BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010953
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   359   7e-97
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              359   7e-97
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...   353   4e-95
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...   349   7e-94
gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays]        332   9e-89

>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
            vinifera]
          Length = 1231

 Score =  359 bits (921), Expect = 7e-97
 Identities = 182/278 (65%), Positives = 220/278 (79%), Gaps = 1/278 (0%)
 Frame = +3

Query: 213  DNVQIAEATRIKIQALLDDFRTSNEKAYTFDANLTNTERAAVHMLCRKMGLTSKSSGRGD 392
            +N  +AE TRI+I   L +FR ++ + YTF+ANLTN ERA VH +CRKMG+TSKSSGRG 
Sbjct: 15   NNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGS 74

Query: 393  QRRVSVFKNKAKSGATKKEHLTRFTFSEESKVVLQDLFVRYPPDDDDNGEKTIKL-CRNT 569
            QRRVSV+K K K    K+E      FSEE+K VL DLF RYPPDD +   + ++     T
Sbjct: 75   QRRVSVYKTKKKVDTKKEEGNPYLNFSEEAKEVLLDLFTRYPPDDKEMVTQMVENGSGKT 134

Query: 570  DKLKRKKDDIFSRPDLSKADIEKKAESLAYKRNNVSVLKQITEKRSKLPIAAFRDVITST 749
            +K+  KKDDIF RP ++KA+I KK E LA +      L+QITE RSKLPIA+F+DVITST
Sbjct: 135  EKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSKLPIASFKDVITST 194

Query: 750  IDSHQVVLISGETGCGKTTQVPQYILDHMWSKGETCKIVCTQPRRISATSVAERISSERG 929
            I+SHQVVLISGETGCGKTTQVPQ++LD+MW KGE CKIVCTQPRRISATSVAERIS E+G
Sbjct: 195  IESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRRISATSVAERISFEKG 254

Query: 930  ENIGDCVGYKIRLESKGGKNSSIVFCTNGVLLRVLVAQ 1043
            EN+GD VGYKIRLESKGG++SSI+FCTNG+LLRVLV++
Sbjct: 255  ENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSK 292


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  359 bits (921), Expect = 7e-97
 Identities = 182/278 (65%), Positives = 220/278 (79%), Gaps = 1/278 (0%)
 Frame = +3

Query: 213  DNVQIAEATRIKIQALLDDFRTSNEKAYTFDANLTNTERAAVHMLCRKMGLTSKSSGRGD 392
            +N  +AE TRI+I   L +FR ++ + YTF+ANLTN ERA VH +CRKMG+TSKSSGRG 
Sbjct: 15   NNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGS 74

Query: 393  QRRVSVFKNKAKSGATKKEHLTRFTFSEESKVVLQDLFVRYPPDDDDNGEKTIKL-CRNT 569
            QRRVSV+K K K    K+E      FSEE+K VL DLF RYPPDD +   + ++     T
Sbjct: 75   QRRVSVYKTKKKVDTKKEEGNPYLNFSEEAKEVLLDLFTRYPPDDKEMVTQMVENGSGKT 134

Query: 570  DKLKRKKDDIFSRPDLSKADIEKKAESLAYKRNNVSVLKQITEKRSKLPIAAFRDVITST 749
            +K+  KKDDIF RP ++KA+I KK E LA +      L+QITE RSKLPIA+F+DVITST
Sbjct: 135  EKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSKLPIASFKDVITST 194

Query: 750  IDSHQVVLISGETGCGKTTQVPQYILDHMWSKGETCKIVCTQPRRISATSVAERISSERG 929
            I+SHQVVLISGETGCGKTTQVPQ++LD+MW KGE CKIVCTQPRRISATSVAERIS E+G
Sbjct: 195  IESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRRISATSVAERISFEKG 254

Query: 930  ENIGDCVGYKIRLESKGGKNSSIVFCTNGVLLRVLVAQ 1043
            EN+GD VGYKIRLESKGG++SSI+FCTNG+LLRVLV++
Sbjct: 255  ENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSK 292


>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1229

 Score =  353 bits (906), Expect = 4e-95
 Identities = 178/279 (63%), Positives = 223/279 (79%), Gaps = 3/279 (1%)
 Frame = +3

Query: 216  NVQIAEATRIKIQALLDDFRTSNEKAYTFDANLTNTERAAVHMLCRKMGLTSKSSGRGDQ 395
            N  +AEATRI+I  +L+ FR + ++ +TF+ANL+N ERA VH +C+K+G+ SKS+GRG Q
Sbjct: 13   NPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKLGMKSKSTGRGHQ 72

Query: 396  RRVSVFK--NKAKSGATKKEHLTRFTFSEESKVVLQDLFVRYPPDDDDNGEKTIKLCRNT 569
            RRVS++K   KA +G   KE LT  TFSEESK+VLQ+LF  YPP+D + G K +  C+  
Sbjct: 73   RRVSIYKIIQKADTG-NGKESLTNLTFSEESKLVLQELFAYYPPEDGELGAKIVGNCKAK 131

Query: 570  DKL-KRKKDDIFSRPDLSKADIEKKAESLAYKRNNVSVLKQITEKRSKLPIAAFRDVITS 746
            D + + KKD IFS P ++KADI KK ESL  +    + L+QI E+RSKLPIA+FRDVITS
Sbjct: 132  DSIIQGKKDGIFSMPSMAKADITKKVESLNSRIEKDANLRQIVEQRSKLPIASFRDVITS 191

