BLASTX nr result
ID: Bupleurum21_contig00010907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00010907
(1454 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [... 417 e-114
ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arab... 410 e-112
ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thalian... 408 e-111
ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thal... 408 e-111
ref|XP_003546101.1| PREDICTED: tubby-like F-box protein 6-like [... 405 e-110
>ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [Vitis vinifera]
Length = 405
Score = 417 bits (1073), Expect = e-114
Identities = 230/370 (62%), Positives = 270/370 (72%), Gaps = 16/370 (4%)
Frame = -3
Query: 1260 SSVHVDASKQSVWANMPPELLRAVLMKIEESESFWPERQDVVACAGVCRNWRDIMKDIVK 1081
SS+ VDA +QS WANMPPELLR VLM+IE SES WP R++VVACAGVCR+WR+I K+IVK
Sbjct: 41 SSMVVDALRQSCWANMPPELLRDVLMRIEASESTWPPRKNVVACAGVCRSWREITKEIVK 100
Query: 1080 PVKISRMLTFPESVKQPGPRDKLIQCYIYRDPSNQSYHLYLSKYPTIYCYGKFLLSARKY 901
++S LTFP S+KQPGPR L+QCYI R+ SNQ+YHLYL GKFLL+ARK
Sbjct: 101 TPELSGKLTFPISLKQPGPRGSLLQCYIKRNRSNQTYHLYLGLNQASTDDGKFLLAARKC 160
Query: 900 RCPTCTDYNIYLTKHNV-RMSNYYIGKLSSNIIGTKFIISDTEDPKAGQLLNAAGRVKCR 724
R PTCTDY I L +V + S YIGKL SN +GTKF + D + P AG ++ K R
Sbjct: 161 RRPTCTDYIISLNADDVSKGSTTYIGKLRSNFLGTKFTVYDAQPPNAGARIS-----KSR 215
Query: 723 SA-RVGMKQVSLRGSIRDFPIAHISYELNVLGSRVPRRMHCVMNAIPLCAAE-----EAE 562
S R+G +QVS R ++P+AHISYELNVLGSR PRRM CVM+AIP A E +
Sbjct: 216 STRRLGSRQVSPRVPAGNYPVAHISYELNVLGSRGPRRMQCVMDAIPANAIEPGGVAPTQ 275
Query: 561 TEFV-RRVD-YP-FPLFRSKS------VSGSMSTAKDGILMLKNKTPKWHEQLQCWCLNF 409
TEFV VD +P FP FRSKS SG +S KD +L+LKNK P+WHEQLQCWCLNF
Sbjct: 276 TEFVLSNVDSFPSFPFFRSKSNRTESLHSGPLSGPKDEMLVLKNKAPRWHEQLQCWCLNF 335
Query: 408 NGRVTVASVKNFQLVACVDNTPIGLEPEKVVLQFGKVGKDVFTLDYQYPLSAFQAFAICL 229
NGRVTVASVKNFQLVA +N G E E V+LQFGKVGKDVFT+DYQYP+SAFQAFAICL
Sbjct: 336 NGRVTVASVKNFQLVASAENGVAGQEHENVILQFGKVGKDVFTMDYQYPISAFQAFAICL 395
Query: 228 TSFDTKNASD 199
+SFDTK A +
Sbjct: 396 SSFDTKIACE 405
>ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arabidopsis lyrata subsp.
