BLASTX nr result
ID: Bupleurum21_contig00010642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00010642
(1822 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|2... 86 6e-29
ref|XP_002876455.1| hypothetical protein ARALYDRAFT_486257 [Arab... 78 7e-25
ref|NP_191364.1| uncharacterized protein [Arabidopsis thaliana] ... 76 6e-24
ref|XP_002972034.1| hypothetical protein SELMODRAFT_96730 [Selag... 72 3e-23
ref|NP_181727.1| uncharacterized protein [Arabidopsis thaliana] ... 70 7e-22
>ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|222867368|gb|EEF04499.1|
predicted protein [Populus trichocarpa]
Length = 1180
Score = 86.3 bits (212), Expect(2) = 6e-29
Identities = 58/134 (43%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Frame = +2
Query: 1427 LDLSGLNACYITLRAWKKDGRCNELSVKAKGVFTSVLWLVMVMSQLLEGKALEGFLNMLK 1606
LDL GL+AC+ITLRAWK DGRC ELSVKA + V +L+ G +GF+ + +
Sbjct: 354 LDLGGLSACFITLRAWKFDGRCTELSVKAHALKGQQC----VHCRLVVG---DGFVTITR 406
Query: 1607 --RLRKKRQVDPEAIVSVXXXXXXXXXXXXXXXXVMPYHHLRGDDSMDKDGNDIDGECSC 1780
+R+ + EA DDS DKDGN++DGECS
Sbjct: 407 GESIRRFFEHAEEA------------------------EEEEDDDSTDKDGNELDGECSR 442
Query: 1781 PQKLAKSPELAREF 1822
PQK AKSPELAREF
Sbjct: 443 PQKHAKSPELAREF 456
Score = 69.7 bits (169), Expect(2) = 6e-29
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +3
Query: 1251 IQKETRCTSWFCVADTSFQYEVSHDTVQADWHKPF*TPLEHTTSFEWTVG 1400
+++E RCTSWFCVADT+FQYEVS D+VQADW + F + FEW VG
Sbjct: 280 MRREPRCTSWFCVADTAFQYEVSDDSVQADWRQTFSDTVVSYHHFEWAVG 329
>ref|XP_002876455.1| hypothetical protein ARALYDRAFT_486257 [Arabidopsis lyrata subsp.
lyrata] gi|297322293|gb|EFH52714.1| hypothetical protein
ARALYDRAFT_486257 [Arabidopsis lyrata subsp. lyrata]
Length = 1209
Score = 77.8 bits (190), Expect(2) = 7e-25
Identities = 55/132 (41%), Positives = 73/132 (55%)
Frame = +2
Query: 1427 LDLSGLNACYITLRAWKKDGRCNELSVKAKGVFTSVLWLVMVMSQLLEGKALEGFLNMLK 1606
L+L GLN+CYITLRA+K DGR +E+SVKA ++ V +L+ G +GF++ +K
Sbjct: 371 LNLRGLNSCYITLRAYKLDGRWSEVSVKAH----ALKGQNCVHGRLVVG---DGFVS-IK 422
Query: 1607 RLRKKRQVDPEAIVSVXXXXXXXXXXXXXXXXVMPYHHLRGDDSMDKDGNDIDGECSCPQ 1786
R R+ A + +D MDKDGN++DGECS PQ
Sbjct: 423 RGENIRRFFEHAEEA---------------------EEEEDEDMMDKDGNELDGECSRPQ 461
Query: 1787 KLAKSPELAREF 1822
K AKSPELAREF
Sbjct: 462 KHAKSPELAREF 473
Score = 64.3 bits (155), Expect(2) = 7e-25
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +3
Query: 1251 IQKETRCTSWFCVADTSFQYEVSHDTVQADWHKPF*TPLEHTTSFEWTVG 1400
+++E RCT+WFCVADT+FQYEVS D+V+ADW + F FEW +G
Sbjct: 297 MRREPRCTTWFCVADTAFQYEVSIDSVKADWRETFSENAGMYHHFEWAIG 346
>ref|NP_191364.1| uncharacterized protein [Arabidopsis thaliana]
gi|6729548|emb|CAB67633.1| putative protein [Arabidopsis
thaliana] gi|332646215|gb|AEE79736.1| uncharacterized
protein [Arabidopsis thaliana]
Length = 1209
Score = 76.3 bits (186), Expect(2) = 6e-24
Identities = 54/132 (40%), Positives = 72/132 (54%)
Frame = +2
Query: 1427 LDLSGLNACYITLRAWKKDGRCNELSVKAKGVFTSVLWLVMVMSQLLEGKALEGFLNMLK 1606
