BLASTX nr result

ID: Bupleurum21_contig00010637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010637
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39775.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   132   3e-29
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29

>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = -2

Query: 216 VTFIGLLHACSHMGLVNEGRKFFVSMSKDFGLTPRIEHYGCMVDLLSRAGLLQEAHEFIR 37
           VTFIGLLHACSHMGL++EGR+FF SM++D+G+ P+IEHYGCMVDLLSRAGLL EAHEFI 
Sbjct: 329 VTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFIL 388

Query: 36  NMPIKPNGVVW 4
           NMP+KPNGVVW
Sbjct: 389 NMPMKPNGVVW 399


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = -2

Query: 216 VTFIGLLHACSHMGLVNEGRKFFVSMSKDFGLTPRIEHYGCMVDLLSRAGLLQEAHEFIR 37
           VTFIGLLHACSHMGL++EGR+FF SM++D+G+ P+IEHYGCMVDLLSRAGLL EAHEFI 
Sbjct: 362 VTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFIL 421

Query: 36  NMPIKPNGVVW 4
           NMP+KPNGVVW
Sbjct: 422 NMPMKPNGVVW 432


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = -2

Query: 216 VTFIGLLHACSHMGLVNEGRKFFVSMSKDFGLTPRIEHYGCMVDLLSRAGLLQEAHEFIR 37
           VTFIGLLHACSHMGL++EGR+FF SM++D+G+ P+IEHYGCMVDLLSRAGLL EAHEFI 
Sbjct: 362 VTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFIL 421

Query: 36  NMPIKPNGVVW 4
           NMP+KPNGVVW
Sbjct: 422 NMPMKPNGVVW 432


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  130 bits (328), Expect = 9e-29
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = -2

Query: 216 VTFIGLLHACSHMGLVNEGRKFFVSMSKDFGLTPRIEHYGCMVDLLSRAGLLQEAHEFIR 37
           VTFIG+LHACSHMG+V +GRK+F SM++D+G+ PRIEHYGCMVDL SRAGLLQEAHEFI 
Sbjct: 347 VTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIM 406

Query: 36  NMPIKPNGVVW 4
           NMPI PNGVVW
Sbjct: 407 NMPIAPNGVVW 417


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  130 bits (328), Expect = 9e-29
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = -2

Query: 216 VTFIGLLHACSHMGLVNEGRKFFVSMSKDFGLTPRIEHYGCMVDLLSRAGLLQEAHEFIR 37
           VTFIG+LHACSHMG+V +GRK+F SM++D+G+ PRIEHYGCMVDL SRAGLLQEAHEFI 
Sbjct: 347 VTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIM 406

Query: 36  NMPIKPNGVVW 4
           NMPI PNGVVW
Sbjct: 407 NMPIAPNGVVW 417


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