BLASTX nr result

ID: Bupleurum21_contig00010809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010809
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV74320.1| isopentenyl diphosphate isomerase [Bupleurum chin...    70   2e-10

>gb|ACV74320.1| isopentenyl diphosphate isomerase [Bupleurum chinense]
          Length = 319

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/77 (54%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = -2

Query: 226 IYNTTSNNIYRTNTISASAAALSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--QR 53
           IYNTTSNNIYRTNTISASAAALSC                                  QR
Sbjct: 40  IYNTTSNNIYRTNTISASAAALSCVSTHIRSSHSHSSSIAASAGTAMADVADSTMDAVQR 99

Query: 52  RLMFDDECILVDENDRV 2
           RLMFDDECILVDEND V
Sbjct: 100 RLMFDDECILVDENDHV 116


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