BLASTX nr result
ID: Bupleurum21_contig00010734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00010734
(615 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003526788.1| PREDICTED: probable alanyl-tRNA synthetase, ... 119 5e-39
ref|XP_003523490.1| PREDICTED: probable alanyl-tRNA synthetase, ... 119 6e-39
ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus co... 118 3e-38
ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, ... 115 1e-36
ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, ch... 112 3e-36
>ref|XP_003526788.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
[Glycine max]
Length = 980
Score = 119 bits (297), Expect(2) = 5e-39
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -1
Query: 615 VPDNYETDLNFPIMEKALKMANVSYALTDDPTKTKLKIIGDHLRAIVYLMSDGVIPSNIG 436
VP+NYETDL FPI+EKA K+ANVSY + DD TK LKIIGDH+RAIV+L+SDGV+PSN+G
Sbjct: 313 VPNNYETDLIFPIIEKASKLANVSYGIADDQTKRNLKIIGDHMRAIVFLISDGVVPSNVG 372
Query: 435 KGYLVRWLIRRVVRT 391
+GY+VR LIRRVVRT
Sbjct: 373 RGYVVRRLIRRVVRT 387
Score = 68.2 bits (165), Expect(2) = 5e-39
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 388 DGVGNLDGAMLPILAEKVIDLSSHIDIDVKTRATHIFEELKGEELWFILT 239
DG G+L+GA LP++AEKV++LS+HID DVK +A IFEELK EEL F+ T
Sbjct: 396 DGRGDLEGAFLPMIAEKVVELSTHIDADVKNKAPRIFEELKREELRFVQT 445
Score = 62.0 bits (149), Expect(2) = 4e-15
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -1
Query: 174 GGGRPNFAQAGGRKPENLLSALEKARTDILALLSEK 67
GGGRPNFAQAGGRKPENL SAL+KAR++++A L EK
Sbjct: 943 GGGRPNFAQAGGRKPENLASALDKARSELIATLCEK 978
Score = 44.7 bits (104), Expect(2) = 4e-15
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 241 TPGTVDLGLQAGKFIGPIARLCGG 170
TPG VD G+QAGKFIG IA+LCGG
Sbjct: 918 TPGVVDQGIQAGKFIGQIAKLCGG 941
>ref|XP_003523490.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
[Glycine max]
Length = 957
Score = 119 bits (297), Expect(2) = 6e-39
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -1
Query: 615 VPDNYETDLNFPIMEKALKMANVSYALTDDPTKTKLKIIGDHLRAIVYLMSDGVIPSNIG 436
VP+NYETDL FPI+EKA K+ANVSY + DD TK LKIIGDH+RAIV+L+SDGV+PSN+G
Sbjct: 290 VPNNYETDLIFPIIEKASKLANVSYGIADDQTKRNLKIIGDHMRAIVFLISDGVVPSNVG 349
Query: 435 KGYLVRWLIRRVVRT 391
+GY+VR LIRRVVRT
Sbjct: 350 RGYVVRRLIRRVVRT 364
Score = 67.8 bits (164), Expect(2) = 6e-39
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 388 DGVGNLDGAMLPILAEKVIDLSSHIDIDVKTRATHIFEELKGEELWFILT 239
DG G+L+GA LPI+AEKV++LS+HID DV +A+ IFEELK EEL F+ T
Sbjct: 373 DGRGDLEGAFLPIIAEKVVELSTHIDADVMNKASRIFEELKREELRFVQT 422
Score = 62.0 bits (149), Expect(2) = 4e-15
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -1
Query: 174 GGGRPNFAQAGGRKPENLLSALEKARTDILALLSEK 67
GGGRPNFAQAGGRKPENL SAL+KAR++++A L EK
Sbjct: 920 GGGRPNFAQAGGRKPENLASALDKARSELIATLCEK 955
Score = 44.7 bits (104), Expect(2) = 4e-15
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 241 TPGTVDLGLQAGKFIGPIARLCGG 170
TPG VD G+QAGKFIG IA+LCGG
Sbjct: 895 TPGVVDQGIQAGKFIGQIAKLCGG 918
>ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus communis]
gi|223525858|gb|EEF28289.1| alanyl-tRNA synthetase,
putative [Ricinus communis]
Length = 815
Score = 118 bits (296), Expect(2) = 3e-38
Identities = 56/75 (74%), Positives = 69/75 (92%)
Frame = -1
Query: 615 VPDNYETDLNFPIMEKALKMANVSYALTDDPTKTKLKIIGDHLRAIVYLMSDGVIPSNIG 436
VP+NYETDL +PI+EK ++AN+SY++ DD TKTKLKIIGDHLRAIV+L+SDGV+PSNIG
Sbjct: 148 VPNNYETDLIYPIIEKVSELANLSYSVADDQTKTKLKIIGDHLRAIVFLISDGVLPSNIG 207
Query: 435 KGYLVRWLIRRVVRT 391
