BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010939
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     123   2e-41
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   125   5e-41
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             121   7e-41
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                125   2e-40
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             122   1e-38

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  123 bits (309), Expect(3) = 2e-41
 Identities = 59/111 (53%), Positives = 78/111 (70%)
 Frame = -1

Query: 537 LLLKEEDKVHKHIYYVSKVLHGVEIRYSVIEKFALTLVTSARKLRPYFQARVIEVLTDQP 358
           ++++EEDK    IY++S  L   E  Y +IEK A  +V +ARKL+PYF A  + VLTDQP
Sbjct: 621 VIIREEDKQQHPIYFISHTLLAAETNYPLIEKAAFAVVVAARKLKPYFNAHPVTVLTDQP 680

Query: 357 LENILNSMKISGRMIKWAVELGEYEIKYKPRTAIKAQALADFLVECTHPNQ 205
           LE  L + + SGR+IKWAVEL  + I+YKPR +IK QALADFL ECT+  +
Sbjct: 681 LEKALENFEKSGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAECTYQEE 731



 Score = 57.4 bits (137), Expect(3) = 2e-41
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = -3

Query: 700 RVATLGRFISKSEDKCLPFFKTLKKPNNFEWTPESEEAFEALKNYLAQAPLLAKPLV 530
           R+A L RFIS+S DK  PFFK LK   +F W  E   AF  LK +L   P L++P++
Sbjct: 547 RMAALARFISRSTDKSTPFFKVLKGNKDFSWGEEQSTAFRQLKAHLITLPTLSRPML 603



 Score = 36.6 bits (83), Expect(3) = 2e-41
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -2

Query: 107 WTINFDGPSKTNNNRAGLVLKSPEDFTIEYALKF 6
           W +  DG S TN++ AG+++ SP     EYALKF
Sbjct: 737 WEVYTDGSSTTNSSGAGILIISPNGDEFEYALKF 770


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  125 bits (315), Expect(3) = 5e-41
 Identities = 61/118 (51%), Positives = 85/118 (72%)
 Frame = -1

Query: 555 PRYWQNLLLKEEDKVHKHIYYVSKVLHGVEIRYSVIEKFALTLVTSARKLRPYFQARVIE 376
           P+    +LL E  K    IY+VS VL+  E RY ++EK +L ++ +ARKLRPYF A  I+
Sbjct: 74  PKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQ 133

Query: 375 VLTDQPLENILNSMKISGRMIKWAVELGEYEIKYKPRTAIKAQALADFLVECTHPNQE 202
           VL++ PLE  L  +  SGR+++WAVEL E+E++YKPRTAIKAQALADF+VE ++  +E
Sbjct: 134 VLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEE 191



 Score = 56.6 bits (135), Expect(3) = 5e-41
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = -3

Query: 700 RVATLGRFISKSEDKCLPFFKTLKKPNNFEWTPESEEAFEALKNYLAQAPLLAKP 536
           R+A L RFISKS DK LPFF+ L+    F+W  E   AF A+K +L + P + +P
Sbjct: 6   RMAALTRFISKSADKALPFFQLLRGNKTFKWGEEERTAFAAIKEHLKKLPTVTRP 60



 Score = 33.5 bits (75), Expect(3) = 5e-41
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 107 WTINFDGPSKTNNNRAGLVLKSPEDFTIEYALKF 6
           W +  DG +    + AG+++ SPE    EYA+KF
Sbjct: 197 WKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKF 230


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  121 bits (303), Expect(2) = 7e-41
 Identities = 62/106 (58%), Positives = 78/106 (73%)
 Frame = -1

Query: 540  NLLLKEEDKVHKHIYYVSKVLHGVEIRYSVIEKFALTLVTSARKLRPYFQARVIEVLTDQ 361
            ++L++E+    + I+Y SK L   E RY VIEK AL +VTSARKLRPYFQ+  I VLTDQ
Sbjct: 1134 SVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQ 1193