lyrata] gi|297327975|gb|EFH58395.1| hypothetical protein
ARALYDRAFT_322431 [Arabidopsis lyrata subsp. lyrata]
Length = 407
Score = 410 bits (1053), Expect = e-112
Identities = 231/399 (57%), Positives = 280/399 (70%), Gaps = 26/399 (6%)
Frame = -3
Query: 1317 LESIYGKGF----GYWR---MKLPLGSSVHVDASKQSVWANMPPELLRAVLMKIEESESF 1159
L SI KGF GY R ++ +SV VDA KQS WANMPPELLR VLM+IE SE
Sbjct: 14 LGSISRKGFDVRFGYGRSRSQRVVQDTSVPVDAFKQSCWANMPPELLRDVLMRIELSEDT 73
Query: 1158 WPERQDVVACAGVCRNWRDIMKDIVKPVKISRMLTFPESVKQPGPRDKLIQCYIYRDPSN 979
WP R++VV+CAGVCRNWR+I+K+IVK ++S LTFP S+KQPGPR L+QCYI R+ SN
Sbjct: 74 WPSRKNVVSCAGVCRNWREIVKEIVKVPEVSSKLTFPISLKQPGPRGSLVQCYIMRNRSN 133
Query: 978 QSYHLYLSKYPTIYCY--GKFLLSARKYRCPTCTDYNIYLTKHNV-RMSNYYIGKLSSNI 808
Q+Y+LYL GKFLL+A+++R PTCTDY I L +V R SN YIGKL SN
Sbjct: 134 QTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNF 193
Query: 807 IGTKFIISDTEDPKAGQLLNAAGRVKCRSARV-GMKQVSLRGSIRDFPIAHISYELNVLG 631
+GTKF + D + G + + RS+R+ +KQVS R ++P+AHISYELNVLG
Sbjct: 194 LGTKFTVFDAQPTNPGTQVT-----RTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLG 248
Query: 630 SRVPRRMHCVMNAIPLCAAEEA-----ETEFVRR--VDYP-FPLFRSKSV------SGSM 493
SR PRRM CVM+AIP A E +TE + ++P F FRSKS+ SG
Sbjct: 249 SRGPRRMQCVMDAIPASAVEPGGTAPTQTELIHSNLENFPSFSFFRSKSIRAESLSSGPA 308
Query: 492 STA-KDGILMLKNKTPKWHEQLQCWCLNFNGRVTVASVKNFQLVACVDNTPIGLEPEKVV 316
S A K+G+L+LKNK P+WHEQLQCWCLNFNGRVTVASVKNFQLVA +N P G E E V+
Sbjct: 309 SAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGPEHENVI 368
Query: 315 LQFGKVGKDVFTLDYQYPLSAFQAFAICLTSFDTKNASD 199
LQFGKVGKDVFT+DYQYP+SAFQAF ICL+SFDTK A +
Sbjct: 369 LQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407
>ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
gi|79324947|ref|NP_001031558.1| Tubby-like F-box protein
3 [Arabidopsis thaliana]
gi|75248467|sp|Q8VY21.1|TLP3_ARATH RecName:
Full=Tubby-like F-box protein 3; Short=AtTLP3
gi|18377640|gb|AAL66970.1| putative tubby protein
[Arabidopsis thaliana] gi|20465543|gb|AAM20254.1|
putative tubby protein [Arabidopsis thaliana]
gi|27372514|gb|AAK98802.1| tubby-like protein 3
[Arabidopsis thaliana] gi|330255813|gb|AEC10907.1|
Tubby-like F-box protein 3 [Arabidopsis thaliana]
gi|330255814|gb|AEC10908.1| Tubby-like F-box protein 3
[Arabidopsis thaliana]
Length = 406
Score = 408 bits (1049), Expect = e-111
Identities = 230/398 (57%), Positives = 279/398 (70%), Gaps = 25/398 (6%)
Frame = -3
