BLASTX nr result

ID: Bupleurum21_contig00010931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010931
         (1626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22695.3| unnamed protein product [Vitis vinifera]              479   e-133
ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   479   e-133
ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus ...   464   e-128
ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumi...   460   e-127
ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|2...   449   e-123

>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  479 bits (1233), Expect = e-133
 Identities = 248/346 (71%), Positives = 285/346 (82%), Gaps = 7/346 (2%)
 Frame = -2

Query: 1472 MAIVRPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTGMGSSKNYAIKLPQRVNP 1293
            MA+V+PEMKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQTGMGSSKNYAI LPQRVNP
Sbjct: 6    MAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNP 65

Query: 1292 AVLGLILDYCRFHQLPGHSNKERKTYDEKFIRLDTKNLCELTSAADSLQLRPLVDLTSRA 1113
            A+LGLILDYCRFHQ+PG SNKERK++DEKFIR+DTK LCELTSAADSLQL+PLVDLTSRA
Sbjct: 66   AILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125

Query: 1112 LARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELKERQK 933
            LAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+TDDPRIRLLNRLYARKRKELKER+K
Sbjct: 126  LARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREK 185

Query: 932  SKNVEVVEELVDKRSVDDLLSFINGGVGDSNCVRTAXXXXXXXXXKDQPRNTSSN----- 768
             KNVEV EE VD+RSVDDLLSFING  GDS  VR +         KDQ +++SSN     
Sbjct: 186  LKNVEVEEERVDERSVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNGD 245

Query: 767  HERELESLKPARDDGVIED--VSSPSEASTLQDSTSATFLSNTXXXXXXXXXXXDPVLKE 594
            H++EL+ +  +  +   ++  VS+PS+ S LQ+  ++TF               DP +KE
Sbjct: 246  HKKELDGVHTSCHNAEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMKE 305

Query: 593  ELDREVEDFARRLSSVWPDRMQEILSLGQERRLLPISINGNSSVAR 456
            +LDREVEDFARRL+S WP+RMQEILSLGQ+RRL+PIS+NGN S  R
Sbjct: 306  QLDREVEDFARRLNSDWPERMQEILSLGQQRRLVPISMNGNGSAHR 351


>ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 359

 Score =  479 bits (1233), Expect = e-133
 Identities = 248/346 (71%), Positives = 285/346 (82%), Gaps = 7/346 (2%)
 Frame = -2

Query: 1472 MAIVRPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTGMGSSKNYAIKLPQRVNP 1293
            MA+V+PEMKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQTGMGSSKNYAI LPQRVNP
Sbjct: 6    MAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNP 65

Query: 1292 AVLGLILDYCRFHQLPGHSNKERKTYDEKFIRLDTKNLCELTSAADSLQLRPLVDLTSRA 1113
            A+LGLILDYCRFHQ+PG SNKERK++DEKFIR+DTK LCELTSAADSLQL+PLVDLTSRA
Sbjct: 66   AILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125

Query: 1112 LARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELKERQK 933
            LAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+TDDPRIRLLNRLYARKRKELKER+K
Sbjct: 126  LARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREK 185

Query: 932  SKNVEVVEELVDKRSVDDLLSFINGGVGDSNCVRTAXXXXXXXXXKDQPRNTSSN----- 768
             KNVEV EE VD+RSVDDLLSFING  GDS  VR +         KDQ +++SSN     
Sbjct: 186  LKNVEVEEERVDERSVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNGD 245

Query: 767  HERELESLKPARDDGVIED--VSSPSEASTLQDSTSATFLSNTXXXXXXXXXXXDPVLKE 594
            H++EL+ +  +  +   ++  VS+PS+ S LQ+  ++TF               DP +KE
Sbjct: 246  HKKELDGVHTSCHNAEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMKE 305

Query: 593  ELDREVEDFARRLSSVWPDRMQEILSLGQERRLLPISINGNSSVAR 456
            +LDREVEDFARRL+S WP+RMQEILSLGQ+RRL+PIS+NGN S  R
Sbjct: 306  QLDREVEDFARRLNSDWPERMQEILSLGQQRRLVPISMNGNGSAHR 351


>ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547589|gb|EEF49084.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 378

 Score =  464 bits (1195), Expect = e-128
 Identities = 244/338 (72%), Positives = 274/338 (81%), Gaps = 6/338 (1%)
 Frame = -2

Query: 1451 MKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTGMGSSKNYAIKLPQRVNPAVLGLIL 1272
            MKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQTGMGSSKNYAI LPQRVNPA+LGLIL
Sbjct: 1    MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60

Query: 1271 DYCRFHQLPGHSNKERKTYDEKFIRLDTKNLCELTSAADSLQLRPLVDLTSRALARMIEG 1092
            DYCRFHQ+PG SNKERKT+DEKFIR+DTK LCELTSAADSLQL+PLVDLTSRALAR+IEG
Sbjct: 61   DYCRFHQVPGRSNKERKTFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 120

Query: 1091 KTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELKERQKSKNVEVV 912
            KTPEEIRETFHLPDDLTEEEKLEPLRN+TDDPRIRLLNRLYARKRKELKER+K KNVEV 
Sbjct: 121  KTPEEIRETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEREKMKNVEVE 180

Query: 911  EELVDKRSVDDLLSFINGGVGDSNCVRTAXXXXXXXXXKDQPRNTSS-----NHERELES 747
            EE VD+RSVDDLLS+ING  GD    RT+         KDQ + +SS     NH ++  S
Sbjct: 181  EERVDERSVDDLLSYINGADGDPKGGRTSKNKKKNRRRKDQSKESSSNNLNENHNKKTNS 240

