BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010860
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   516   e-144
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              516   e-144
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   503   e-140

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  516 bits (1329), Expect = e-144
 Identities = 245/325 (75%), Positives = 284/325 (87%)
 Frame = -2

Query: 1349 DIPMELLLRIVSLVDDRTVVVASGVCSGWRDAICWGLTRFSLSWCKKNMNNLVISLIPKF 1170
            D+PMELLLRIV+LVDDRTV++ASGVCSGWRDAIC GLT  SLSWCK NMNNLV+SL PKF
Sbjct: 41   DVPMELLLRIVALVDDRTVIMASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKF 100

Query: 1169 SKLQGLVLRQDNSQLQDNAVETIANCCHDLQDLDLSKSFKLTDRSLYALAHGCPSLTRLN 990
            +KLQ L LRQD  QL+D AVE IAN CHDLQDLDLSKSFKL+D SLYALAHGCP+LT+LN
Sbjct: 101  TKLQALTLRQDKPQLEDKAVEIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLN 160

Query: 989  ISGCSAFSNTALSYLSNFCRKLQNLNLCGCVEAASDSALKAIGYNCPQLQYLNLGWCENV 810
            ISGC+AFS+ AL++L++FCR+L+ LNLCGC +AAS+ AL+AIG NC QLQ LNLGWCE+V
Sbjct: 161  ISGCTAFSDAALAHLTSFCRRLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDV 220

Query: 809  GDIGVTSLAYGCPDLRALDLCGCVLITDASVVALANNCPNLQSLGLYYCQNITDTAIYAL 630
             D GV SLAYGCPDLRALDLCGCV ITD SV+ALAN C +L+SLGLY+CQNITD A+Y+L
Sbjct: 221  SDAGVMSLAYGCPDLRALDLCGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSL 280

Query: 629  AHAQVKNKHNAWETVKNRYEKKGLRNLNISQCTALTPPAVQALCNSSPELHTCPGRHSLI 450
            A ++VKNKH  WE++K+RY ++GL NLNISQCTALTPPAVQA+C+S P LHTCPGRHSLI
Sbjct: 281  AQSRVKNKHEMWESMKSRYSEEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLI 340

Query: 449  ISGCLSLTSVHCACAGQAPRATNNV 375
            ISGCLSLTSVHCAC  QA R  + +
Sbjct: 341  ISGCLSLTSVHCACGVQAHRTASQL 365


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  516 bits (1329), Expect = e-144
 Identities = 245/325 (75%), Positives = 284/325 (87%)
 Frame = -2

Query: 1349 DIPMELLLRIVSLVDDRTVVVASGVCSGWRDAICWGLTRFSLSWCKKNMNNLVISLIPKF 1170
            D+PMELLLRIV+LVDDRTV++ASGVCSGWRDAIC GLT  SLSWCK NMNNLV+SL PKF
Sbjct: 99   DVPMELLLRIVALVDDRTVIMASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKF 158

Query: 1169 SKLQGLVLRQDNSQLQDNAVETIANCCHDLQDLDLSKSFKLTDRSLYALAHGCPSLTRLN 990
            +KLQ L LRQD  QL+D AVE IAN CHDLQDLDLSKSFKL+D SLYALAHGCP+LT+LN
Sbjct: 159  TKLQALTLRQDKPQLEDKAVEIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLN 218

Query: 989  ISGCSAFSNTALSYLSNFCRKLQNLNLCGCVEAASDSALKAIGYNCPQLQYLNLGWCENV 810
            ISGC+AFS+ AL++L++FCR+L+ LNLCGC +AAS+ AL+AIG NC QLQ LNLGWCE+V
Sbjct: 219  ISGCTAFSDAALAHLTSFCRRLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDV 278

Query: 809  GDIGVTSLAYGCPDLRALDLCGCVLITDASVVALANNCPNLQSLGLYYCQNITDTAIYAL 630
             D GV SLAYGCPDLRALDLCGCV ITD SV+ALAN C +L+SLGLY+CQNITD A+Y+L
Sbjct: 279  SDAGVMSLAYGCPDLRALDLCGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSL 338