Query: 1317 LESIYGKGF----GYWR---MKLPLGSSVHVDASKQSVWANMPPELLRAVLMKIEESESF 1159
L SI KGF GY R ++ +SV VDA KQS WA+MPPELLR VLM+IE+SE
Sbjct: 14 LGSISRKGFDVRFGYGRSRSQRVVQDTSVPVDAFKQSCWASMPPELLRDVLMRIEQSEDT 73
Query: 1158 WPERQDVVACAGVCRNWRDIMKDIVKPVKISRMLTFPESVKQPGPRDKLIQCYIYRDPSN 979
WP R++VV+CAGVCRNWR+I+K+IV+ ++S LTFP S+KQPGPR L+QCYI R+ SN
Sbjct: 74 WPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSN 133
Query: 978 QSYHLYLS-KYPTIYCYGKFLLSARKYRCPTCTDYNIYLTKHNV-RMSNYYIGKLSSNII 805
Q+Y+LYL GKFLL+A+++R PTCTDY I L +V R SN YIGKL SN +
Sbjct: 134 QTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFL 193
Query: 804 GTKFIISDTEDPKAGQLLNAAGRVKCRSARV-GMKQVSLRGSIRDFPIAHISYELNVLGS 628
GTKF + D + G + + RS+R+ +KQVS R ++P+AHISYELNVLGS
Sbjct: 194 GTKFTVYDAQPTNPGTQVT-----RTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLGS 248
Query: 627 RVPRRMHCVMNAIPLCAAEEA-----ETEFVRRVDYPFP---LFRSKSV------SGSMS 490
R PRRM CVM+AIP A E +TE V FP FRSKS+ SG S
Sbjct: 249 RGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKSIRAESLPSGPSS 308
Query: 489 TA-KDGILMLKNKTPKWHEQLQCWCLNFNGRVTVASVKNFQLVACVDNTPIGLEPEKVVL 313
A K+G+L+LKNK P+WHEQLQCWCLNFNGRVTVASVKNFQLVA +N P G E E V+L
Sbjct: 309 AAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGPEHENVIL 368
Query: 312 QFGKVGKDVFTLDYQYPLSAFQAFAICLTSFDTKNASD 199
QFGKVGKDVFT+DYQYP+SAFQAF ICL+SFDTK A +
Sbjct: 369 QFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406
>ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
gi|3738302|gb|AAC63644.1| putative tubby protein
[Arabidopsis thaliana] gi|20197552|gb|AAM15124.1|
putative tubby protein [Arabidopsis thaliana]
gi|227204449|dbj|BAH57076.1| AT2G47900 [Arabidopsis
thaliana] gi|330255815|gb|AEC10909.1| Tubby-like F-box
protein 3 [Arabidopsis thaliana]
Length = 407
Score = 408 bits (1049), Expect = e-111
Identities = 230/399 (57%), Positives = 279/399 (69%), Gaps = 26/399 (6%)
Frame = -3
Query: 1317 LESIYGKGF----GYWR---MKLPLGSSVHVDASKQSVWANMPPELLRAVLMKIEESESF 1159
L SI KGF GY R ++ +SV VDA KQS WA+MPPELLR VLM+IE+SE
Sbjct: 14 LGSISRKGFDVRFGYGRSRSQRVVQDTSVPVDAFKQSCWASMPPELLRDVLMRIEQSEDT 73
Query: 1158 WPERQDVVACAGVCRNWRDIMKDIVKPVKISRMLTFPESVKQPGPRDKLIQCYIYRDPSN 979
WP R++VV+CAGVCRNWR+I+K+IV+ ++S LTFP S+KQPGPR L+QCYI R+ SN
Sbjct: 74 WPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSN 133
Query: 978 QSYHLYLSKYPTIYCY--GKFLLSARKYRCPTCTDYNIYLTKHNV-RMSNYYIGKLSSNI 808
Q+Y+LYL GKFLL+A+++R PTCTDY I L +V R SN YIGKL SN
