BLASTX nr result

ID: Bupleurum21_contig00010797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010797
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274055.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   236   3e-60
emb|CBI16629.3| unnamed protein product [Vitis vinifera]              236   3e-60
ref|XP_002511625.1| protein binding protein, putative [Ricinus c...   231   1e-58
ref|XP_002302510.1| histone ubiquitination proteins group [Popul...   225   7e-57
ref|XP_003622604.1| E3 ubiquitin-protein ligase BRE1-like protei...   213   3e-53

>ref|XP_002274055.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Vitis
           vinifera]
          Length = 901

 Score =  236 bits (603), Expect = 3e-60
 Identities = 133/264 (50%), Positives = 179/264 (67%), Gaps = 10/264 (3%)
 Frame = -1

Query: 765 KENSTTISPVSASQFKNDTVNHSMEFQLDTKVLQFQNLKLVQKLEAQNVECIALENKFNQ 586
           + + +++SP +A+  K   +  S + +LDT VLQ+QN KL QKLEAQ VEC ALENKF+Q
Sbjct: 11  RRHFSSLSPTAATAKKMPFLPVSEDKKLDTAVLQYQNQKLKQKLEAQKVECSALENKFSQ 70

Query: 585 LRDKQLPYDNTLEVVHKTWEQVVEDLETSSKRVKHCNGICVDSITKSNEGDGGSSLRGDE 406
           L++ Q  Y+ TL +V+KTW ++V++LET S  +K            S   DG S L+ D 
Sbjct: 71  LKETQQSYNTTLTLVNKTWRELVDNLETCSVHLKDSASAGRHVKLPSTTEDGNSCLQ-DA 129

Query: 405 FFRRLIETGATES-------SQVDEDRQILGERAKNILSNVIDGIDSLWCLKGGLYAAA- 250
           F  RLIETGATES        +++EDR     + KN LSN++  I+ LWCLK GLYAA  
Sbjct: 130 FLSRLIETGATESCSANDFSDRMEEDRPTSCGKTKNSLSNIVSTINDLWCLKDGLYAAVL 189

Query: 249 -QLPDDGPCSQH-TNDLEIEVERLRLQISDLHLKHRTLSRELQSHRDTDAKNKADLKHLR 76
             LP+DG C++  ++DL  EV  +RL   DLHLKH++++R++QSHRD DAKNKA+LK LR
Sbjct: 190 EALPEDGLCNKKISSDLHAEVNNMRLAFGDLHLKHKSVTRDMQSHRDIDAKNKAELKRLR 249

Query: 75  GELESTTAELDESNRRLETLKSER 4
           GELEST AEL+ESN +L TLK+ER
Sbjct: 250 GELESTVAELEESNCKLVTLKAER 273


>emb|CBI16629.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  236 bits (603), Expect = 3e-60
 Identities = 133/264 (50%), Positives = 179/264 (67%), Gaps = 10/264 (3%)
 Frame = -1

Query: 765 KENSTTISPVSASQFKNDTVNHSMEFQLDTKVLQFQNLKLVQKLEAQNVECIALENKFNQ 586
           + + +++SP +A+  K   +  S + +LDT VLQ+QN KL QKLEAQ VEC ALENKF+Q
Sbjct: 11  RRHFSSLSPTAATAKKMPFLPVSEDKKLDTAVLQYQNQKLKQKLEAQKVECSALENKFSQ 70

Query: 585 LRDKQLPYDNTLEVVHKTWEQVVEDLETSSKRVKHCNGICVDSITKSNEGDGGSSLRGDE 406
           L++ Q  Y+ TL +V+KTW ++V++LET S  +K            S   DG S L+ D 
Sbjct: 71  LKETQQSYNTTLTLVNKTWRELVDNLETCSVHLKDSASAGRHVKLPSTTEDGNSCLQ-DA 129

