BLASTX nr result

ID: Bupleurum21_contig00010956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010956
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchor...    72   5e-11
emb|CBI37795.3| unnamed protein product [Vitis vinifera]               72   5e-11
emb|CAN68930.1| hypothetical protein VITISV_040617 [Vitis vinifera]    62   6e-08
gb|AEJ08745.1| RSI3 [Solanum tuberosum]                                60   2e-07
ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor...    59   3e-07

>ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
           vinifera]
          Length = 353

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   STQCIDVNLSLGNTTATSSGCDRTTCDYEGYDNRNILTSARNSTCKAPAGANS-ATTISS 179
           S +C    LS+GN+T+T+  C+RTTC Y GY N+ I TS   STC +   A S A+ I+ 
Sbjct: 273 SMECGSSGLSIGNSTSTT--CNRTTCAYAGYTNQTIFTSLVESTCSSTNNAPSYASKITL 330

Query: 180 QGWRWNFLLIAVQVTVLSLH 239
             WRWNF+ I  Q+ +L LH
Sbjct: 331 PSWRWNFVFIVSQLVMLYLH 350


>emb|CBI37795.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   STQCIDVNLSLGNTTATSSGCDRTTCDYEGYDNRNILTSARNSTCKAPAGANS-ATTISS 179
           S +C    LS+GN+T+T+  C+RTTC Y GY N+ I TS   STC +   A S A+ I+ 
Sbjct: 264 SMECGSSGLSIGNSTSTT--CNRTTCAYAGYTNQTIFTSLVESTCSSTNNAPSYASKITL 321

Query: 180 QGWRWNFLLIAVQVTVLSLH 239
             WRWNF+ I  Q+ +L LH
Sbjct: 322 PSWRWNFVFIVSQLVMLYLH 341


>emb|CAN68930.1| hypothetical protein VITISV_040617 [Vitis vinifera]
          Length = 414

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   STQCIDVNLSLGNTTATSSGCDRTTCDYEGYDNRNILTS-ARNSTCKAPAGANSATTISS 179
           S QC   +L +GN+T  S+GC++TTC Y GY ++ ILT+    +TC A    N A  I  
Sbjct: 266 SMQCEGSSLYIGNST--SAGCNQTTCAYXGYTSQMILTTLVEENTCSA---RNDAQKIGL 320

Query: 180 QGWRWNFLLIAVQVTVLSLHLF 245
           Q W W FL I+ Q+  L L  F
Sbjct: 321 QVWSWGFLFISCQLLSLGLQFF 342


>gb|AEJ08745.1| RSI3 [Solanum tuberosum]
          Length = 354

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +3

Query: 3   STQCIDV-NLSLGNTTATSSGCDRTTCDYEGYDNRNILTSARNSTCKAPAGANSATTI-- 173
           S QC  + NL +GN T TSS C+ T+C Y GY N+ I T++   TC  PA  NSA  +  
Sbjct: 273 SMQCQGLDNLYIGNVT-TSSECNSTSCAYAGYSNQTIFTTSTQLTC--PASDNSALGMRP 329

Query: 174 SSQGWRWNFLLIA 212
            + GWRWN +L+A
Sbjct: 330 GTWGWRWNVILVA 342


>ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus
           communis] gi|223534898|gb|EEF36585.1| LysM domain
           GPI-anchored protein 2 precursor, putative [Ricinus
           communis]
          Length = 361

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = +3

Query: 24  NLSLGNTTATSSGCDRTTCDYEGYDNRNILTS-ARNSTCKAPA-GANSATTISSQGWRWN 197
           NLS+GN+T  ++GC+ TTC Y G+ N+ ILT+ A  STC A   G+ S    SS G  W 
Sbjct: 287 NLSIGNST--NAGCNTTTCAYAGFSNQTILTALATVSTCPASTPGSGSDNYASSSGMSWK 344

Query: 198 FLLIAVQVTVLSLHLFQ 248
           FL+I++ + +L ++  Q
Sbjct: 345 FLIISLHLFLLCVYPLQ 361