BLASTX nr result

ID: Bupleurum21_contig00010892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010892
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, pu...    97   9e-23
ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...    95   1e-22
emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]    95   1e-22
emb|CBI24338.3| unnamed protein product [Vitis vinifera]               95   1e-22
ref|XP_003539243.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...    94   5e-22

>ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus
           communis] gi|223539889|gb|EEF41468.1| Protein
           SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus
           communis]
          Length = 276

 Score = 96.7 bits (239), Expect(2) = 9e-23
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +1

Query: 7   RRQALRPTLFFMPHCEAELYDNLLQANWRVDMLNRMVLFGNSFKEYQHLSSIYSNSTEAC 186
           RR   RPTLF+MPHCEAELY+NLLQANWRV++LNR+ LFGNSF+ YQ+LS  + NST   
Sbjct: 169 RRCVTRPTLFYMPHCEAELYNNLLQANWRVELLNRIALFGNSFEVYQYLSE-FRNSTIVD 227

Query: 187 LRKHILAATKFAEE 228
             +HI+A  +F  E
Sbjct: 228 SSRHIVAVREFTHE 241



 Score = 35.0 bits (79), Expect(2) = 9e-23
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 318 IDTVSDDYCRAFYGSSWHHFS 380
           I TVSDDY  AF+ SSWH FS
Sbjct: 244 IKTVSDDYFAAFHDSSWHFFS 264


>ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis
           vinifera]
          Length = 269

 Score = 95.1 bits (235), Expect(2) = 1e-22
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = +1

Query: 7   RRQALRPTLFFMPHCEAELYDNLLQANWRVDMLNRMVLFGNSFKEYQHLSSIYSNSTEAC 186
           RRQA +PTLFFMPHCEAELYDNLLQ NWR + +N +VLFGNSF  Y+   S + +ST   
Sbjct: 170 RRQASKPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVD 229

Query: 187 LRKHILAATKFAEE 228
             +HILA  KF  E
Sbjct: 230 SSRHILAVRKFTRE 243



 Score = 36.2 bits (82), Expect(2) = 1e-22
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +3

Query: 318 IDTVSDDYCRAFYGSSWHHFSL 383
           I TVSDDY  AF+ SSWH FSL
Sbjct: 246 IKTVSDDYFGAFHDSSWHFFSL 267


>emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]
          Length = 269

 Score = 95.1 bits (235), Expect(2) = 1e-22
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = +1

Query: 7   RRQALRPTLFFMPHCEAELYDNLLQANWRVDMLNRMVLFGNSFKEYQHLSSIYSNSTEAC 186
           RRQA +PTLFFMPHCEAELYDNLLQ NWR + +N +VLFGNSF  Y+   S + +ST   
Sbjct: 170 RRQASKPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVD 229

Query: 187 LRKHILAATKFAEE 228
             +HILA  KF  E
Sbjct: 230 SSRHILAVRKFTRE 243



 Score = 36.2 bits (82), Expect(2) = 1e-22
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +3

Query: 318 IDTVSDDYCRAFYGSSWHHFSL 383
           I TVSDDY  AF+ SSWH FSL
Sbjct: 246 IKTVSDDYFGAFHDSSWHFFSL 267


>emb|CBI24338.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 95.1 bits (235), Expect(2) = 1e-22
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = +1

Query: 7   RRQALRPTLFFMPHCEAELYDNLLQANWRVDMLNRMVLFGNSFKEYQHLSSIYSNSTEAC 186
           RRQA +PTLFFMPHCEAELYDNLLQ NWR + +N +VLFGNSF  Y+   S + +ST   
Sbjct: 161 RRQASKPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVD 220

Query: 187 LRKHILAATKFAEE 228
             +HILA  KF  E
Sbjct: 221 SSRHILAVRKFTRE 234



 Score = 36.2 bits (82), Expect(2) = 1e-22
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +3

Query: 318 IDTVSDDYCRAFYGSSWHHFSL 383
           I TVSDDY  AF+ SSWH FSL
Sbjct: 237 IKTVSDDYFGAFHDSSWHFFSL 258


>ref|XP_003539243.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Glycine
           max]
          Length = 276

 Score = 93.6 bits (231), Expect(2) = 5e-22
 Identities = 44/74 (59%), Positives = 55/74 (74%)
 Frame = +1

Query: 7   RRQALRPTLFFMPHCEAELYDNLLQANWRVDMLNRMVLFGNSFKEYQHLSSIYSNSTEAC 186
           RR+AL+PT+FFMPHCEAELY+NLLQANW++++L  MVLFGNSF+ Y+   S+  NS    
Sbjct: 168 RREALKPTMFFMPHCEAELYNNLLQANWKLNLLKNMVLFGNSFETYEQHVSLCKNSPILN 227

Query: 187 LRKHILAATKFAEE 228
              HILAA  F  E
Sbjct: 228 SMGHILAAQGFTNE 241



 Score = 35.8 bits (81), Expect(2) = 5e-22
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 318 IDTVSDDYCRAFYGSSWHHFS 380
           I TVSDDY  AF+ SSWH FS
Sbjct: 244 IQTVSDDYYNAFHDSSWHFFS 264


Top