BLASTX nr result

ID: Bupleurum21_contig00010653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010653
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]   214   6e-54
ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, p...   210   1e-52
ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltran...   209   2e-52
emb|CBI39768.3| unnamed protein product [Vitis vinifera]              204   5e-51
ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltran...   201   5e-50

>emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]
          Length = 741

 Score =  214 bits (545), Expect = 6e-54
 Identities = 110/172 (63%), Positives = 129/172 (75%), Gaps = 7/172 (4%)
 Frame = -1

Query: 496 LQKELILAAIDMVDANSKSGGYLVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDWGRP 317
           LQK+LILAAIDMVDANSKSGGY+VYSTCSIM+ ENEAVIDYALKKR+VKLVPCGLD+GRP
Sbjct: 422 LQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFGRP 481

Query: 316 GFIRYREQRFHTSLEKTRRFYPHVHNMDGFFVAKLQKMSNTKPAPTTLKPSDDVAEVIEP 137
           GF R+RE RFH SLEKTRRFYPHVHNMDGFFVAKL+KMSN+KP PT  +PS+   +  E 
Sbjct: 482 GFTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAPEE 541

Query: 136 NALEKKFE--DKVVHHKKHSSTDREKG-----VSKQGKEEKTFSGKKRKERK 2
           N  + +    +K   H     T +E G       + GK+E   +  KRK+RK
Sbjct: 542 NDSDSELNMGEKTQQHPGKRGTKKENGGLKNAAPENGKKESPSTTTKRKKRK 593


>ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, putative [Ricinus
           communis] gi|223538025|gb|EEF39638.1| Proliferating-cell
           nucleolar antigen p120, putative [Ricinus communis]
          Length = 624

 Score =  210 bits (534), Expect = 1e-52
 Identities = 109/175 (62%), Positives = 126/175 (72%), Gaps = 10/175 (5%)
 Frame = -1

Query: 496 LQKELILAAIDMVDANSKSGGYLVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDWGRP 317
           LQK+LILAAIDMVDANSKSGGY+VYSTCS+MVAENEAVIDYALKKRDVKLVPCGLD+GRP
Sbjct: 417 LQKQLILAAIDMVDANSKSGGYIVYSTCSMMVAENEAVIDYALKKRDVKLVPCGLDFGRP 476

Query: 316 GFIRYREQRFHTSLEKTRRFYPHVHNMDGFFVAKLQKMSNTKPAPTTLKPSDDVAEVIEP 137
           GFIR+RE RFH SLEKTRRFYPHVHNMDGFFVAKL+KMSN+ P   + +P + V +  E 
Sbjct: 477 GFIRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNSIPTAESSEPLESVEQASES 536

Query: 136 N----------ALEKKFEDKVVHHKKHSSTDREKGVSKQGKEEKTFSGKKRKERK 2
           N           L+KK   K+    +        GVS  G  +   + K  K+RK
Sbjct: 537 NESKSEKNTAEPLKKKSVVKIEKGAREKGKGLSNGVSDNGNVKSATAAKNTKKRK 591


>ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Vitis vinifera]
          Length = 633

 Score =  209 bits (532), Expect = 2e-52
 Identities = 110/186 (59%), Positives = 130/186 (69%), Gaps = 21/186 (11%)
 Frame = -1

Query: 496 LQKELILAAIDMVDANSKSGGYLVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDWGRP 317
           LQK+LILAAIDMVDANSKSGGY+VYSTCSIM+ ENEAVIDYALKKR+VKLVPCGLD+GRP
Sbjct: 420 LQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFGRP 479

Query: 316 GFIRYREQRFHTSLEKTRRFYPHVHNMDGFFVAKLQKMSNTKPAPTTLKPSDDVAEVIEP 137
           GF R+RE RFH SLEKTRRFYPHVHNMDGFFVAKL+KMSN+KP PT  +PS+   +  E 
Sbjct: 480 GFTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAPEE 539

Query: 136 NALEKKF----------------EDKVVHHKKHSSTDREKG-----VSKQGKEEKTFSGK 20
           N  + +                 ++K   H     T +E G       + GK+E   +  
Sbjct: 540 NDSDSELNMGEKTQQHPGKRGTKKEKTQQHPGKRGTKKENGGLKNAAPENGKKESPSTTT 599

Query: 19  KRKERK 2
           KRK+RK
Sbjct: 600 KRKKRK 605


>emb|CBI39768.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  204 bits (520), Expect = 5e-51
 Identities = 102/148 (68%), Positives = 118/148 (79%), Gaps = 2/148 (1%)
 Frame = -1

Query: 496 LQKELILAAIDMVDANSKSGGYLVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDWGRP 317
           LQK+LILAAIDMVDANSKSGGY+VYSTCSIM+ ENEAVIDYALKKR+VKLVPCGLD+GRP
Sbjct: 61  LQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFGRP 120

Query: 316 GFIRYREQRFHTSLEKTRRFYPHVHNMDGFFVAKLQKMSNTKPAPTTLKPSDDVAEVIEP 137
           GF R+RE RFH SLEKTRRFYPHVHNMDGFFVAKL+KMSN+KP PT  +PS+   +  E 
Sbjct: 121 GFTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAPEE 180

Query: 136 NALEKKFE--DKVVHHKKHSSTDREKGV 59
           N  + +    +K  H +      R+ GV
Sbjct: 181 NDSDSELNMGEKTQHIRVKEGQKRKMGV 208


>ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Glycine max]
          Length = 610

 Score =  201 bits (511), Expect = 5e-50
 Identities = 109/178 (61%), Positives = 126/178 (70%), Gaps = 14/178 (7%)
 Frame = -1

Query: 496 LQKELILAAIDMVDANSKSGGYLVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDWGRP 317
           LQKELILAAIDMVDANSKSGGY+VYSTCSIMVAENEAVIDYALKKRDVKLVPCGLD+GRP
Sbjct: 401 LQKELILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRP 460

Query: 316 GFIRYREQRFHTSLEKTRRFYPHVHNMDGFFVAKLQKMSNTKP---APTTLKPSDDVAEV 146
           GF R+REQRFH SLEKTRRFYPHV NMDGFFVAKL+KMS++KP   +  T +  +D    
Sbjct: 461 GFTRFREQRFHPSLEKTRRFYPHVQNMDGFFVAKLKKMSSSKPGAKSSETAEKEEDTTTF 520

Query: 145 IEPNA-----------LEKKFEDKVVHHKKHSSTDREKGVSKQGKEEKTFSGKKRKER 5
           +E              +  + E K    +K  S     G+ ++GKE      KKR +R
Sbjct: 521 VEEKEKSSYGIKENGNVSSESESKNGKKRKFPSKP-SNGLKEKGKESSESEPKKRNKR 577


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