Query: 405 FFRRLIETGATES-------SQVDEDRQILGERAKNILSNVIDGIDSLWCLKGGLYAAA- 250
           F  RLIETGATES        +++EDR     + KN LSN++  I+ LWCLK GLYAA  
Sbjct: 130 FLSRLIETGATESCSANDFSDRMEEDRPTSCGKTKNSLSNIVSTINDLWCLKDGLYAAVL 189

Query: 249 -QLPDDGPCSQH-TNDLEIEVERLRLQISDLHLKHRTLSRELQSHRDTDAKNKADLKHLR 76
             LP+DG C++  ++DL  EV  +RL   DLHLKH++++R++QSHRD DAKNKA+LK LR
Sbjct: 190 EALPEDGLCNKKISSDLHAEVNNMRLAFGDLHLKHKSVTRDMQSHRDIDAKNKAELKRLR 249

Query: 75  GELESTTAELDESNRRLETLKSER 4
           GELEST AEL+ESN +L TLK+ER
Sbjct: 250 GELESTVAELEESNCKLVTLKAER 273


>ref|XP_002511625.1| protein binding protein, putative [Ricinus communis]
           gi|223548805|gb|EEF50294.1| protein binding protein,
           putative [Ricinus communis]
          Length = 420

 Score =  231 bits (589), Expect = 1e-58
 Identities = 134/265 (50%), Positives = 177/265 (66%), Gaps = 11/265 (4%)
 Frame = -1

Query: 765 KENSTTISPVSASQFKNDTVNHSMEFQ-LDTKVLQFQNLKLVQKLEAQNVECIALENKFN 589
           + +  +IS  +A+  K    +HS E + LDT VLQFQN KLVQKLEAQ VE  ALENK+ 
Sbjct: 11  RRHFNSISSPTAAMAKKQPFSHSSEDKKLDTAVLQFQNQKLVQKLEAQKVEYSALENKYT 70

Query: 588 QLRDKQLPYDNTLEVVHKTWEQVVEDLETSSKRVKHCNGICVDSITKSNEGDGGSSLRGD 409
           QL++KQ PYD+TL+ V+K+W  +V DLE  S R +  N I  +  + S   DG SS   D
Sbjct: 71  QLKEKQQPYDSTLKAVNKSWGVLVTDLEVHSNRTRESN-IGQNIRSFSINEDGVSSSFED 129

Query: 408 EFFRRLIETGATESSQV-------DEDRQILGERAKNILSNVIDGIDSLWCLKGGLYAAA 250
            F  RL ETGATE+S +       +ED +   E+ KN+L N++  I+ LW LK GL+AA 
Sbjct: 130 AFLSRLAETGATETSSINNCLNHIEEDEENTSEKIKNMLYNIVSAINDLWHLKDGLHAAL 189

Query: 249 --QLPDDGPCSQHTN-DLEIEVERLRLQISDLHLKHRTLSRELQSHRDTDAKNKADLKHL 79
             ++ +DG C Q  +  LE EV+ LRL +SDLHLKH+T +RELQSHRD DAKNKA+L  L
Sbjct: 190 LKEISEDGACRQKESYGLEAEVKNLRLALSDLHLKHKTFARELQSHRDIDAKNKAELNRL 249

Query: 78  RGELESTTAELDESNRRLETLKSER 4
           +GELES  +EL+ESN +L +LK+ER
Sbjct: 250 KGELESAVSELEESNCKLASLKAER 274


>ref|XP_002302510.1| histone ubiquitination proteins group [Populus trichocarpa]
           gi|222844236|gb|EEE81783.1| histone ubiquitination
           proteins group [Populus trichocarpa]
          Length = 877

 Score =  225 bits (574), Expect = 7e-57
 Identities = 128/238 (53%), Positives = 166/238 (69%), Gaps = 11/238 (4%)
 Frame = -1

Query: 684 LDTKVLQFQNLKLVQKLEAQNVECIALENKFNQLRDKQLPYDNTLEVVHKTWEQVVEDLE 505
           LDT VLQ+QN KL QKLEAQ VE  AL N+F+QL++KQ PY++TL  V+K+WE +V DLE
Sbjct: 31  LDTTVLQYQNQKLQQKLEAQKVEHFALGNRFSQLKEKQQPYNSTLNAVNKSWEVLVSDLE 90