Query: 629  AHAQVKNKHNAWETVKNRYEKKGLRNLNISQCTALTPPAVQALCNSSPELHTCPGRHSLI 450
            A ++VKNKH  WE++K+RY ++GL NLNISQCTALTPPAVQA+C+S P LHTCPGRHSLI
Sbjct: 339  AQSRVKNKHEMWESMKSRYSEEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLI 398

Query: 449  ISGCLSLTSVHCACAGQAPRATNNV 375
            ISGCLSLTSVHCAC  QA R  + +
Sbjct: 399  ISGCLSLTSVHCACGVQAHRTASQL 423


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  510 bits (1314), Expect = e-142
 Identities = 241/324 (74%), Positives = 281/324 (86%)
 Frame = -2

Query: 1349 DIPMELLLRIVSLVDDRTVVVASGVCSGWRDAICWGLTRFSLSWCKKNMNNLVISLIPKF 1170
            DIP+ELLLRIVSLVDDRTV++ASGVCSGWRDAIC GLT   LSWCK NMNNLV+SL PKF
Sbjct: 34   DIPVELLLRIVSLVDDRTVIMASGVCSGWRDAICMGLTHLCLSWCKNNMNNLVLSLAPKF 93

Query: 1169 SKLQGLVLRQDNSQLQDNAVETIANCCHDLQDLDLSKSFKLTDRSLYALAHGCPSLTRLN 990
            +KLQ LVLRQD  QL+D+AVETIA+ CHDLQDLDLSKSFKL+D SLYALAHGCP+LT+LN
Sbjct: 94   TKLQTLVLRQDKPQLEDHAVETIASYCHDLQDLDLSKSFKLSDLSLYALAHGCPNLTKLN 153

Query: 989  ISGCSAFSNTALSYLSNFCRKLQNLNLCGCVEAASDSALKAIGYNCPQLQYLNLGWCENV 810
            ISGC+AFS+  L YL+ FC+KL+ LNLCGCV+ A+D AL+ IG NC QLQ LNLGWCENV
Sbjct: 154  ISGCTAFSDDGLEYLTEFCQKLKFLNLCGCVKGATDRALQGIGRNCSQLQTLNLGWCENV 213

Query: 809  GDIGVTSLAYGCPDLRALDLCGCVLITDASVVALANNCPNLQSLGLYYCQNITDTAIYAL 630
            GD+GV SLAYGCPDLR LDLCGCV ITD SV+ALAN CP+L+SLGLYYC+NITD A+Y+L
Sbjct: 214  GDVGVMSLAYGCPDLRTLDLCGCVCITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSL 273

Query: 629  AHAQVKNKHNAWETVKNRYEKKGLRNLNISQCTALTPPAVQALCNSSPELHTCPGRHSLI 450
             H +VKNK + WE++K R +++GL  LNISQCTALTPPAVQALC+S P LHTC GRHSL+
Sbjct: 274  VHNRVKNKLSMWESMKGRCDEEGLSRLNISQCTALTPPAVQALCDSFPALHTCSGRHSLV 333

Query: 449  ISGCLSLTSVHCACAGQAPRATNN 378
            +SGCL+LTSVHC CA QA R+ ++
Sbjct: 334  MSGCLNLTSVHCVCAVQAHRSASS 357


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  504 bits (1299), Expect = e-140
 Identities = 238/325 (73%), Positives = 280/325 (86%)
 Frame = -2

Query: 1349 DIPMELLLRIVSLVDDRTVVVASGVCSGWRDAICWGLTRFSLSWCKKNMNNLVISLIPKF 1170
            DIPM+LLLRIVSLVDDRT+++ASGVCSGWRDAIC GLT   LSWCK NMNNLV+SL PKF
Sbjct: 29   DIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNLVLSLAPKF 88

Query: 1169 SKLQGLVLRQDNSQLQDNAVETIANCCHDLQDLDLSKSFKLTDRSLYALAHGCPSLTRLN 990
            +KLQ LVLRQD  QL+DNAVETIA+ CHDLQDLDLSKSFKL+D SLYALAHG P+LT+LN
Sbjct: 89   TKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDLSKSFKLSDLSLYALAHGFPNLTKLN 148

