BLASTX nr result

ID: Bupleurum21_contig00010702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010702
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like iso...   320   3e-85
emb|CBI37994.3| unnamed protein product [Vitis vinifera]              320   3e-85
ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like iso...   320   3e-85
ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [C...   319   9e-85
gb|ADD09601.1| zinc knuckle (ccHc-type) family protein [Trifoliu...   317   2e-84

>ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like isoform 2 [Vitis vinifera]
          Length = 246

 Score =  320 bits (821), Expect = 3e-85
 Identities = 134/177 (75%), Positives = 149/177 (84%)
 Frame = -2

Query: 531 PMDRKIRTEXXXXXXXXXXXXXXXSFSQSNLCKNCKRPGHFARECSNVAICHNCGLPGHI 352
           P DRKIRT+                FSQ NLCKNCKRPGH+AREC NVA+CHNC LPGHI
Sbjct: 12  PQDRKIRTDRLSYRNAPYRRDSRRGFSQGNLCKNCKRPGHYARECPNVAVCHNCSLPGHI 71

Query: 351 ASECSTKSLCWNCREPGHMAGNCPNEGICHTCGKTGHRARDCSAPQLPPGDLRLCNNCYK 172
           ASEC+T+SLCWNC+EPGH A NCPNEGICHTCGKTGH ARDCSAP +PPGDLRLCNNCYK
Sbjct: 72  ASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYK 131

Query: 171 QGHVAVDCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARDCPKASMIDERGG 1
           QGH+A DCTNDKAC NCRKTGHLARDC+NDPVCN+CN+SGHVAR CPKA+++ +RGG
Sbjct: 132 QGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPKANVLGDRGG 188


>emb|CBI37994.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  320 bits (821), Expect = 3e-85
 Identities = 134/177 (75%), Positives = 149/177 (84%)
 Frame = -2

Query: 531 PMDRKIRTEXXXXXXXXXXXXXXXSFSQSNLCKNCKRPGHFARECSNVAICHNCGLPGHI 352
           P DRKIRT+                FSQ NLCKNCKRPGH+AREC NVA+CHNC LPGHI
Sbjct: 12  PQDRKIRTDRLSYRNAPYRRDSRRGFSQGNLCKNCKRPGHYARECPNVAVCHNCSLPGHI 71

Query: 351 ASECSTKSLCWNCREPGHMAGNCPNEGICHTCGKTGHRARDCSAPQLPPGDLRLCNNCYK 172
           ASEC+T+SLCWNC+EPGH A NCPNEGICHTCGKTGH ARDCSAP +PPGDLRLCNNCYK
Sbjct: 72  ASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYK 131

Query: 171 QGHVAVDCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARDCPKASMIDERGG 1
           QGH+A DCTNDKAC NCRKTGHLARDC+NDPVCN+CN+SGHVAR CPKA+++ +RGG
Sbjct: 132 QGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPKANVLGDRGG 188


>ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
          Length = 258

 Score =  320 bits (821), Expect = 3e-85
 Identities = 134/177 (75%), Positives = 149/177 (84%)
 Frame = -2

Query: 531 PMDRKIRTEXXXXXXXXXXXXXXXSFSQSNLCKNCKRPGHFARECSNVAICHNCGLPGHI 352
           P DRKIRT+                FSQ NLCKNCKRPGH+AREC NVA+CHNC LPGHI
Sbjct: 24  PQDRKIRTDRLSYRNAPYRRDSRRGFSQGNLCKNCKRPGHYARECPNVAVCHNCSLPGHI 83

Query: 351 ASECSTKSLCWNCREPGHMAGNCPNEGICHTCGKTGHRARDCSAPQLPPGDLRLCNNCYK 172
           ASEC+T+SLCWNC+EPGH A NCPNEGICHTCGKTGH ARDCSAP +PPGDLRLCNNCYK
Sbjct: 84  ASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYK 143

Query: 171 QGHVAVDCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARDCPKASMIDERGG 1
           QGH+A DCTNDKAC NCRKTGHLARDC+NDPVCN+CN+SGHVAR CPKA+++ +RGG
Sbjct: 144 QGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPKANVLGDRGG 200


>ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
           gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding
           protein HEXBP-like [Cucumis sativus]
          Length = 260

 Score =  319 bits (817), Expect = 9e-85
 Identities = 132/176 (75%), Positives = 150/176 (85%)
 Frame = -2

Query: 531 PMDRKIRTEXXXXXXXXXXXXXXXSFSQSNLCKNCKRPGHFARECSNVAICHNCGLPGHI 352
           P+DRKIR++                FS+ NLCKNCKRPGHFAREC NVAICHNCGLPGHI
Sbjct: 16  PLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHI 75

Query: 351 ASECSTKSLCWNCREPGHMAGNCPNEGICHTCGKTGHRARDCSAPQLPPGDLRLCNNCYK 172
           ASEC+TKSLCWNCREPGHMA +CPNEGICHTCGK GHRARDC+AP +PPGDLRLCNNCYK
Sbjct: 76  ASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAPPMPPGDLRLCNNCYK 135

Query: 171 QGHVAVDCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARDCPKASMIDERG 4
           QGH+A DCTN+KAC NCRKTGHLARDC NDP+CN+CN+SGHVAR CPK++++ +RG
Sbjct: 136 QGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRG 191



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
 Frame = -2

Query: 441 LCKNCKRPGHFARECSNVAICHNCGLPGHIASECSTKSLCWNCREPGHMAGNCPNEGICH 262
           LC NC + GH A +C+N   C+NC   GH+A +C    +C  C   GH+A  CP   +  
Sbjct: 129 LCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG 188

Query: 261 TCGKTGHRARDCSAPQLPPG--DLRLCNNCYKQGHVAVDCTND-KACKNCRKTGHLARDC 91
             G  G  +   S      G  D+ +C NC + GH++ DC      C NC   GHLA +C
Sbjct: 189 DRGDRGISSGGGSGRGSGSGYRDV-VCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC 247


>gb|ADD09601.1| zinc knuckle (ccHc-type) family protein [Trifolium repens]
          Length = 274

 Score =  317 bits (813), Expect = 2e-84
 Identities = 130/177 (73%), Positives = 149/177 (84%)
 Frame = -2

Query: 531 PMDRKIRTEXXXXXXXXXXXXXXXSFSQSNLCKNCKRPGHFARECSNVAICHNCGLPGHI 352
           PMDR+ R+E                FSQ NLCKNCKRPGH+AREC N+A+CHNC LPGHI
Sbjct: 20  PMDRRFRSERFSHRDAPYRRDSRRGFSQDNLCKNCKRPGHYARECPNIAVCHNCSLPGHI 79

Query: 351 ASECSTKSLCWNCREPGHMAGNCPNEGICHTCGKTGHRARDCSAPQLPPGDLRLCNNCYK 172
           ASECSTKSLCWNC+EPGHMA  CPNEGICHTCGKTGHRAR+C+ PQ+PPGDLRLCNNCYK
Sbjct: 80  ASECSTKSLCWNCKEPGHMASTCPNEGICHTCGKTGHRARECTTPQMPPGDLRLCNNCYK 139

Query: 171 QGHVAVDCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARDCPKASMIDERGG 1
           QGH+AV+CTN+KAC NCRKTGHLARDC NDP+CN+CN+SGHVAR CPK+++I +R G
Sbjct: 140 QGHIAVECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVIGDRSG 196


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