Query: 504 TSSKRVKH-CNGICVDSITKSNEGDGGSSLRGDEFFRRLIETGATESS-------QVDED 349
           T S R +   NG  V  I  +   D  SS   D F  RL+ETGATESS       Q++ D
Sbjct: 91  TCSNRTREWSNGQDVKHIPVTK--DESSSFLKDAFLSRLMETGATESSSSNNCPDQMEVD 148

Query: 348 RQILGERAKNILSNVIDGIDSLWCLKGGLYAAA--QLPDDGPCSQHT-NDLEIEVERLRL 178
            +   E+ KN++ N++D I+ LW LK GL+AA   QLP+D  C Q T N+LE+E++ LR 
Sbjct: 149 IETAFEKNKNVVHNIVDTINGLWHLKDGLHAAVLKQLPEDDACRQMTSNELEMELKNLRS 208

Query: 177 QISDLHLKHRTLSRELQSHRDTDAKNKADLKHLRGELESTTAELDESNRRLETLKSER 4
            +SDLHLKH++L+ ELQ+HRD DAKNKA+LKHL+GELE   AEL +SN +L TLK+ER
Sbjct: 209 GLSDLHLKHKSLAMELQNHRDADAKNKAELKHLKGELEIAVAELKDSNCKLATLKAER 266


>ref|XP_003622604.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
           gi|355497619|gb|AES78822.1| E3 ubiquitin-protein ligase
           BRE1-like protein [Medicago truncatula]
          Length = 947

 Score =  213 bits (543), Expect = 3e-53
 Identities = 123/288 (42%), Positives = 176/288 (61%), Gaps = 34/288 (11%)
 Frame = -1

Query: 765 KENSTTISPVSASQFKNDTVNHSMEFQLDTKVLQFQNLKLVQKLEAQNVECIALENKFNQ 586
           K   +++SP  A+  K   +  S + +LD  VLQ+QN KL QKLE Q +E  ALENKF+Q
Sbjct: 10  KRRFSSLSPTPATAKKLPFLPVSEDKKLDIAVLQYQNQKLTQKLETQKLEYAALENKFSQ 69

Query: 585 LRDKQLPYDNTLEVVHKTWEQVVEDLETSSKRVKHCNGICVDSITKSNEGD--------- 433
           L++KQ  YD+TL VV K+WEQ+V DLE+ S+ ++  +         S +G          
Sbjct: 70  LKEKQQSYDSTLAVVKKSWEQLVNDLESCSEHIRESSSKVDSRFASSTDGTLFASEFICQ 129

Query: 432 ---------------GGSSLRGDEFFRRLIETGATESS-------QVDEDRQILGERAKN 319
                          G SS   D F  RL++TGATESS       + ++ R+I  E+AK+
Sbjct: 130 NYFTEISVLGVDYPYGSSSTVQDVFLSRLLQTGATESSSSYHFANETEQHREITAEKAKS 189

Query: 318 ILSNVIDGIDSLWCLKGGLYAAA--QLPDDGPCSQH-TNDLEIEVERLRLQISDLHLKHR 148
           IL+N++  I++  CLK G +     +L  D  C Q  +NDLE+E + LRL +S+LHLKH+
Sbjct: 190 ILNNIVTSINNFQCLKDGFHTVLLKKLRGDVSCGQMLSNDLEVESKNLRLALSELHLKHK 249

Query: 147 TLSRELQSHRDTDAKNKADLKHLRGELESTTAELDESNRRLETLKSER 4
           +L+ + ++HRD DAKNKA+LK L+GELEST AEL+ESN++L TLK E+
Sbjct: 250 SLASDFRTHRDLDAKNKAELKRLKGELESTVAELEESNQKLATLKVEK 297


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