BLASTX nr result

ID: Bupleurum21_contig00010839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010839
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   310   1e-82
emb|CBI16487.3| unnamed protein product [Vitis vinifera]              310   1e-82
ref|XP_002530869.1| Ubiquitin-protein ligase bre-1, putative [Ri...   286   2e-75
ref|XP_004166754.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   258   6e-67
ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   258   6e-67

>ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Vitis
           vinifera]
          Length = 872

 Score =  310 bits (795), Expect = 1e-82
 Identities = 161/227 (70%), Positives = 192/227 (84%)
 Frame = -2

Query: 683 SPEKYSDKSMGLRELKDSIEETKILASDRLAEVQDACEDNLILSKQLQDLQNELKDDKFV 504
           SPEK++D++MG RELKDS+EETKILA+DRL+E+ +A EDNLILSKQLQDLQNELKDDK+V
Sbjct: 288 SPEKHADRTMGFRELKDSVEETKILAADRLSELHEAQEDNLILSKQLQDLQNELKDDKYV 347

Query: 503 HSSRPYTLLNDRLQHWSAEAERYKILTDTLQADRSFVMRREKELNAKAESACVVKNEINN 324
           +SSRPYTLLND+LQHW+AEAERYK+LTD+LQADR+ V+RREKELNAK+E A   ++ I N
Sbjct: 348 YSSRPYTLLNDQLQHWNAEAERYKLLTDSLQADRAQVVRREKELNAKSELADAARSVIEN 407

Query: 323 AESKIAELEQQLQKCVXXXXXXXXXXXETVEDSGRKDIKAEFQVMASALSKELGLMESQL 144
            +SKI ELE QLQKC+           E ++DSGRKDIKAEF VMASALSKE+G+MESQL
Sbjct: 408 -DSKIEELELQLQKCLIEKNDLEVKMKEALQDSGRKDIKAEFHVMASALSKEMGMMESQL 466

Query: 143 SRWKETAGEAVSLSEEAQSLKALLNNKTSEHKNLVDKCAEQMAKIKS 3
           +RWKETA EA+SL E+ QSLKALLN KT+E K L DKC EQM +IKS
Sbjct: 467 NRWKETAHEALSLREQVQSLKALLNKKTNEQKCLADKCEEQMVEIKS 513


>emb|CBI16487.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score =  310 bits (795), Expect = 1e-82
 Identities = 161/227 (70%), Positives = 192/227 (84%)
 Frame = -2

Query: 683 SPEKYSDKSMGLRELKDSIEETKILASDRLAEVQDACEDNLILSKQLQDLQNELKDDKFV 504
           SPEK++D++MG RELKDS+EETKILA+DRL+E+ +A EDNLILSKQLQDLQNELKDDK+V
Sbjct: 295 SPEKHADRTMGFRELKDSVEETKILAADRLSELHEAQEDNLILSKQLQDLQNELKDDKYV 354

Query: 503 HSSRPYTLLNDRLQHWSAEAERYKILTDTLQADRSFVMRREKELNAKAESACVVKNEINN 324
           +SSRPYTLLND+LQHW+AEAERYK+LTD+LQADR+ V+RREKELNAK+E A   ++ I N
Sbjct: 355 YSSRPYTLLNDQLQHWNAEAERYKLLTDSLQADRAQVVRREKELNAKSELADAARSVIEN 414

Query: 323 AESKIAELEQQLQKCVXXXXXXXXXXXETVEDSGRKDIKAEFQVMASALSKELGLMESQL 144
            +SKI ELE QLQKC+           E ++DSGRKDIKAEF VMASALSKE+G+MESQL
Sbjct: 415 -DSKIEELELQLQKCLIEKNDLEVKMKEALQDSGRKDIKAEFHVMASALSKEMGMMESQL 473

Query: 143 SRWKETAGEAVSLSEEAQSLKALLNNKTSEHKNLVDKCAEQMAKIKS 3
           +RWKETA EA+SL E+ QSLKALLN KT+E K L DKC EQM +IKS
Sbjct: 474 NRWKETAHEALSLREQVQSLKALLNKKTNEQKCLADKCEEQMVEIKS 520


>ref|XP_002530869.1| Ubiquitin-protein ligase bre-1, putative [Ricinus communis]
            gi|223529558|gb|EEF31509.1| Ubiquitin-protein ligase
            bre-1, putative [Ricinus communis]
          Length = 945

 Score =  286 bits (733), Expect = 2e-75
 Identities = 145/227 (63%), Positives = 184/227 (81%)
 Frame = -2

Query: 683  SPEKYSDKSMGLRELKDSIEETKILASDRLAEVQDACEDNLILSKQLQDLQNELKDDKFV 504
            SPEK ++KS GLRELKDSIEETKILA+DRL+E+Q+A ++N ILSK+L+ LQNELKDDK++
Sbjct: 360  SPEKPTEKSKGLRELKDSIEETKILAADRLSELQEAQDENQILSKELEYLQNELKDDKYI 419

