BLASTX nr result

ID: Bupleurum21_contig00010615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010615
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518877.1| PREDICTED: cysteine synthase, chloroplastic/...   114   6e-24
ref|XP_003518876.1| PREDICTED: cysteine synthase, chloroplastic/...   114   6e-24
ref|XP_004135335.1| PREDICTED: cysteine synthase, chloroplastic/...   113   2e-23
ref|XP_003632085.1| PREDICTED: cysteine synthase, chloroplastic/...   113   2e-23
ref|XP_002277485.1| PREDICTED: cysteine synthase, chloroplastic/...   113   2e-23

>ref|XP_003518877.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like
           isoform 2 [Glycine max]
          Length = 384

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/70 (82%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
 Frame = -3

Query: 205 LSSSP--IVCKAVSVEPLSETKALNIAQDVTQLIGKTPMVYLNNIAKGSAANIAAKLEIM 32
           +SSSP  +VCKAVSV+P +ET+ LNIA DVTQLIGKTPMVYLNNI KGS ANIAAKLEIM
Sbjct: 52  ISSSPSTVVCKAVSVKPQTETEGLNIADDVTQLIGKTPMVYLNNIVKGSVANIAAKLEIM 111

Query: 31  EPCCSVKDRI 2
           EPCCSVKDRI
Sbjct: 112 EPCCSVKDRI 121


>ref|XP_003518876.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like
           isoform 1 [Glycine max]
          Length = 394

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/70 (82%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
 Frame = -3

Query: 205 LSSSP--IVCKAVSVEPLSETKALNIAQDVTQLIGKTPMVYLNNIAKGSAANIAAKLEIM 32
           +SSSP  +VCKAVSV+P +ET+ LNIA DVTQLIGKTPMVYLNNI KGS ANIAAKLEIM
Sbjct: 52  ISSSPSTVVCKAVSVKPQTETEGLNIADDVTQLIGKTPMVYLNNIVKGSVANIAAKLEIM 111

Query: 31  EPCCSVKDRI 2
           EPCCSVKDRI
Sbjct: 112 EPCCSVKDRI 121


>ref|XP_004135335.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like
           [Cucumis sativus]
          Length = 390

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 8/114 (7%)
 Frame = -3

Query: 319 ASLINK---PLTTSAYSSKSQLFIHANC-----LKPNFINLKKNVLLSSSPIVCKAVSVE 164
           +S IN    PL++S  +SKS L +  +      + P+ ++  K+ L ++  + CKAVS++
Sbjct: 4   SSFINSSISPLSSSVSNSKSSLLLFNSPPTSLRILPSLLHSSKSNLHATLSVTCKAVSIK 63

Query: 163 PLSETKALNIAQDVTQLIGKTPMVYLNNIAKGSAANIAAKLEIMEPCCSVKDRI 2
           P +E + LNIA DVTQL+GKTPMVYLNNI KG  AN+AAKLE+MEPCCSVKDRI
Sbjct: 64  PQTEIEDLNIASDVTQLVGKTPMVYLNNIVKGCVANVAAKLEMMEPCCSVKDRI 117


>ref|XP_003632085.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic isoform 2
           [Vitis vinifera]
          Length = 373

 Score =  113 bits (282), Expect = 2e-23
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 4/111 (3%)
 Frame = -3

Query: 322 MASLINKPLTTSAYSSKSQLFIHANC---LKPNFINLKKNVLLSSS-PIVCKAVSVEPLS 155
           MASLIN   +T+  +SK +     +    + P  +NLK N     S  +VCKAVSV+P +
Sbjct: 1   MASLINP--STNFCNSKVRTGSRVSQQLRVNPLSLNLKNNQRGKVSFSVVCKAVSVKPQT 58

Query: 154 ETKALNIAQDVTQLIGKTPMVYLNNIAKGSAANIAAKLEIMEPCCSVKDRI 2
           + + LNIA+DVTQLIGKTPMVYLNNI KGS ANIAAKLEIMEPCCSVKDRI
Sbjct: 59  DVEGLNIAEDVTQLIGKTPMVYLNNIVKGSVANIAAKLEIMEPCCSVKDRI 109


>ref|XP_002277485.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic isoform 1
           [Vitis vinifera] gi|296084309|emb|CBI24697.3| unnamed
           protein product [Vitis vinifera]
          Length = 382

 Score =  113 bits (282), Expect = 2e-23
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 4/111 (3%)
 Frame = -3

Query: 322 MASLINKPLTTSAYSSKSQLFIHANC---LKPNFINLKKNVLLSSS-PIVCKAVSVEPLS 155
           MASLIN   +T+  +SK +     +    + P  +NLK N     S  +VCKAVSV+P +
Sbjct: 1   MASLINP--STNFCNSKVRTGSRVSQQLRVNPLSLNLKNNQRGKVSFSVVCKAVSVKPQT 58

Query: 154 ETKALNIAQDVTQLIGKTPMVYLNNIAKGSAANIAAKLEIMEPCCSVKDRI 2
           + + LNIA+DVTQLIGKTPMVYLNNI KGS ANIAAKLEIMEPCCSVKDRI
Sbjct: 59  DVEGLNIAEDVTQLIGKTPMVYLNNIVKGSVANIAAKLEIMEPCCSVKDRI 109


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