BLASTX nr result

ID: Bupleurum21_contig00010712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010712
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234771.1| ACI19 protein [Solanum lycopersicum] gi|6844...    89   4e-16
ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_003537504.1| PREDICTED: uncharacterized protein LOC100815...    83   2e-14
ref|XP_004154903.1| PREDICTED: uncharacterized protein LOC101230...    83   3e-14

>ref|NP_001234771.1| ACI19 protein [Solanum lycopersicum] gi|68449768|gb|AAY97871.1|
           ACI19 [Solanum lycopersicum]
          Length = 220

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/66 (63%), Positives = 56/66 (84%)
 Frame = +1

Query: 1   KVAQIEMVKSKIRKIGKSCVSYEEFVEICVAGAWSSDQGLEIAKMLDESGTVLVLGKVVF 180
           KV+Q+EMVK ++++  K+CVSY EFV+IC   + S+D G+E+AK+LD+SGTVLVLG VVF
Sbjct: 133 KVSQLEMVKLRLKQTEKNCVSYPEFVQICSGISSSNDSGIELAKILDDSGTVLVLGNVVF 192

Query: 181 LRPDQV 198
           LRPDQV
Sbjct: 193 LRPDQV 198


>ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 361

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = +1

Query: 1   KVAQIEMVKSKIRKIGKSCVSYEEFVEICVAGAWSSDQGLEIAKMLDESGTVLVLGKVVF 180
           +V ++EMVK  +R+I KS V Y EFV +C  G   SDQGLEIA+MLDESGTV+VLG VV+
Sbjct: 133 RVTRMEMVKRDLREIQKSWVPYSEFVRVCCQGCDDSDQGLEIAQMLDESGTVIVLGNVVY 192

Query: 181 LRPDQV 198
           LRP+QV
Sbjct: 193 LRPEQV 198


>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
            [Cucumis sativus]
          Length = 1058

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = +1

Query: 1    KVAQIEMVKSKIRKIGKSCVSYEEFVEICVAGAWSSDQGLEIAKMLDESGTVLVLGKVVF 180
            +V ++EMVK  +R+I KS V Y EFV +C  G   SDQGLEIA+MLDESGTV+VLG VV+
Sbjct: 829  RVTRMEMVKRDLREIQKSWVPYSEFVRVCCQGCDDSDQGLEIAQMLDESGTVIVLGNVVY 888

Query: 181  LRPDQV 198
            LRP+QV
Sbjct: 889  LRPEQV 894


>ref|XP_003537504.1| PREDICTED: uncharacterized protein LOC100815180 [Glycine max]
          Length = 324

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/66 (57%), Positives = 51/66 (77%)
 Frame = +1

Query: 1   KVAQIEMVKSKIRKIGKSCVSYEEFVEICVAGAWSSDQGLEIAKMLDESGTVLVLGKVVF 180
           KVAQ+EM+K+K+R+  KSC+++ EF+ IC       DQ +EIAKMLD+S  V+VLG VVF
Sbjct: 102 KVAQVEMLKAKLRQTRKSCITFSEFIAICAEHCSDQDQAVEIAKMLDDSAAVIVLGDVVF 161

Query: 181 LRPDQV 198
           LRP+QV
Sbjct: 162 LRPEQV 167


>ref|XP_004154903.1| PREDICTED: uncharacterized protein LOC101230560 [Cucumis sativus]
          Length = 341

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/67 (53%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   KVAQIEMVKSKIRKIGKSCVSYEEFVEICVAGAWSS-DQGLEIAKMLDESGTVLVLGKVV 177
           +++Q+E +K+K+R +GKSC+SY E+  IC     ++ +QG E AK+LDESG+V+VLG +V
Sbjct: 119 RLSQVEKIKNKLRNVGKSCISYSEYTRICAEDCGNNLEQGAEFAKLLDESGSVIVLGNIV 178

Query: 178 FLRPDQV 198
           FLRPDQV
Sbjct: 179 FLRPDQV 185


Top