Query: 746  LKPARDDGVIED-VSSPSEASTLQDSTSATFLSNTXXXXXXXXXXXDPVLKEELDREVED 570
               A   G + D V+SPS+ S  Q+S +A+                DP +KEELDREVED
Sbjct: 241  CPSACHSGEVRDMVASPSKTSR-QESGAASLSPKLEFDDADIDDDLDPAMKEELDREVED 299

Query: 569  FARRLSSVWPDRMQEILSLGQERRLLPISINGNSSVAR 456
            FARRL+S WP+RMQEILSLGQERRL+P+S+NGN S++R
Sbjct: 300  FARRLNSDWPERMQEILSLGQERRLVPLSMNGNGSLSR 337


>ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumis sativus]
            gi|449524038|ref|XP_004169030.1| PREDICTED: SKP1-like
            protein 21-like [Cucumis sativus]
          Length = 425

 Score =  460 bits (1183), Expect = e-127
 Identities = 244/348 (70%), Positives = 277/348 (79%), Gaps = 9/348 (2%)
 Frame = -2

Query: 1472 MAIVRPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTGMGSSKNYAIKLPQRVNP 1293
            MA+V+PEMKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQTGMGSSKNYAI LPQRVNP
Sbjct: 6    MAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNP 65

Query: 1292 AVLGLILDYCRFHQLPGHSNKERKTYDEKFIRLDTKNLCELTSAADSLQLRPLVDLTSRA 1113
            A+LGLILDYCRFHQ+PG SNKERKT+DEKFIR+DTK LCELTSAADSLQL+PLVDLTSRA
Sbjct: 66   AILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125

Query: 1112 LARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELKERQK 933
            LAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+TDDPRIRLLNRLYARKRKEL+ER+K
Sbjct: 126  LARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREK 185

Query: 932  SKNVEVVEELVDKRSVDDLLSFINGGVGDSNCVRTAXXXXXXXXXKDQPRNTSS------ 771
             KNVE +EE VD RSVDDLLSFINGG GDS  V+T          KDQ +++SS      
Sbjct: 186  LKNVE-IEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNENG 244

Query: 770  NHER-ELESLKPARDDGVIEDV--SSPSEASTLQDSTSATFLSNTXXXXXXXXXXXDPVL 600
            NH++ EL++L     +     +  +SPS     QDS +A + S             DP +
Sbjct: 245  NHDKIELDALPSCCQNNEFNQILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPAM 304

Query: 599  KEELDREVEDFARRLSSVWPDRMQEILSLGQERRLLPISINGNSSVAR 456
            KEELDREVEDFARRL+S WP+R+QEILSLGQER L+ + + GN S  R
Sbjct: 305  KEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTV-LTGNGSSPR 351


>ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|222858884|gb|EEE96431.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  449 bits (1154), Expect = e-123
 Identities = 229/346 (66%), Positives = 276/346 (79%), Gaps = 7/346 (2%)
 Frame = -2

Query: 1472 MAIVRPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTGMGSSKNYAIKLPQRVNP 1293
            +A+V+PEMKSYIWLQT DGS+QQVEEEVAMFCPMICRE++Q GMGSSKN+AI LPQR+NP
Sbjct: 6    LAVVKPEMKSYIWLQTADGSVQQVEEEVAMFCPMICREIIQAGMGSSKNHAISLPQRLNP 65

Query: 1292 AVLGLILDYCRFHQLPGHSNKERKTYDEKFIRLDTKNLCELTSAADSLQLRPLVDLTSRA 1113
            A+LGLILDYCRFHQ+PGHSNKERKT+DEKFIR+DTK LCELTSAADSLQL+PLVDLTSRA
Sbjct: 66   AILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRA 125

Query: 1112 LARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELKERQK 933
            LAR+IEGKTPEEIRETFHLPDDLTEEEKLEPL N+TDDPRIRLLNRLYARKR+EL+ER+K
Sbjct: 126  LARIIEGKTPEEIRETFHLPDDLTEEEKLEPLGNITDDPRIRLLNRLYARKRRELREREK 185

Query: 932  SKNVEVVEELVDKRSVDDLLSFINGGVGDSNCVRTAXXXXXXXXXKDQPRNTSSNH---- 765
             KNV+V +E  D RSV+DLLSFING  GDS   R +         K+Q +++SSN+    
Sbjct: 186  LKNVDVEDERSDNRSVEDLLSFINGEDGDSKGGRNSKNKKKNRRRKEQAKDSSSNNPNEN 245

Query: 764  -ERELESLKPARDDGVIEDV--SSPSEASTLQDSTSATFLSNTXXXXXXXXXXXDPVLKE 594
             ++E ++L     +  + D+  +SPS+ S  Q  ++ TF               DP +KE
Sbjct: 246  QKKESDTLPSVSLNDEVNDILAASPSKTSNFQGCSAVTFSPKLDFDDADIDDDLDPAMKE 305

Query: 593  ELDREVEDFARRLSSVWPDRMQEILSLGQERRLLPISINGNSSVAR 456
            ELDREVEDFARRL+S WP+RMQEILSL Q++R +P+S+NGN +  R
Sbjct: 306  ELDREVEDFARRLNSDWPERMQEILSLDQKKRPVPLSMNGNGTSRR 351


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