L+L GLN+CYITLRA+K DGR +E+S KA ++ V +L+ G +GF++ +K
Sbjct: 371 LNLRGLNSCYITLRAYKLDGRWSEVSAKAH----ALKGQNCVHGRLVVG---DGFVS-IK 422
Query: 1607 RLRKKRQVDPEAIVSVXXXXXXXXXXXXXXXXVMPYHHLRGDDSMDKDGNDIDGECSCPQ 1786
R R+ A + +D MDKDGN++DGECS PQ
Sbjct: 423 RGESIRRFFEHAEEA---------------------EEEEDEDMMDKDGNELDGECSRPQ 461
Query: 1787 KLAKSPELAREF 1822
K AKSPELAREF
Sbjct: 462 KHAKSPELAREF 473
Score = 62.8 bits (151), Expect(2) = 6e-24
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3
Query: 1251 IQKETRCTSWFCVADTSFQYEVSHDTVQADWHKPF*TPLEHTTSFEWTVG 1400
+++E RCT+WFCVA+T+FQYEVS D+V+ADW + F FEW +G
Sbjct: 297 MRREPRCTTWFCVANTTFQYEVSIDSVKADWRETFSENAGKYHHFEWAIG 346
>ref|XP_002972034.1| hypothetical protein SELMODRAFT_96730 [Selaginella moellendorffii]
gi|302781612|ref|XP_002972580.1| hypothetical protein
SELMODRAFT_52963 [Selaginella moellendorffii]
gi|300160047|gb|EFJ26666.1| hypothetical protein
SELMODRAFT_52963 [Selaginella moellendorffii]
gi|300160333|gb|EFJ26951.1| hypothetical protein
SELMODRAFT_96730 [Selaginella moellendorffii]
Length = 508
Score = 71.6 bits (174), Expect(2) = 3e-23
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Frame = +2
Query: 1412 GLSEQLDLSGLNA-----CYITLRAWKKDGRCNELSVKAKGVFTSV-----LWLVMVMSQ 1561
GLS+++++ GL+ C+ITLRAWK+DGRC++ +VKA + + L++ +
Sbjct: 304 GLSDRVEVEGLDLGNIFDCFITLRAWKRDGRCSDFTVKAHALKGELCVHRRLFVGDGIVS 363
Query: 1562 LLEGKALEGFLNMLKRLRKKRQVDPEAIVSVXXXXXXXXXXXXXXXXVMPYHHLRGDDSM 1741
+ EG++++ F + ++ DD
Sbjct: 364 ITEGESIQRFFEHAEETEEEED----------------------------------DDGF 389
Query: 1742 DKDGNDIDGECSCPQKLAKSPELAREF 1822
DKDGN++DGE S QK AKSPELAR+F
Sbjct: 390 DKDGNELDGEGSRSQKHAKSPELARDF 416
Score = 65.1 bits (157), Expect(2) = 3e-23
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Frame = +3
Query: 1254 QKETRCTSWFCVADTSFQYEVSHDTVQADWHKPF----*TPLEHTTSFEWTVGLSK 1409
+KE RCT WFC ADT+FQYEVS + VQADWH+ TP +H FEW +G ++
Sbjct: 240 RKEPRCTRWFCAADTTFQYEVSDNAVQADWHESIAGEVGTPYQH---FEWALGTAE 292
>ref|NP_181727.1| uncharacterized protein [Arabidopsis thaliana]
gi|1871187|gb|AAB63547.1| unknown protein [Arabidopsis
thaliana] gi|330254962|gb|AEC10056.1| uncharacterized
protein [Arabidopsis thaliana]
Length = 1215
Score = 70.1 bits (170), Expect(2) = 7e-22
Identities = 53/132 (40%), Positives = 71/132 (53%)
Frame = +2
Query: 1427 LDLSGLNACYITLRAWKKDGRCNELSVKAKGVFTSVLWLVMVMSQLLEGKALEGFLNMLK 1606
LDL GL+ CYITLRA+KK+GR +E+SVKA ++ V S+L+ G +GF++ +K
Sbjct: 340 LDLRGLHECYITLRAFKKNGRPSEISVKAH----ALRGQQCVHSRLVVG---DGFVS-IK 391
Query: 1607 RLRKKRQVDPEAIVSVXXXXXXXXXXXXXXXXVMPYHHLRGDDSMDKDGNDIDGECSCPQ 1786
R R A + + +DKDGN++DGEC PQ
Sbjct: 392 RGECIRMFFEHAEEA---------------------EEEEDEVLIDKDGNELDGECLRPQ 430
Query: 1787 KLAKSPELAREF 1822
K AKSPELAREF
Sbjct: 431 KHAKSPELAREF 442
Score = 62.0 bits (149), Expect(2) = 7e-22
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +3
Query: 1251 IQKETRCTSWFCVADTSFQYEVSHDTVQADWHKPF*TPLEHTTSFEWTVG 1400
IQ++ RCT WFCVADT+FQYEV D+V+ADW + F T FEW +G
Sbjct: 267 IQRDPRCTDWFCVADTAFQYEVDIDSVRADWSQYF-TENAGYHHFEWAIG 315