Query: 360  PLENILNSMKISGRMIKWAVELGEYEIKYKPRTAIKAQALADFLVE 223
            PL   L+S   SGRM KWAVEL EY+I ++PR A+K+Q LADFL+E
Sbjct: 1194 PLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIE 1239



 Score = 73.6 bits (179), Expect(2) = 7e-41
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -3

Query: 700  RVATLGRFISKSEDKCLPFFKTLKKPNNFEWTPESEEAFEALKNYLAQAPLLAKPLV 530
            R+A L RFIS+S DKCLPF+  LK+   F+W  +SEEAFE LK+YL+  P+L KP V
Sbjct: 1061 RIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEV 1117


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  125 bits (315), Expect(3) = 2e-40
 Identities = 61/118 (51%), Positives = 85/118 (72%)
 Frame = -1

Query: 555 PRYWQNLLLKEEDKVHKHIYYVSKVLHGVEIRYSVIEKFALTLVTSARKLRPYFQARVIE 376
           P+    +LL E  K    IY+VS VL+  E RY ++EK +L ++ +ARKLRPYF A  I+
Sbjct: 74  PKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQ 133

Query: 375 VLTDQPLENILNSMKISGRMIKWAVELGEYEIKYKPRTAIKAQALADFLVECTHPNQE 202
           VL++ PLE  L  +  SGR+++WAVEL E+E++YKPRTAIKAQALADF+VE ++  +E
Sbjct: 134 VLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEE 191



 Score = 54.7 bits (130), Expect(3) = 2e-40
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = -3

Query: 700 RVATLGRFISKSEDKCLPFFKTLKKPNNFEWTPESEEAFEALKNYLAQAPLLAKP 536
           R+A L RFIS+S DK LPFF+ L+    F W  E   AF A+K +L + P + +P
Sbjct: 6   RMAALTRFISRSADKALPFFQLLRGNKTFTWGEEERTAFAAIKEHLKKLPTVTRP 60



 Score = 33.5 bits (75), Expect(3) = 2e-40
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 107 WTINFDGPSKTNNNRAGLVLKSPEDFTIEYALKF 6
           W +  DG +    + AG+++ SPE    EYA+KF
Sbjct: 197 WKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKF 230


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  122 bits (305), Expect(3) = 1e-38
 Identities = 61/109 (55%), Positives = 81/109 (74%)
 Frame = -1

Query: 537 LLLKEEDKVHKHIYYVSKVLHGVEIRYSVIEKFALTLVTSARKLRPYFQARVIEVLTDQP 358
           +L++E+    K IYYVSK +   E RY+++EK AL +VTSARKLRPYFQ+  ++VLT+QP
Sbjct: 332 VLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTNQP 391

Query: 357 LENILNSMKISGRMIKWAVELGEYEIKYKPRTAIKAQALADFLVECTHP 211
           L  IL+S   SGR+ KWAVEL EY+I++K R ++KAQ LADFL E   P
Sbjct: 392 LRTILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLTELPIP 440



 Score = 62.0 bits (149), Expect(3) = 1e-38
 Identities = 30/58 (51%), Positives = 38/58 (65%)
 Frame = -3

Query: 700 RVATLGRFISKSEDKCLPFFKTLKKPNNFEWTPESEEAFEALKNYLAQAPLLAKPLVE 527
           R+A L RFIS+S DK LPF++ LK    F W  + EEAF  LK YL   P+L+KP V+
Sbjct: 258 RIAALNRFISRSTDKSLPFYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVD 315



 Score = 23.9 bits (50), Expect(3) = 1e-38
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -2

Query: 119 KKEFWTINFDGPSKTNNNRAGLVLKSPEDFTIEYALK 9
           + + W ++ DG S    +  G+ L+SP    +E + +
Sbjct: 447 ENQTWKLHVDGSSTKQGSVVGIKLESPTSEILEQSFR 483