Query: 503  HSSRPYTLLNDRLQHWSAEAERYKILTDTLQADRSFVMRREKELNAKAESACVVKNEINN 324
            HS R Y L+ND+LQHW+A+ +RYK LT+ LQADRSF++RREKE+NAK ES    +N I+ 
Sbjct: 420  HSCRLYNLVNDQLQHWNADIQRYKALTEPLQADRSFLVRREKEVNAKVESVDAARNTIDT 479

Query: 323  AESKIAELEQQLQKCVXXXXXXXXXXXETVEDSGRKDIKAEFQVMASALSKELGLMESQL 144
            +ES+I ELE QL KC+           E ++DSGRKDIKAEF VMA+ALSKE+G+ME+QL
Sbjct: 480  SESRIEELELQLHKCIIEKNDLEVKMEEAMQDSGRKDIKAEFHVMAAALSKEMGMMEAQL 539

Query: 143  SRWKETAGEAVSLSEEAQSLKALLNNKTSEHKNLVDKCAEQMAKIKS 3
             RWKETA EA+SL +EAQSL+ LL+ KT+E K+L  KCAEQM +IKS
Sbjct: 540  KRWKETAHEALSLCKEAQSLRILLSEKTNEQKSLTSKCAEQMLEIKS 586


>ref|XP_004166754.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           BRE1-like 2-like [Cucumis sativus]
          Length = 880

 Score =  258 bits (660), Expect = 6e-67
 Identities = 137/227 (60%), Positives = 173/227 (76%)
 Frame = -2

Query: 683 SPEKYSDKSMGLRELKDSIEETKILASDRLAEVQDACEDNLILSKQLQDLQNELKDDKFV 504
           SP+K +++++G RELK+SIEETKILA+DRL+E QDA EDNL LS QLQDL+N+  D+K+V
Sbjct: 295 SPQKPAERTIGFRELKESIEETKILAADRLSEFQDAWEDNLTLSSQLQDLENDWMDEKYV 354

Query: 503 HSSRPYTLLNDRLQHWSAEAERYKILTDTLQADRSFVMRREKELNAKAESACVVKNEINN 324
           HSSR Y LLND+LQH +AE +RYK LT+ LQ DRS V+RREK+LNAK ES  V ++ ++N
Sbjct: 355 HSSRLYILLNDQLQHLTAEVDRYKSLTEALQTDRSHVIRREKDLNAKLESVDVARSSMDN 414

Query: 323 AESKIAELEQQLQKCVXXXXXXXXXXXETVEDSGRKDIKAEFQVMASALSKELGLMESQL 144
             S+I ELE QLQK +           E V+DS R+DIK EF VMASALSKE+G+MESQL
Sbjct: 415 NCSRIEELEHQLQKILVXKNDLEIEMEEAVQDSAREDIKGEFHVMASALSKEMGMMESQL 474

Query: 143 SRWKETAGEAVSLSEEAQSLKALLNNKTSEHKNLVDKCAEQMAKIKS 3
            RWK+TA EAVS+ E+ Q+L+  L  KT E K L D CA+QM +IKS
Sbjct: 475 KRWKDTAHEAVSIREKVQALETSLAMKTKEKKGLTDICAQQMMEIKS 521


>ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Cucumis
           sativus]
          Length = 880

 Score =  258 bits (660), Expect = 6e-67
 Identities = 136/227 (59%), Positives = 172/227 (75%)
 Frame = -2

Query: 683 SPEKYSDKSMGLRELKDSIEETKILASDRLAEVQDACEDNLILSKQLQDLQNELKDDKFV 504
           SP+K +++++G RELK+SIEETKILA+DRL+E QDA EDNL LS QLQDL+N+  D+K+V
Sbjct: 295 SPQKPAERTIGFRELKESIEETKILAADRLSEFQDAWEDNLTLSSQLQDLENDWMDEKYV 354

Query: 503 HSSRPYTLLNDRLQHWSAEAERYKILTDTLQADRSFVMRREKELNAKAESACVVKNEINN 324
           HSSR Y LLND+LQH +AE +RYK LT+ LQ DRS V+RREK+LNAK ES  V ++ ++N
Sbjct: 355 HSSRLYILLNDQLQHLTAEVDRYKSLTEALQTDRSHVIRREKDLNAKLESVDVARSSMDN 414

Query: 323 AESKIAELEQQLQKCVXXXXXXXXXXXETVEDSGRKDIKAEFQVMASALSKELGLMESQL 144
             S+I ELE QLQK +           E V+DS R+DIK EF VMASALSKE+G+MESQL
Sbjct: 415 NCSRIEELEHQLQKILVEKNDLEIEMEEAVQDSAREDIKGEFHVMASALSKEMGMMESQL 474

Query: 143 SRWKETAGEAVSLSEEAQSLKALLNNKTSEHKNLVDKCAEQMAKIKS 3
            RWK+TA EAVS+ E+ Q+L+  L  KT E K L D CA+QM +IKS
Sbjct: 475 KRWKDTAHEAVSIREKVQALETSLAMKTKEKKGLTDICAQQMMEIKS 521


Top