BLASTX nr result

ID: Bupleurum21_contig00010610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010610
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310593.1| predicted protein [Populus trichocarpa] gi|1...   102   4e-20
ref|XP_002304321.1| predicted protein [Populus trichocarpa] gi|1...   101   6e-20
ref|XP_002284455.1| PREDICTED: 60S ribosomal protein L26-1 isofo...   101   6e-20
ref|XP_002525271.1| 60S ribosomal protein L26, putative [Ricinus...   101   7e-20
ref|XP_003593461.1| 60S ribosomal protein L26-1 [Medicago trunca...   100   2e-19

>ref|XP_002310593.1| predicted protein [Populus trichocarpa] gi|118483302|gb|ABK93553.1|
           unknown [Populus trichocarpa]
           gi|222853496|gb|EEE91043.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/72 (72%), Positives = 55/72 (76%)
 Frame = -3

Query: 405 RKWVIHIERITREKVNGSTVNVGVNPSKCVITXXXXXXXXXXXXXXKAKGRAVADKEKGT 226
           RKWVIHIERITREKVNGSTVNVG+NPSK VIT              KAKGRAV DKEKGT
Sbjct: 75  RKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAVGDKEKGT 134

Query: 225 KFTTEDIMQSID 190
           KFT EDIMQ++D
Sbjct: 135 KFTAEDIMQNVD 146


>ref|XP_002304321.1| predicted protein [Populus trichocarpa] gi|118483998|gb|ABK93886.1|
           unknown [Populus trichocarpa]
           gi|222841753|gb|EEE79300.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/72 (70%), Positives = 55/72 (76%)
 Frame = -3

Query: 405 RKWVIHIERITREKVNGSTVNVGVNPSKCVITXXXXXXXXXXXXXXKAKGRAVADKEKGT 226
           RKWVIH+ERITREKVNGSTVNVG+NPSK VIT              KAKGRAV DK+KGT
Sbjct: 75  RKWVIHVERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAVGDKDKGT 134

Query: 225 KFTTEDIMQSID 190
           KFT EDIMQS+D
Sbjct: 135 KFTAEDIMQSVD 146


>ref|XP_002284455.1| PREDICTED: 60S ribosomal protein L26-1 isoform 1 [Vitis vinifera]
           gi|359480547|ref|XP_003632488.1| PREDICTED: 60S
           ribosomal protein L26-1-like [Vitis vinifera]
           gi|359480553|ref|XP_003632490.1| PREDICTED: 60S
           ribosomal protein L26-1 isoform 2 [Vitis vinifera]
           gi|359480556|ref|XP_003632491.1| PREDICTED: 60S
           ribosomal protein L26-1 isoform 3 [Vitis vinifera]
           gi|147772865|emb|CAN75906.1| hypothetical protein
           VITISV_001974 [Vitis vinifera]
           gi|296087313|emb|CBI33687.3| unnamed protein product
           [Vitis vinifera] gi|296087319|emb|CBI33693.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/72 (70%), Positives = 55/72 (76%)
 Frame = -3

Query: 405 RKWVIHIERITREKVNGSTVNVGVNPSKCVITXXXXXXXXXXXXXXKAKGRAVADKEKGT 226
           RKWVIH+ERITREKVNGSTVNVG+NPSK VIT              KAKGRA ADK+KGT
Sbjct: 75  RKWVIHVERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGT 134

Query: 225 KFTTEDIMQSID 190
           KFT EDIMQS+D
Sbjct: 135 KFTAEDIMQSVD 146


>ref|XP_002525271.1| 60S ribosomal protein L26, putative [Ricinus communis]
           gi|223535429|gb|EEF37099.1| 60S ribosomal protein L26,
           putative [Ricinus communis]
          Length = 146

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/72 (70%), Positives = 56/72 (77%)
 Frame = -3

Query: 405 RKWVIHIERITREKVNGSTVNVGVNPSKCVITXXXXXXXXXXXXXXKAKGRAVADKEKGT 226
           RKWVIHIERITREKVNGSTVNVG+NPSK VIT              KAKGRA ADK+KGT
Sbjct: 75  RKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGT 134

Query: 225 KFTTEDIMQSID 190
           KFT+EDIMQ++D
Sbjct: 135 KFTSEDIMQTVD 146


>ref|XP_003593461.1| 60S ribosomal protein L26-1 [Medicago truncatula]
           gi|355482509|gb|AES63712.1| 60S ribosomal protein L26-1
           [Medicago truncatula] gi|388504248|gb|AFK40190.1|
           unknown [Medicago truncatula]
          Length = 146

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/72 (72%), Positives = 54/72 (75%)
 Frame = -3

Query: 405 RKWVIHIERITREKVNGSTVNVGVNPSKCVITXXXXXXXXXXXXXXKAKGRAVADKEKGT 226
           RKWVIHIERITREKVNGSTVNVGVNPSK VIT              KAKGRA ADKEKGT
Sbjct: 75  RKWVIHIERITREKVNGSTVNVGVNPSKVVITKLRLDKDRKSLLDRKAKGRAAADKEKGT 134

Query: 225 KFTTEDIMQSID 190
           KF  EDIMQ++D
Sbjct: 135 KFAPEDIMQTVD 146


Top