BLASTX nr result

ID: Bupleurum21_contig00010930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010930
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633549.1| PREDICTED: DNA-damage-repair/toleration prot...   106   2e-21
ref|XP_003599106.1| DNA-damage-repair/toleration protein DRT100 ...    93   3e-17
ref|XP_002299953.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
gb|ACM89582.1| leucine rich repeat protein [Glycine max]               92   4e-17
emb|CAE76632.1| leucine rich repeat protein [Cicer arietinum]          92   4e-17

>ref|XP_003633549.1| PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Vitis
           vinifera] gi|375112316|gb|AFA35119.1| DRT100-like
           protein [Vitis vinifera]
          Length = 356

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/93 (55%), Positives = 65/93 (69%)
 Frame = +3

Query: 9   LVDFDLSMNQISGFVPVELGSMPAXXXXXXXXXXXXGEIPGTLLSSFGLNIVNLSRNNFD 188
           L DFDLS+NQISG +P ELGSMP             G IP +LLS+ GLNI+NLSRN+ +
Sbjct: 225 LADFDLSVNQISGVIPAELGSMPVLSTLNLDSNRLSGSIPASLLSNTGLNILNLSRNSLE 284

Query: 189 GFLRDVFHPQTYFLSFDVSYNNLKGSIPQTIRS 287
           G L DVF  +TYF+  D+SYNNLKG IP+++ S
Sbjct: 285 GKLPDVFGSKTYFIGLDLSYNNLKGQIPKSLSS 317


>ref|XP_003599106.1| DNA-damage-repair/toleration protein DRT100 [Medicago truncatula]
           gi|355488154|gb|AES69357.1| DNA-damage-repair/toleration
           protein DRT100 [Medicago truncatula]
          Length = 369

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/93 (47%), Positives = 60/93 (64%)
 Frame = +3

Query: 9   LVDFDLSMNQISGFVPVELGSMPAXXXXXXXXXXXXGEIPGTLLSSFGLNIVNLSRNNFD 188
           L D DLSMN+++G +P ELG MP             G+IP +LLS+ GL I+NLSRN F 
Sbjct: 229 LADLDLSMNRLTGSLPYELGKMPVLSTLNLDSNSLSGQIPSSLLSNSGLGILNLSRNGFS 288

Query: 189 GFLRDVFHPQTYFLSFDVSYNNLKGSIPQTIRS 287
           G + DVF P +YF+  D+S+NNL G +P ++ S
Sbjct: 289 GTIPDVFCPNSYFMVLDMSFNNLNGRVPGSLSS 321


>ref|XP_002299953.1| predicted protein [Populus trichocarpa] gi|222847211|gb|EEE84758.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 62/93 (66%)
 Frame = +3

Query: 9   LVDFDLSMNQISGFVPVELGSMPAXXXXXXXXXXXXGEIPGTLLSSFGLNIVNLSRNNFD 188
           L D DLS+NQISG++P  +GSMP             G +P +LLSS GL ++NLS+N  +
Sbjct: 228 LADLDLSVNQISGWLPDWIGSMPVLSTLNLDSNMISGPLPQSLLSSTGLGMLNLSKNAIE 287

Query: 189 GFLRDVFHPQTYFLSFDVSYNNLKGSIPQTIRS 287
           G + D F P+TYF++ D+SYNNLKG IP ++ S
Sbjct: 288 GNIPDAFGPKTYFMALDLSYNNLKGPIPSSLSS 320


>gb|ACM89582.1| leucine rich repeat protein [Glycine max]
          Length = 274

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/93 (47%), Positives = 61/93 (65%)
 Frame = +3

Query: 9   LVDFDLSMNQISGFVPVELGSMPAXXXXXXXXXXXXGEIPGTLLSSFGLNIVNLSRNNFD 188
           L D DLS N++SG VP ELG+MP             G IP +LLS+ G+ I+NLSRN F+
Sbjct: 136 LADLDLSANRLSGSVPFELGTMPVLSTLNLDSNSLEGLIPSSLLSNGGMGILNLSRNGFE 195

Query: 189 GFLRDVFHPQTYFLSFDVSYNNLKGSIPQTIRS 287
           G + DVF   +YF++ D+S+NNLKG +P ++ S
Sbjct: 196 GSIPDVFGSHSYFMALDLSFNNLKGRVPSSLAS 228


>emb|CAE76632.1| leucine rich repeat protein [Cicer arietinum]
          Length = 368

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/93 (47%), Positives = 61/93 (65%)
 Frame = +3

Query: 9   LVDFDLSMNQISGFVPVELGSMPAXXXXXXXXXXXXGEIPGTLLSSFGLNIVNLSRNNFD 188
           L D DLSMN+++G VP ELG M              G+IP +LLS+ GL I+NLSRN F 
Sbjct: 228 LADLDLSMNRLTGSVPSELGKMQVLSTLNLDSNLLSGQIPSSLLSNSGLGILNLSRNGFS 287

Query: 189 GFLRDVFHPQTYFLSFDVSYNNLKGSIPQTIRS 287
           G + DVF P++YF++ D+S+NNL G +P ++ S
Sbjct: 288 GTIPDVFGPKSYFMALDMSFNNLNGRVPGSLLS 320


Top