Query: 747  TIDSHQVVLISGETGCGKTTQVPQYILDHMWSKGETCKIVCTQPRRISATSVAERISSER 926
            T++SHQ+VLISGETGCGKTTQVPQY+L++ W K E CKI+CTQPRRISA SVAERISSER
Sbjct: 192  TVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCEACKIICTQPRRISAISVAERISSER 251

Query: 927  GENIGDCVGYKIRLESKGGKNSSIVFCTNGVLLRVLVAQ 1043
            GEN+GD +GYKIRLESKGGKNSSIV CTNGVLLR+LV++
Sbjct: 252  GENVGDDIGYKIRLESKGGKNSSIVLCTNGVLLRLLVSR 290


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
            predicted protein [Populus trichocarpa]
          Length = 1195

 Score =  349 bits (895), Expect = 7e-94
 Identities = 182/278 (65%), Positives = 216/278 (77%), Gaps = 2/278 (0%)
 Frame = +3

Query: 216  NVQIAEATRIKIQALLDDFRTSNEKAYTFDANLTNTERAAVHMLCRKMGLTSKSSGRGDQ 395
            N ++AEAT I+I  +L+ FR + ++ YTF+ANL+N +RA VH +C+KMG+ SKSSGRG Q
Sbjct: 14   NPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRGGQ 73

Query: 396  RRVSVFKNKAKSGATK-KEHLTRFTFSEESKVVLQDLFVRYPPDDDDNG-EKTIKLCRNT 569
            RRVSV+KN  K    K KE+LT  TFS ESK+VL +LF  YPP++   G E   K     
Sbjct: 74   RRVSVYKNTKKLDDVKGKENLTHLTFSGESKMVLGELFSNYPPEEGGFGAELEGKHSGTA 133

Query: 570  DKLKRKKDDIFSRPDLSKADIEKKAESLAYKRNNVSVLKQITEKRSKLPIAAFRDVITST 749
             K + KKDDIFS+P   KA+I KK ES A +      LKQI E RSKLPIA+F DVITST
Sbjct: 134  GKTREKKDDIFSKPSRKKAEIAKKVESFASRIEKDVKLKQIVEGRSKLPIASFMDVITST 193

Query: 750  IDSHQVVLISGETGCGKTTQVPQYILDHMWSKGETCKIVCTQPRRISATSVAERISSERG 929
            I+SHQVVLISGETGCGKTTQVPQ++LDHMW KGE CKIVCTQPRRISA SV+ERIS ERG
Sbjct: 194  IESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKIVCTQPRRISAISVSERISYERG 253

Query: 930  ENIGDCVGYKIRLESKGGKNSSIVFCTNGVLLRVLVAQ 1043
            EN+GD VGYKIRLESKGGK+SSIVFCTNGVLLR+LV++
Sbjct: 254  ENVGDSVGYKIRLESKGGKHSSIVFCTNGVLLRILVSK 291


>gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays]
          Length = 985

 Score =  332 bits (851), Expect = 9e-89
 Identities = 162/272 (59%), Positives = 210/272 (77%), Gaps = 1/272 (0%)
 Frame = +3

Query: 231  EATRIKIQALLDDFRTSNEKAYTFDANLTNTERAAVHMLCRKMGLTSKSSGRGDQRRVSV 410
            EAT +++   L+DFR SN + YTF+ +++  ERAA+H +CRKMG+ SKSSG G++RR+SV
Sbjct: 100  EATLVRVSKALEDFRASNAEVYTFEPDISKQERAAIHEMCRKMGMISKSSGNGERRRLSV 159

Query: 411  FKNKAKSGATKKEHLTRFTFSEESKVVLQDLFVRYPPDDDD-NGEKTIKLCRNTDKLKRK 587
            +K K K G   ++  +   FSEE++ VLQDLF+ YPP D D +G+           +K +
Sbjct: 160  YKRKQKRGPELEQGPSYLGFSEEARHVLQDLFMHYPPGDADLSGDVDQSSSDKAANIKWR 219

Query: 588  KDDIFSRPDLSKADIEKKAESLAYKRNNVSVLKQITEKRSKLPIAAFRDVITSTIDSHQV 767
             D+ F RP +SK DI KK E LA K N    L+++ E R+KLPI++F+DVITST+++HQV
Sbjct: 220  TDNAFCRPAMSKLDITKKVEMLASKINGSEQLRKVMEDRTKLPISSFKDVITSTLENHQV 279

Query: 768  VLISGETGCGKTTQVPQYILDHMWSKGETCKIVCTQPRRISATSVAERISSERGENIGDC 947
            VLISG+TGCGKTTQVPQYILDHMW KGE+CKI+CTQPRRISA SVAERIS+ERGE +GD 
Sbjct: 280  VLISGQTGCGKTTQVPQYILDHMWGKGESCKIICTQPRRISAISVAERISAERGEAVGDT 339

Query: 948  VGYKIRLESKGGKNSSIVFCTNGVLLRVLVAQ 1043
            VGYKIRLESKGGKNSS++FCTNGVLLR+L+ +
Sbjct: 340  VGYKIRLESKGGKNSSVLFCTNGVLLRLLIGR 371