BLASTX nr result

ID: Bupleurum21_contig00010727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010727
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548239.1| PREDICTED: CDGSH iron-sulfur domain-containi...   132   3e-29
ref|NP_001235168.1| uncharacterized protein LOC100306446 [Glycin...   130   2e-28
emb|CBI24493.3| unnamed protein product [Vitis vinifera]              129   5e-28
ref|XP_002269624.1| PREDICTED: CDGSH iron-sulfur domain-containi...   129   5e-28
ref|XP_002321854.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27

>ref|XP_003548239.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like
           [Glycine max]
          Length = 113

 Score =  132 bits (333), Expect = 3e-29
 Identities = 64/78 (82%), Positives = 70/78 (89%), Gaps = 2/78 (2%)
 Frame = -1

Query: 436 GGKFNRTVRVRAE--SINPEIRKSEEKVVDSVDLTQLSKPITPYCRCWRSKTFPLCDGSH 263
           GG+  R V V+AE  SINP+IRKSEEKVVDSV +T+LSKP+TPYCRCWRS TFPLCDGSH
Sbjct: 36  GGRPRRVVLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSH 95

Query: 262 VKHNKATGDNVGPLLLKK 209
           VKHNKATGDNVGPLLLKK
Sbjct: 96  VKHNKATGDNVGPLLLKK 113


>ref|NP_001235168.1| uncharacterized protein LOC100306446 [Glycine max]
           gi|255628565|gb|ACU14627.1| unknown [Glycine max]
          Length = 113

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
 Frame = -1

Query: 442 GSGG-KFNRTVRVRAE--SINPEIRKSEEKVVDSVDLTQLSKPITPYCRCWRSKTFPLCD 272
           G GG +  R V V+AE  SINP+IRKSEEKVVDSV +T+LSKP+TPYCRCWRS TFPLCD
Sbjct: 33  GVGGVRTRRVVLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCD 92

Query: 271 GSHVKHNKATGDNVGPLLLKK 209
           GSHVKHNKATGDNVGPLLLKK
Sbjct: 93  GSHVKHNKATGDNVGPLLLKK 113


>emb|CBI24493.3| unnamed protein product [Vitis vinifera]
          Length = 97

 Score =  129 bits (323), Expect = 5e-28
 Identities = 61/77 (79%), Positives = 66/77 (85%)
 Frame = -1

Query: 439 SGGKFNRTVRVRAESINPEIRKSEEKVVDSVDLTQLSKPITPYCRCWRSKTFPLCDGSHV 260
           S G   R V VRAE+INPEIRK EEKVVDSV + +L+KP+T YCRCWRS TFPLCDGSHV
Sbjct: 21  SSGAARRAVVVRAETINPEIRKIEEKVVDSVLVAELAKPVTAYCRCWRSGTFPLCDGSHV 80

Query: 259 KHNKATGDNVGPLLLKK 209
           KHNKATGDNVGPLLLKK
Sbjct: 81  KHNKATGDNVGPLLLKK 97


>ref|XP_002269624.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like
           [Vitis vinifera]
          Length = 117

 Score =  129 bits (323), Expect = 5e-28
 Identities = 61/77 (79%), Positives = 66/77 (85%)
 Frame = -1

Query: 439 SGGKFNRTVRVRAESINPEIRKSEEKVVDSVDLTQLSKPITPYCRCWRSKTFPLCDGSHV 260
           S G   R V VRAE+INPEIRK EEKVVDSV + +L+KP+T YCRCWRS TFPLCDGSHV
Sbjct: 41  SSGAARRAVVVRAETINPEIRKIEEKVVDSVLVAELAKPVTAYCRCWRSGTFPLCDGSHV 100

Query: 259 KHNKATGDNVGPLLLKK 209
           KHNKATGDNVGPLLLKK
Sbjct: 101 KHNKATGDNVGPLLLKK 117


>ref|XP_002321854.1| predicted protein [Populus trichocarpa] gi|222868850|gb|EEF05981.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  127 bits (318), Expect = 2e-27
 Identities = 58/70 (82%), Positives = 64/70 (91%)
 Frame = -1

Query: 415 VRVRAESINPEIRKSEEKVVDSVDLTQLSKPITPYCRCWRSKTFPLCDGSHVKHNKATGD 236
           VR  A+SINPEIRK+EEKVVDSV + +LSKP+T YCRCWRS TFPLCDGSHVKHNKATGD
Sbjct: 97  VRAEAQSINPEIRKNEEKVVDSVVVAELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGD 156

Query: 235 NVGPLLLKKE 206
           NVGPLLLKK+
Sbjct: 157 NVGPLLLKKQ 166


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