BLASTX nr result

ID: Bupleurum21_contig00010645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010645
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   216   2e-54
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   216   2e-54
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   216   2e-54
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   216   2e-54
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   213   1e-53

>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
            homolog 1-like [Cucumis sativus]
          Length = 1900

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)
 Frame = -3

Query: 425  VIINSEVWDLRKFRLLRSVPSLDQTVVTFNGSGDVIYATLRRNLDDVTSALHTRRVKHPL 246
            VIINSEVWDLRKFRLLRSVPSLDQT +TFN SGDVIYA LRRNL+DV SA+HTRRVKHPL
Sbjct: 1669 VIINSEVWDLRKFRLLRSVPSLDQTAITFNASGDVIYAILRRNLEDVMSAVHTRRVKHPL 1728

Query: 245  YSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSIVGLVTMDDPDEMYSSARVFEIGRRR 66
            ++AFRT+DAVNYSDIATIP+DRCVLDF TE TDS VGL+TMDD DEM+SSARV+EIGRRR
Sbjct: 1729 FAAFRTIDAVNYSDIATIPLDRCVLDFTTEKTDSFVGLITMDDQDEMFSSARVYEIGRRR 1788

Query: 65   PT 60
            PT
Sbjct: 1789 PT 1790


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
            sativus]
          Length = 1915

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)
 Frame = -3

Query: 425  VIINSEVWDLRKFRLLRSVPSLDQTVVTFNGSGDVIYATLRRNLDDVTSALHTRRVKHPL 246
            VIINSEVWDLRKFRLLRSVPSLDQT +TFN SGDVIYA LRRNL+DV SA+HTRRVKHPL
Sbjct: 1684 VIINSEVWDLRKFRLLRSVPSLDQTAITFNASGDVIYAILRRNLEDVMSAVHTRRVKHPL 1743

Query: 245  YSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSIVGLVTMDDPDEMYSSARVFEIGRRR 66
            ++AFRT+DAVNYSDIATIP+DRCVLDF TE TDS VGL+TMDD DEM+SSARV+EIGRRR
Sbjct: 1744 FAAFRTIDAVNYSDIATIPLDRCVLDFTTEKTDSFVGLITMDDQDEMFSSARVYEIGRRR 1803

Query: 65   PT 60
            PT
Sbjct: 1804 PT 1805


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/122 (84%), Positives = 114/122 (93%)
 Frame = -3

Query: 425  VIINSEVWDLRKFRLLRSVPSLDQTVVTFNGSGDVIYATLRRNLDDVTSALHTRRVKHPL 246
            VIINSEVWDLRKFRLLRSVPSLDQT +TFN  GDV+YA LRRNL+DV SA+HTRRVKHPL
Sbjct: 1636 VIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPL 1695

Query: 245  YSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSIVGLVTMDDPDEMYSSARVFEIGRRR 66
            ++AFRTVDA+NYSDIATIPVDRCVLDFA EPTDS VGL+TMDD DEMY+SAR++EIGRRR
Sbjct: 1696 FAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFVGLITMDDQDEMYASARIYEIGRRR 1755

Query: 65   PT 60
            PT
Sbjct: 1756 PT 1757


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/122 (84%), Positives = 114/122 (93%)
 Frame = -3

Query: 425  VIINSEVWDLRKFRLLRSVPSLDQTVVTFNGSGDVIYATLRRNLDDVTSALHTRRVKHPL 246
            VIINSEVWDLRKFRLLRSVPSLDQT +TFN  GDV+YA LRRNL+DV SA+HTRRVKHPL
Sbjct: 1625 VIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPL 1684

Query: 245  YSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSIVGLVTMDDPDEMYSSARVFEIGRRR 66
            ++AFRTVDA+NYSDIATIPVDRCVLDFA EPTDS VGL+TMDD DEMY+SAR++EIGRRR
Sbjct: 1685 FAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFVGLITMDDQDEMYASARIYEIGRRR 1744

Query: 65   PT 60
            PT
Sbjct: 1745 PT 1746


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
            gi|223532632|gb|EEF34418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1871

 Score =  213 bits (542), Expect = 1e-53
 Identities = 102/122 (83%), Positives = 113/122 (92%)
 Frame = -3

Query: 425  VIINSEVWDLRKFRLLRSVPSLDQTVVTFNGSGDVIYATLRRNLDDVTSALHTRRVKHPL 246
            VIINSEVWDLRKFRLLRSVPSLDQT +TFN  GDVIYA LRRNLDDV SA+HTRRVKHPL
Sbjct: 1634 VIINSEVWDLRKFRLLRSVPSLDQTAITFNARGDVIYAILRRNLDDVMSAVHTRRVKHPL 1693

Query: 245  YSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSIVGLVTMDDPDEMYSSARVFEIGRRR 66
            ++AF TVDA+NYS+IATIPVDRCVLDFA+E TDS VGL+TMDD +EMYSSAR++EIGRRR
Sbjct: 1694 FAAFHTVDAINYSEIATIPVDRCVLDFASEATDSFVGLITMDDQEEMYSSARIYEIGRRR 1753

Query: 65   PT 60
            PT
Sbjct: 1754 PT 1755


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