+GY+VR LIRRVVRT
Sbjct: 208 RGYVVRRLIRRVVRT 222
Score = 65.9 bits (159), Expect(2) = 3e-38
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = -3
Query: 388 DGVGNLDGAMLPILAEKVIDLSSHIDIDVKTRATHIFEELKGEELWFILT 239
DG GNLDGA +P +AEKVI+LS HID DVK RA+ I EEL+ EE F+ T
Sbjct: 231 DGKGNLDGAFIPAIAEKVIELSVHIDSDVKARASRILEELQREEFRFVQT 280
Score = 60.5 bits (145), Expect(2) = 1e-15
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -1
Query: 174 GGGRPNFAQAGGRKPENLLSALEKARTDILALLSEK 67
GGGRPNFAQAGGRKP NL SALEKA D+L++L+EK
Sbjct: 778 GGGRPNFAQAGGRKPGNLPSALEKAHADLLSILTEK 813
Score = 47.8 bits (112), Expect(2) = 1e-15
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -3
Query: 241 TPGTVDLGLQAGKFIGPIARLCGG 170
TPG V+LG+QAGKFIGPIA+LCGG
Sbjct: 753 TPGVVNLGVQAGKFIGPIAKLCGG 776
>ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
vinifera] gi|297744517|emb|CBI37779.3| unnamed protein
product [Vitis vinifera]
Length = 1006
Score = 115 bits (288), Expect(2) = 1e-36
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = -1
Query: 615 VPDNYETDLNFPIMEKALKMANVSYALTDDPTKTKLKIIGDHLRAIVYLMSDGVIPSNIG 436
VP+NYETDL +PI+EKA ++ANVSYAL DD K LK+IGDHLRAIVYL+SDGV+PSNIG
Sbjct: 339 VPNNYETDLIYPIIEKASELANVSYALADDHAKMNLKVIGDHLRAIVYLISDGVVPSNIG 398
Query: 435 KGYLVRWLIRRVVRT 391
+GY+ R LIRR VRT
Sbjct: 399 RGYVARRLIRRAVRT 413
Score = 63.5 bits (153), Expect(2) = 1e-36
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -3
Query: 388 DGVGNLDGAMLPILAEKVIDLSSHIDIDVKTRATHIFEELKGEELWFILT 239
DG GN +GA LP +AEKVI+LSS ID DVK+RA I EELK EEL F+ T
Sbjct: 422 DGRGNPEGAFLPTIAEKVIELSSQIDPDVKSRAPRILEELKREELRFVQT 471
Score = 63.2 bits (152), Expect(2) = 3e-17
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = -1
Query: 174 GGGRPNFAQAGGRKPENLLSALEKARTDILALLSEK 67
GGGRPNFAQAGGRKPENL ALEKAR +++A+LSEK
Sbjct: 969 GGGRPNFAQAGGRKPENLSGALEKAREELVAILSEK 1004
Score = 50.8 bits (120), Expect(2) = 3e-17
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = -3
Query: 391 LDGVGNLDGAMLPILAEKVIDLSSHIDIDVKTRATHIFEELKGEE---LWFILTPGTVDL 221
++ + ++D L AE +ID ++ A I EE L TPG VDL
Sbjct: 898 VESMDDIDADSLKSAAEYLIDT-------LQDPAAVILGSCPSEEKVSLVAAFTPGVVDL 950
Query: 220 GLQAGKFIGPIARLCGG 170
G+QAGKFIGPIA+LCGG
Sbjct: 951 GIQAGKFIGPIAKLCGG 967
>ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like
[Cucumis sativus]
Length = 956
Score = 112 bits (280), Expect(2) = 3e-36
Identities = 52/75 (69%), Positives = 67/75 (89%)
Frame = -1
Query: 615 VPDNYETDLNFPIMEKALKMANVSYALTDDPTKTKLKIIGDHLRAIVYLMSDGVIPSNIG 436
VP+NYETDL +PI++KA ++ANV+Y D+ +KT LKIIGDH+RA+VYL+SDGV+PSNIG
Sbjct: 289 VPNNYETDLIYPIIQKASELANVTYDTADNRSKTNLKIIGDHMRAVVYLISDGVVPSNIG 348
Query: 435 KGYLVRWLIRRVVRT 391
+GY+VR LIRRVVRT
Sbjct: 349 RGYIVRRLIRRVVRT 363
Score = 65.5 bits (158), Expect(2) = 3e-36
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -3
Query: 388 DGVGNLDGAMLPILAEKVIDLSSHIDIDVKTRATHIFEELKGEELWFILT 239
DG GN+DGA P++AEKVI LS+HID DVK RA I EELK EEL F+ T
Sbjct: 372 DGRGNIDGAFTPVIAEKVIALSNHIDEDVKGRAGRILEELKREELRFVQT 421
Score = 61.6 bits (148), Expect(2) = 7e-15
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -1
Query: 174 GGGRPNFAQAGGRKPENLLSALEKARTDILALLSEK 67
GGGRPNFAQAGGRKPENLL ALE AR+++ +LSEK
Sbjct: 919 GGGRPNFAQAGGRKPENLLDALENARSELTRILSEK 954
Score = 44.3 bits (103), Expect(2) = 7e-15
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 241 TPGTVDLGLQAGKFIGPIARLCGG 170
TP VDLG+QAGKFIG IA+LCGG
Sbjct: 894 TPSVVDLGVQAGKFIGSIAKLCGG 917