BLASTX nr result

ID: Bupleurum21_contig00010618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010618
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135335.1| PREDICTED: cysteine synthase, chloroplastic/...    70   2e-10
gb|ACU19896.1| unknown [Glycine max]                                   69   4e-10
ref|NP_001235131.1| OAS-TL4 cysteine synthase [Glycine max] gi|1...    69   4e-10
ref|XP_004167180.1| PREDICTED: cysteine synthase, chloroplastic/...    68   7e-10
ref|XP_003518877.1| PREDICTED: cysteine synthase, chloroplastic/...    68   9e-10

>ref|XP_004135335.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like
           [Cucumis sativus]
          Length = 390

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = -2

Query: 226 PLTTSAYSSKSQLFIHANC-----LKPNFISLKKNVLLPSSPIVCKAVSVKPHSETKALN 62
           PL++S  +SKS L +  +      + P+ +   K+ L  +  + CKAVS+KP +E + LN
Sbjct: 13  PLSSSVSNSKSSLLLFNSPPTSLRILPSLLHSSKSNLHATLSVTCKAVSIKPQTEIEDLN 72

Query: 61  IAQDVTQLIGNTPMVYLNNI 2
           IA DVTQL+G TPMVYLNNI
Sbjct: 73  IASDVTQLVGKTPMVYLNNI 92


>gb|ACU19896.1| unknown [Glycine max]
          Length = 389

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = -2

Query: 220 TTSAYSSKSQLFIHANCLKPNFISLKKNVLLPSSPIVCKAVSVKPHSETKALNIAQDVTQ 41
           TT+A S +     +++C +P       + + P S +VCKAVSVKP +E + LNIA+DVTQ
Sbjct: 27  TTAATSLRQ---FNSHCRRP-----LASRISPPSTVVCKAVSVKPQTEIEGLNIAEDVTQ 78

Query: 40  LIGNTPMVYLNNI 2
           LIG TPMVYLNNI
Sbjct: 79  LIGKTPMVYLNNI 91


>ref|NP_001235131.1| OAS-TL4 cysteine synthase [Glycine max] gi|148562457|gb|ABQ88339.1|
           OAS-TL4 cysteine synthase [Glycine max]
           gi|148562460|gb|ABQ88340.1| OAS-TL4 cysteine synthase
           [Glycine max]
          Length = 389

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/73 (52%), Positives = 49/73 (67%)
 Frame = -2

Query: 220 TTSAYSSKSQLFIHANCLKPNFISLKKNVLLPSSPIVCKAVSVKPHSETKALNIAQDVTQ 41
           TT+A S +     +++C +P    +      P S +VCKAVSVKP +E + LNIA+DVTQ
Sbjct: 27  TTAATSLRQ---FNSHCRRPLATRIS-----PPSTVVCKAVSVKPQTEIEGLNIAEDVTQ 78

Query: 40  LIGNTPMVYLNNI 2
           LIG TPMVYLNNI
Sbjct: 79  LIGKTPMVYLNNI 91


>ref|XP_004167180.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like
           [Cucumis sativus]
          Length = 390

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = -2

Query: 226 PLTTSAYSSKSQLFIHANC-----LKPNFISLKKNVLLPSSPIVCKAVSVKPHSETKALN 62
           PL++S  +S+S L +  +      + P+ +   K+ L  +  + CKAVS+KP +E + LN
Sbjct: 13  PLSSSVSNSESSLLLFNSPPTSLRILPSLLHSSKSNLHATLSVTCKAVSIKPQTEIEDLN 72

Query: 61  IAQDVTQLIGNTPMVYLNNI 2
           IA DVTQL+G TPMVYLNNI
Sbjct: 73  IASDVTQLVGKTPMVYLNNI 92


>ref|XP_003518877.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like
           isoform 2 [Glycine max]
          Length = 384

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -2

Query: 121 SPIVCKAVSVKPHSETKALNIAQDVTQLIGNTPMVYLNNI 2
           S +VCKAVSVKP +ET+ LNIA DVTQLIG TPMVYLNNI
Sbjct: 57  STVVCKAVSVKPQTETEGLNIADDVTQLIGKTPMVYLNNI 96


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