Sbjct: 134 QTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNF 193
Query: 807 IGTKFIISDTEDPKAGQLLNAAGRVKCRSARV-GMKQVSLRGSIRDFPIAHISYELNVLG 631
+GTKF + D + G + + RS+R+ +KQVS R ++P+AHISYELNVLG
Sbjct: 194 LGTKFTVYDAQPTNPGTQVT-----RTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLG 248
Query: 630 SRVPRRMHCVMNAIPLCAAEEA-----ETEFVRRVDYPFP---LFRSKSV------SGSM 493
SR PRRM CVM+AIP A E +TE V FP FRSKS+ SG
Sbjct: 249 SRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKSIRAESLPSGPS 308
Query: 492 STA-KDGILMLKNKTPKWHEQLQCWCLNFNGRVTVASVKNFQLVACVDNTPIGLEPEKVV 316
S A K+G+L+LKNK P+WHEQLQCWCLNFNGRVTVASVKNFQLVA +N P G E E V+
Sbjct: 309 SAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGPEHENVI 368
Query: 315 LQFGKVGKDVFTLDYQYPLSAFQAFAICLTSFDTKNASD 199
LQFGKVGKDVFT+DYQYP+SAFQAF ICL+SFDTK A +
Sbjct: 369 LQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407
>ref|XP_003546101.1| PREDICTED: tubby-like F-box protein 6-like [Glycine max]
Length = 385
Score = 405 bits (1042), Expect = e-110
Identities = 215/365 (58%), Positives = 269/365 (73%), Gaps = 16/365 (4%)
Frame = -3
Query: 1245 DASKQSVWANMPPELLRAVLMKIEESESFWPERQDVVACAGVCRNWRDIMKDIVKPVKIS 1066
D+ +QS WANMP ELLR VL +IE SE WP R+ VVACAGVCR+WR I DIVK ++S
Sbjct: 26 DSMRQSCWANMPQELLREVLFRIEASEDAWPPRKSVVACAGVCRSWRQITIDIVKTPELS 85
Query: 1065 RMLTFPESVKQPGPRDKLIQCYIYRDPSNQSYHLYLSKYPTIYCYGKFLLSARKYRCPTC 886
+TFP SVKQPGPR+ L++C+I R+ S+Q+Y+LYLS T+ GKFLL+ARK R PTC
Sbjct: 86 SKITFPISVKQPGPRENLLRCFIKRNRSSQTYYLYLSLTNTLAEDGKFLLAARKCRRPTC 145
Query: 885 TDYNIYLTKHNV-RMSNYYIGKLSSNIIGTKFIISDTEDPKAGQLLNAAGRVKCRSAR-V 712
TDY I L ++ + SN Y+GKL SN +GTKF I D + P AG + +K RS R V
Sbjct: 146 TDYIISLDADDMSKGSNSYVGKLRSNFLGTKFTIYDGQPPHAGAKI-----MKSRSTRLV 200
Query: 711 GMKQVSLRGSIRDFPIAHISYELNVLGSRVPRRMHCVMNAIPLCAAEEA-----ETEF-V 550
+KQVS + ++P+AHISYELNVLGSR PRRMHCVM++IP A E +TEF +
Sbjct: 201 NLKQVSPKVPTGNYPVAHISYELNVLGSRGPRRMHCVMDSIPAAAIEPGGVAPVQTEFSL 260
Query: 549 RRVD-YP-FPLFRSKS------VSGSMSTAKDGILMLKNKTPKWHEQLQCWCLNFNGRVT 394
+D +P FP FRSKS VSG + KDG+L+LKNK P+WHEQLQCWCLNF+GRVT
Sbjct: 261 NNIDMFPSFPFFRSKSNRVENSVSGPLVDQKDGMLVLKNKAPRWHEQLQCWCLNFHGRVT 320
Query: 393 VASVKNFQLVACVDNTPIGLEPEKVVLQFGKVGKDVFTLDYQYPLSAFQAFAICLTSFDT 214
+ASVKNFQLVA +N P G E +K++LQFGKVGKD+FT+DY++P+SAFQAFAICL+SFDT
Sbjct: 321 IASVKNFQLVASAENRPAGPEHDKIILQFGKVGKDLFTMDYRFPISAFQAFAICLSSFDT 380
Query: 213 KNASD 199
K A +
Sbjct: 381 KIACE 385