BLASTX nr result

ID: Bupleurum21_contig00010614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010614
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncat...    70   5e-10
ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|35551...    70   5e-10
ref|XP_003615989.1| Cell division protease ftsH-like protein [Me...    68   2e-09
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09

>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
 Frame = -3

Query: 558 IISHILTRLPVKTLGRCRCVCKSWEYILSDPDSHFITCHIKHTSKHPDYECLIMSMKMDW 379
           I++ IL +LP K+L R RCVCK+W  ++ DP   F+  H   +   P    L+MS K   
Sbjct: 37  IVAEILAKLPAKSLMRFRCVCKTWSSLIRDP--FFVKLHQNQSLNKPCKTGLLMSTKHQL 94

Query: 378 YDNGSVHI--LSRSRLSYTRVDNAPSGILIGSINGLVC-VNYKHLFLLWNPVTGLAKTIV 208
           +++  V      +  L    +    S  ++G  NGL C VN KH   ++N  T  + TI 
Sbjct: 95  FNSHFVFADHEGKQALEEDTISIPKSSNVLGIANGLACIVNDKHRISVYNLSTRESTTIP 154

Query: 207 PPQQYFESQSQMYCGSLISGLCWDDVESQYKIV 109
           PP Q    Q ++  G       +D + ++YKIV
Sbjct: 155 PPPQEIRIQDRLSFG-------FDPLANEYKIV 180


>ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355510059|gb|AES91201.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 515

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
 Frame = -3

Query: 558 IISHILTRLPVKTLGRCRCVCKSWEYILSDPDSHFITCHIKHTSKHPDY--------ECL 403
           II  IL RLPV++L + RCVCK W+ ++SDP   F   H+  ++ +P          +C 
Sbjct: 40  IIVEILLRLPVRSLLQFRCVCKLWKTLISDP--QFAKKHVSISTAYPQLVSVFVSIAKCN 97

Query: 402 IMSMKM-DWYDNGSVHILSRSRLSYTRVDNAPSGILIGSINGLVCVNYKHLFLLWNPVTG 226
           ++S  +    DN S H   R   +   + +  S  +IGS NGL+C++  + F LWNP   
Sbjct: 98  LVSYPLKPLLDNPSAH---RVEPADFEMIHTTSMTIIGSCNGLLCLSDFYQFTLWNPSIK 154

Query: 225 LAKTIVPPQQYFES-QSQMYCGSLISGLCWDDVESQYKIV 109
           L     P    F+S  S+ +   L  G  +D V  +YK++
Sbjct: 155 LKSKPSPTIIAFDSFDSKRF---LYRGFGYDQVNDRYKVL 191


>ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|355510053|gb|AES91195.1|
           F-box protein [Medicago truncatula]
          Length = 607

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
 Frame = -3

Query: 558 IISHILTRLPVKTLGRCRCVCKSWEYILSDPDSHFITCHIKHTSKHPDY--------ECL 403
           II  IL RLPV++L + RCVCK W+ ++SDP   F   H+  ++ +P          +C 
Sbjct: 40  IIVEILLRLPVRSLLQFRCVCKLWKTLISDP--QFAKKHVSISTAYPQLVSVFVSIAKCN 97

Query: 402 IMSMKM-DWYDNGSVHILSRSRLSYTRVDNAPSGILIGSINGLVCVNYKHLFLLWNPVTG 226
           ++S  +    DN S H   R   +   + +  S  +IGS NGL+C++  + F LWNP   
Sbjct: 98  LVSYPLKPLLDNPSAH---RVEPADFEMIHTTSMTIIGSCNGLLCLSDFYQFTLWNPSIK 154

Query: 225 LAKTIVPPQQYFES-QSQMYCGSLISGLCWDDVESQYKIV 109
           L     P    F+S  S+ +   L  G  +D V  +YK++
Sbjct: 155 LKSKPSPTIIAFDSFDSKRF---LYRGFGYDQVNDRYKVL 191


>ref|XP_003615989.1| Cell division protease ftsH-like protein [Medicago truncatula]
           gi|355517324|gb|AES98947.1| Cell division protease
           ftsH-like protein [Medicago truncatula]
          Length = 960

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
 Frame = -3

Query: 573 LSDDIIISHILTRLPVKTLGRCRCVCKSWEYILSDPDSHFITCHIKHTSKHPDYE---CL 403
           + DDI  S IL++LP+K+L R  CV KSW ++  D DS F+T +  +      Y+    L
Sbjct: 35  IHDDIAFS-ILSKLPIKSLKRFECVRKSWSHLTEDEDSPFMTMYRNNLFLSQPYDGDTSL 93

Query: 402 IMSM--KMDWYD--NGSVHILSRSRLSYTRVDNAPSGILIGSINGLVCVNYKHLFL-LWN 238
           +++M  K++ +   +G       S ++  + D     I  GS+NG++C+ Y    + LWN
Sbjct: 94  LVNMCPKVERFHSLSGERFANRLSLINPIQSDQVLQIIGFGSVNGILCLQYGETRISLWN 153

Query: 237 PVTGLAKTIVPP-------QQYFESQSQMYCGSLISGLCWDDVESQYKIV 109
           P T   K I P           F+     Y  + I G  +D V   YK++
Sbjct: 154 PTTNEFKVIPPAGTRLPHIVHTFKPVDPFYIQTTIHGFGYDSVADDYKLI 203


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
 Frame = -3

Query: 576 RLSDDIIISHILTRLPVKTLGRCRCVCKSWEYILSDPDSHFITCHIKHTSKHPDY----- 412
           +L  DII+  ILT LPVK+L R +CVCK W+ ++SDP   F+  H+K   +  +      
Sbjct: 3   KLPQDIIVD-ILTYLPVKSLVRFKCVCKPWQLLISDP--RFVKLHLKRAIEGNNINRQRL 59

Query: 411 ----ECLIMSMKMDWYDNGSVHILSRSRLSY----TRVDNAPSGILIGSINGLVCVNY-- 262
               E L  S+  +   +G   I +   L Y    +R ++     + GS +GLVC+    
Sbjct: 60  LVAAEPLYSSVDFEAASDGD-GINAVMELPYPSAASRTESFAFASIRGSCDGLVCIRNGG 118

Query: 261 -KHLFLLWNPVTGLAKTIVPPQQYFESQSQMYCGSLISGLCWDDVESQYKIVMGYKDTNS 85
             H   LWNP T  +K +  P       S +     ++GL +D     YK+V+    T +
Sbjct: 119 DVHDMFLWNPSTRESKKLPKP------SSSVQKHGFLTGLGYDSTIDDYKLVIACLTTAN 172

Query: 84  SLH 76
             H
Sbjct: 173 GSH 175


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