRKAHALFDGCSLTFKDGKPALTCELFDSIKVDIDLTCSICLDTVFD 229

Query: 423  PVSLTCGHIFCYTCACKAASVTIVDGLKEAESREKCALCREAGVYKGAAHLEELNILLSR 244
            PVSLTCGHIFCY CAC AASV+IV+GLK A+ + KC LCRE  VY+GA HLEELNILLSR
Sbjct: 230  PVSLTCGHIFCYICACSAASVSIVNGLKSADPKMKCPLCREGAVYEGAVHLEELNILLSR 289

Query: 243  SCPQYWEERRQAERVERMKQAKEHWETECRLFTGV 139
            SC +YWE+R Q ERVER+KQ KEHW+++CR F GV
Sbjct: 290  SCQEYWEQRIQTERVERVKQIKEHWDSQCRAFVGV 324


>ref|XP_002320347.1| predicted protein [Populus trichocarpa] gi|222861120|gb|EEE98662.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  473 bits (1217), Expect = e-131
 Identities = 233/335 (69%), Positives = 265/335 (79%), Gaps = 1/335 (0%)
 Frame = -3

Query: 1140 MKFCKRYEEYMQGQDHKKLPGVGFXXXXXXXXKCRTEEEEEFHQIHSQNXXXXXXXXXXX 961
            MKFCK+Y+EYMQGQ  K+LPGV F        KCR + E   HQ H              
Sbjct: 1    MKFCKKYQEYMQGQQ-KQLPGVDFKKLKKILKKCRKDFES--HQDHDGQ----------- 46

Query: 960  STCPNHCSVCDGTFFPSLLNEMSAVVGSFNERAQKLLELHLASGVHKCFIWFKDKLQGNH 781
             +CP+HC VCDGTFFPSL+ EMSAVVG FN+RAQKLLELHLASG  K F+WF+ +LQ +H
Sbjct: 47   -SCPHHCPVCDGTFFPSLVKEMSAVVGCFNKRAQKLLELHLASGFRKYFMWFQGRLQKDH 105

Query: 780  VALVEEGKDLVGYAIINAIAMRKILKKYDKIHYSNQSQAFKSKVQSLHIEILQSPWLCEL 601
             AL++EGKDLV YA+INAIA+RKILKKYDKIHYS Q QAFKSK QS+HIEILQSPWLCEL
Sbjct: 106  AALIQEGKDLVTYALINAIAVRKILKKYDKIHYSKQGQAFKSKAQSMHIEILQSPWLCEL 165

Query: 600  MAFHINLRETKAKKRKTPISFDGCSLVFNEGKPSLSCDL-DSIKIDIDLTCPICLDIVFD 424
            MAFHINLRETK K  K P  F+GCSL F++ KPSLSC+L DSIK+DIDLTC ICLD VFD
Sbjct: 166  MAFHINLRETKVKPNKAPALFEGCSLTFDDDKPSLSCELFDSIKLDIDLTCSICLDTVFD 225

Query: 423  PVSLTCGHIFCYTCACKAASVTIVDGLKEAESREKCALCREAGVYKGAAHLEELNILLSR 244
            PVSLTCGHIFCY CAC AASVTIVDGLK AE +EKC LCR+ GVY+GA HLEELNILLSR
Sbjct: 226  PVSLTCGHIFCYMCACSAASVTIVDGLKAAEPKEKCPLCRKTGVYEGALHLEELNILLSR 285

Query: 243  SCPQYWEERRQAERVERMKQAKEHWETECRLFTGV 139
            S  +YWE+R Q ER+ER++Q KEHWE++CR F GV
Sbjct: 286  SFHKYWEQRLQTERIERIRQVKEHWESQCRAFMGV 320


>ref|XP_003554523.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like [Glycine max]
          Length = 324

 Score =  471 bits (1212), Expect = e-130
 Identities = 231/335 (68%), Positives = 260/335 (77%), Gaps = 1/335 (0%)
 Frame = -3

Query: 1140 MKFCKRYEEYMQGQDHKKLPGVGFXXXXXXXXKCRTEEEEEFHQIHSQNXXXXXXXXXXX 961
            MKFCK+Y+EYMQGQ+ KKLP VGF        KCR           + +           
Sbjct: 1    MKFCKKYQEYMQGQE-KKLPCVGFKKLKKILKKCR----------RNSSSLKPLNASLAA 49

Query: 960  STCPNHCSVCDGTFFPSLLNEMSAVVGSFNERAQKLLELHLASGVHKCFIWFKDKLQGNH 781
             TCP+HC VCDGTFFPSLLNEMS +VG FN+RAQKLLELHLASGV K F W K KLQGNH
Sbjct: 50   KTCPDHCPVCDGTFFPSLLNEMSDIVGCFNQRAQKLLELHLASGVRKYFFWIKGKLQGNH 109

Query: 780  VALVEEGKDLVGYAIINAIAMRKILKKYDKIHYSNQSQAFKSKVQSLHIEILQSPWLCEL 601
             AL++EGKDLV YA+INAIA+RKILKKYDKIHYS Q Q FKS+VQS+H EILQSPWLCEL
Sbjct: 110  TALIQEGKDLVTYALINAIAIRKILKKYDKIHYSKQGQLFKSQVQSMHKEILQSPWLCEL 169

Query: 600  MAFHINLRETKAKKRKTPISFDGCSLVFNEGKPSLSCDL-DSIKIDIDLTCPICLDIVFD 424
            MAFHINLRETK K RK    FDGCSL F +GKPSL+C+L DSIK+DIDLTC ICLD VFD
Sbjct: 170  MAFHINLRETKVKSRKAHALFDGCSLTFKDGKPSLTCELFDSIKVDIDLTCSICLDTVFD 229

Query: 423  PVSLTCGHIFCYTCACKAASVTIVDGLKEAESREKCALCREAGVYKGAAHLEELNILLSR 244
            PVSLTCGHIFCY CAC AASV+IV+GLK A+ + KC LCRE  VY+GA  LEELNILLSR
Sbjct: 230  PVSLTCGHIFCYICACSAASVSIVNGLKSADPKMKCPLCREGAVYEGAVRLEELNILLSR 289

Query: 243  SCPQYWEERRQAERVERMKQAKEHWETECRLFTGV 139
            SC +YWE+R Q ERVER+KQ KEHW+++CR F GV
Sbjct: 290  SCQEYWEQRLQTERVERVKQIKEHWDSQCRAFVGV 324


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