BLASTX nr result

ID: Bupleurum21_contig00010965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010965
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ99598.1| NBS-LRR type resistance protein [Beta vulgaris]         81   8e-14
gb|ABJ99601.1| NBS-LRR type resistance protein [Beta vulgaris]         79   4e-13
ref|NP_001234202.1| NRC1 [Solanum lycopersicum] gi|83630761|gb|A...    77   1e-12
dbj|BAD15107.1| hypothetical protein [Nicotiana tabacum]               75   4e-12
emb|CAN70214.1| hypothetical protein VITISV_038742 [Vitis vinifera]    57   1e-06

>gb|ABJ99598.1| NBS-LRR type resistance protein [Beta vulgaris]
          Length = 895

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/78 (50%), Positives = 56/78 (71%)
 Frame = +3

Query: 21  RRLCIHSHVLNYVRSKPSNLRVRSFLCFATEECELPREHTSFIHEAFKLVRVLDIRSICL 200
           RRL IHS++L+ V+S  +  R RSF+  A EE  LP EH SFI  AF+L+R+LD+ SI  
Sbjct: 521 RRLGIHSYILDCVQSNLTAARTRSFVSMAVEEVRLPLEHISFIPRAFQLLRILDVTSIIF 580

Query: 201 YRFPNDIVQLLHLRYVSI 254
            RFP ++++L+ LRY+S+
Sbjct: 581 ERFPKELLRLVQLRYISM 598


>gb|ABJ99601.1| NBS-LRR type resistance protein [Beta vulgaris]
          Length = 899

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/78 (48%), Positives = 55/78 (70%)
 Frame = +3

Query: 21  RRLCIHSHVLNYVRSKPSNLRVRSFLCFATEECELPREHTSFIHEAFKLVRVLDIRSICL 200
           RRL IHS++L+ V+S  +  R RSF+  A EE  LP EH SFI  AF+L+R+LD+ SI  
Sbjct: 526 RRLGIHSYILDCVQSNLTAARTRSFVSMAVEEVRLPLEHISFIPRAFQLLRILDVTSIIF 585

Query: 201 YRFPNDIVQLLHLRYVSI 254
            RFP +++ L+ LRY+++
Sbjct: 586 ERFPKELLGLVQLRYIAM 603


>ref|NP_001234202.1| NRC1 [Solanum lycopersicum] gi|83630761|gb|ABC26878.1| NRC1
           [Solanum lycopersicum]
          Length = 888

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = +3

Query: 18  YRRLCIHSHVLNYVRSKPSNLRVRSFLCFATEECELPREHTSFIHEAFKLVRVLDIRSIC 197
           +RRLCIHS V+ ++  KPS   VRSFLCF+ E+ + P   ++ I +AF L+RV D  SI 
Sbjct: 515 HRRLCIHSSVVEFISKKPSGEHVRSFLCFSPEKIDTPPTVSANISKAFPLLRVFDTESIK 574

Query: 198 LYRFPNDIVQLLHLRYVS 251
           + RF  +  QL HLRY++
Sbjct: 575 INRFCKEFFQLYHLRYIA 592


>dbj|BAD15107.1| hypothetical protein [Nicotiana tabacum]
          Length = 364

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = +3

Query: 18  YRRLCIHSHVLNYVRSKPSNLRVRSFLCFATEECELPREHTSFIHEAFKLVRVLDIRSIC 197
           YRRLCIHS VL ++ +KPS   VRSFL F+ ++ E+P      I + F L+RV D+ SI 
Sbjct: 55  YRRLCIHSSVLEFISTKPSGEHVRSFLSFSLKKIEMPSVDIPTIPKGFPLLRVFDVESIN 114

Query: 198 LYRFPNDIVQLLHLRYVS 251
             RF  +  +L HLRY++
Sbjct: 115 FSRFSKEFFRLYHLRYIA 132


>emb|CAN70214.1| hypothetical protein VITISV_038742 [Vitis vinifera]
          Length = 902

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/83 (34%), Positives = 48/83 (57%)
 Frame = +3

Query: 6   IPTYYRRLCIHSHVLNYVRSKPSNLRVRSFLCFATEECELPREHTSFIHEAFKLVRVLDI 185
           + T  RR+ +HS +  Y++ +  N   RS L F+  E  L RE    + E+ KL+RVLD+
Sbjct: 529 VTTRARRISVHSSLEEYMKLRHPNPHFRSMLHFSRCEESLRREQWKSLFESLKLLRVLDL 588

Query: 186 RSICLYRFPNDIVQLLHLRYVSI 254
             +  +  P +I +L+HLRY+ +
Sbjct: 589 ERVQTHALPKEIRELVHLRYLGL 611


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