Query: 989  ISGCSAFSNTALSYLSNFCRKLQNLNLCGCVEAASDSALKAIGYNCPQLQYLNLGWCENV 810
            ISGC+AFS+ +L YL+ FCRKL+ LNLCGCV  A+D AL+AIG NC QLQ LNLGWCENV
Sbjct: 149  ISGCTAFSDVSLEYLTEFCRKLKILNLCGCVNGATDRALQAIGRNCSQLQSLNLGWCENV 208

Query: 809  GDIGVTSLAYGCPDLRALDLCGCVLITDASVVALANNCPNLQSLGLYYCQNITDTAIYAL 630
             D+GV SLAYGCPD+R LDLCGCV ITD SV+ALAN CP+L+SL LYYC+NITD A+Y+L
Sbjct: 209  SDVGVMSLAYGCPDIRTLDLCGCVCITDDSVIALANRCPHLRSLCLYYCRNITDRAMYSL 268

Query: 629  AHAQVKNKHNAWETVKNRYEKKGLRNLNISQCTALTPPAVQALCNSSPELHTCPGRHSLI 450
             H +VKNK   WE++K RY+++GL++LNISQCTA+TPPAVQALC+S P LHTC GRHSL+
Sbjct: 269  VHNRVKNKPAMWESMKGRYDEEGLKSLNISQCTAITPPAVQALCDSFPALHTCSGRHSLV 328

Query: 449  ISGCLSLTSVHCACAGQAPRATNNV 375
            +SGC +LTSVHCACA QA    +++
Sbjct: 329  MSGCWNLTSVHCACAVQAHHTASSI 353


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 373

 Score =  503 bits (1295), Expect = e-140
 Identities = 240/320 (75%), Positives = 277/320 (86%)
 Frame = -2

Query: 1349 DIPMELLLRIVSLVDDRTVVVASGVCSGWRDAICWGLTRFSLSWCKKNMNNLVISLIPKF 1170
            DIPMELLLRIVSLVDDRT+++ASGVCSGWRDAIC GLT   LSWCK +MNNLV+ L PKF
Sbjct: 44   DIPMELLLRIVSLVDDRTIIMASGVCSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKF 103

Query: 1169 SKLQGLVLRQDNSQLQDNAVETIANCCHDLQDLDLSKSFKLTDRSLYALAHGCPSLTRLN 990
            +KL+ LVLRQD  QL+DNAVE IA  CHDL+DLDLSKSFKLTD SLYALAHGCP+LT+LN
Sbjct: 104  TKLETLVLRQDKPQLEDNAVEAIARYCHDLEDLDLSKSFKLTDCSLYALAHGCPNLTKLN 163

Query: 989  ISGCSAFSNTALSYLSNFCRKLQNLNLCGCVEAASDSALKAIGYNCPQLQYLNLGWCENV 810
            ISGC++FS+  L YL+ FCRKL+ LNLCGCV+AA+D AL+AIG NC QLQ LNLGWCENV
Sbjct: 164  ISGCTSFSDGGLEYLTGFCRKLKILNLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENV 223

Query: 809  GDIGVTSLAYGCPDLRALDLCGCVLITDASVVALANNCPNLQSLGLYYCQNITDTAIYAL 630
            GD+GV SLAYGCPDLR LDLCGCV ITD SV+ALA  C +L+SLGLYYC+NITD A+Y+L
Sbjct: 224  GDVGVMSLAYGCPDLRTLDLCGCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSL 283

Query: 629  AHAQVKNKHNAWETVKNRYEKKGLRNLNISQCTALTPPAVQALCNSSPELHTCPGRHSLI 450
             H++VKNK   WE+VK R +++GLR+LNISQCTALTPPAVQALC+  P LHTC GRHSL+
Sbjct: 284  VHSRVKNKPAMWESVKGRCDEEGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLV 343

Query: 449  ISGCLSLTSVHCACAGQAPR 390
            +SGCL+LTSVHCACA QA R
Sbjct: 344  MSGCLNLTSVHCACAVQAHR 363