BLASTX nr result

ID: Bupleurum21_contig00010868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010868
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314517.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   4e-09
ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   7e-09
ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicag...    64   2e-08
ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putativ...    62   4e-08

>ref|XP_002314517.1| predicted protein [Populus trichocarpa] gi|222863557|gb|EEF00688.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -1

Query: 309 DDSFSIVAGSNELDGGFLSLEEIDESAYGLEIPAFEGGGFKENVKSKKRKAKES----DN 142
           DD FS++AGS+EL+GGFLSLEEIDE  YGLEIP  +    KE  K+K +K K+S    D 
Sbjct: 47  DDPFSVIAGSHELEGGFLSLEEIDEGDYGLEIPGLDKKVKKER-KNKSKKQKDSDADADG 105

Query: 141 VGDDEDTKGVEVE 103
           V ++ + +G+ VE
Sbjct: 106 VEEEVEEEGINVE 118


>ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
           gi|296083755|emb|CBI23744.3| unnamed protein product
           [Vitis vinifera]
          Length = 788

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = -1

Query: 309 DDSFSIVAGSNELDGGFLSLEEIDESAYGLEI----PAFEGGGFKENVKSKKRKAKESDN 142
           DD FS+  GS+EL+GGFLSLEEIDES YGLEI    P  + G  K++ KSKKRK+     
Sbjct: 35  DDPFSLFVGSDELEGGFLSLEEIDESEYGLEIHEPGPEDKKGNPKQSKKSKKRKS----- 89

Query: 141 VGDDEDTKGVEVE 103
              D D+ G  VE
Sbjct: 90  -SGDNDSSGGGVE 101


>ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
           max]
          Length = 810

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/58 (55%), Positives = 45/58 (77%)
 Frame = -1

Query: 312 NDDSFSIVAGSNELDGGFLSLEEIDESAYGLEIPAFEGGGFKENVKSKKRKAKESDNV 139
           +DD+FS+  GSNEL+GGFLSLEEIDE+ YGL IP  E     +  K+KK+K+++++NV
Sbjct: 45  DDDAFSLFIGSNELEGGFLSLEEIDEAEYGLSIPEPE----VDKRKTKKKKSEQNENV 98


>ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 798

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 38/57 (66%)
 Frame = -1

Query: 312 NDDSFSIVAGSNELDGGFLSLEEIDESAYGLEIPAFEGGGFKENVKSKKRKAKESDN 142
           ND SFS+  GSNEL+GGFLSLEEIDE+ YGL IP  E    K N K  K+  K+  +
Sbjct: 44  NDASFSLFTGSNELEGGFLSLEEIDEAEYGLNIPDPENHDRKHNSKPDKKSNKQKQD 100


>ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 496

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -1

Query: 309 DDSFSIVAGSNELDGGFLSLEEIDESAYGLEIPAFEGGGFKENVKSKKRKAKESD 145
           DD FS   GS+EL+GGFLSLEEIDE  YG EIP  E G   + +KSKK+K  ++D
Sbjct: 46  DDPFSGFVGSHELEGGFLSLEEIDEVDYGFEIPKPEKGKTGKKLKSKKQKHNDAD 100


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