BLASTX nr result

ID: Bupleurum21_contig00010737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010737
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305661.1| predicted protein [Populus trichocarpa] gi|1...   196   2e-48
ref|XP_002273704.1| PREDICTED: vacuolar protein sorting-associat...   192   2e-47
ref|XP_002521434.1| Vacuolar protein sorting-associated protein ...   191   5e-47
ref|XP_002316653.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
gb|ADB85104.1| vacuolar protein sorting-associated protein VPS28...   189   2e-46

>ref|XP_002305661.1| predicted protein [Populus trichocarpa] gi|118483725|gb|ABK93756.1|
           unknown [Populus trichocarpa]
           gi|222848625|gb|EEE86172.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  196 bits (498), Expect = 2e-48
 Identities = 96/110 (87%), Positives = 107/110 (97%)
 Frame = +1

Query: 37  MDVKLWNDKQEREMYENFAELFAIIKATEKLEKAYVRDIISSSEYEIECQKLIAHFKTLS 216
           M+VKLWNDK+EREMYENFAEL+AIIKATEKLEKAYVRDIISSSEYE+ECQKLIAHFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYEMECQKLIAHFKTLA 60

Query: 217 STLKYTIPSIEKFHETYKMDCPAAINRLVTSGVPATVEHRAAAAMSNTAS 366
           S+LK T+PSIE+F +TYKMDCPAAINRLVTSGVPATVEHRAAAA+S+T S
Sbjct: 61  SSLKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAVSSTTS 110


>ref|XP_002273704.1| PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2
           isoform 3 [Vitis vinifera]
           gi|225470410|ref|XP_002273673.1| PREDICTED: vacuolar
           protein sorting-associated protein 28 homolog 2 isoform
           2 [Vitis vinifera] gi|225470412|ref|XP_002273612.1|
           PREDICTED: vacuolar protein sorting-associated protein
           28 homolog 2 isoform 1 [Vitis vinifera]
           gi|147776671|emb|CAN74473.1| hypothetical protein
           VITISV_001093 [Vitis vinifera]
           gi|302144239|emb|CBI23477.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  192 bits (488), Expect = 2e-47
 Identities = 96/110 (87%), Positives = 104/110 (94%)
 Frame = +1

Query: 37  MDVKLWNDKQEREMYENFAELFAIIKATEKLEKAYVRDIISSSEYEIECQKLIAHFKTLS 216
           M+VKLWNDK+EREMYENFAEL+AIIKATEKLEKAYVRDIISS+EYE ECQKLIAHFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSAEYEPECQKLIAHFKTLA 60

Query: 217 STLKYTIPSIEKFHETYKMDCPAAINRLVTSGVPATVEHRAAAAMSNTAS 366
           STLK TIPSIE+F +TYKMDCPAAINRLVTSGVPATVEHR+AAA S T S
Sbjct: 61  STLKDTIPSIERFADTYKMDCPAAINRLVTSGVPATVEHRSAAAASATTS 110


>ref|XP_002521434.1| Vacuolar protein sorting-associated protein VPS28, putative
           [Ricinus communis] gi|223539333|gb|EEF40924.1| Vacuolar
           protein sorting-associated protein VPS28, putative
           [Ricinus communis]
          Length = 209

 Score =  191 bits (485), Expect = 5e-47
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +1

Query: 37  MDVKLWNDKQEREMYENFAELFAIIKATEKLEKAYVRDIISSSEYEIECQKLIAHFKTLS 216
           M+VKLWNDK+EREMYENFAEL+AIIKATEKLEKAY+RDIISSS+YE ECQKLIAHFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDIISSSDYETECQKLIAHFKTLA 60

Query: 217 STLKYTIPSIEKFHETYKMDCPAAINRLVTSGVPATVEHRAAAAMSNTAS 366
           STLK  +PSIE+F +TYKMDCPAAINRLVTSGVPATVEHRAAAA S T S
Sbjct: 61  STLKDIVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAASSATTS 110


>ref|XP_002316653.1| predicted protein [Populus trichocarpa] gi|222859718|gb|EEE97265.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  191 bits (484), Expect = 7e-47
 Identities = 93/110 (84%), Positives = 103/110 (93%)
 Frame = +1

Query: 37  MDVKLWNDKQEREMYENFAELFAIIKATEKLEKAYVRDIISSSEYEIECQKLIAHFKTLS 216
           M+VKLWNDK+EREMY+NFAEL+AIIKATEKLEK YVRDIISSS+YE ECQKLIAHFKTL+
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKGYVRDIISSSQYETECQKLIAHFKTLA 60

Query: 217 STLKYTIPSIEKFHETYKMDCPAAINRLVTSGVPATVEHRAAAAMSNTAS 366
           ST K T+PSIE+F +TYKMDCPAAINRLVTSGVPATVEHRAAAA S+T S
Sbjct: 61  STFKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAASSTTS 110


>gb|ADB85104.1| vacuolar protein sorting-associated protein VPS28 [Jatropha curcas]
          Length = 209

 Score =  189 bits (480), Expect = 2e-46
 Identities = 93/110 (84%), Positives = 102/110 (92%)
 Frame = +1

Query: 37  MDVKLWNDKQEREMYENFAELFAIIKATEKLEKAYVRDIISSSEYEIECQKLIAHFKTLS 216
           M+VKLWNDK+EREMYENFAEL+AIIKATEKLEKAY+RDII+SSEYE EC KLIAHFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDIITSSEYETECHKLIAHFKTLA 60

Query: 217 STLKYTIPSIEKFHETYKMDCPAAINRLVTSGVPATVEHRAAAAMSNTAS 366
           STLK  +PSIE+F +TYKMDCPAAINRLVTSGVPATVEHRAAAA S T S
Sbjct: 61  STLKDIVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAASATTS 110


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