BLASTX nr result

ID: Bupleurum21_contig00010609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010609
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282251.2| PREDICTED: uncharacterized protein LOC100248...   278   1e-72
emb|CBI16293.3| unnamed protein product [Vitis vinifera]              259   7e-67
ref|XP_002532599.1| nucleic acid binding protein, putative [Rici...   248   2e-63
ref|XP_002275477.2| PREDICTED: zinc finger protein NUTCRACKER-li...   234   1e-59
ref|XP_003520648.1| PREDICTED: zinc finger protein JACKDAW-like ...   234   1e-59

>ref|XP_002282251.2| PREDICTED: uncharacterized protein LOC100248459 [Vitis vinifera]
          Length = 527

 Score =  278 bits (711), Expect = 1e-72
 Identities = 170/312 (54%), Positives = 205/312 (65%), Gaps = 39/312 (12%)
 Frame = -2

Query: 826  KKVYLCPEKTCVHHHPSRALGDLTGVKKHYSRKHGEXXXXXXXXXXKYAVQSDWKAHSKI 647
            KKVY+CPEK+CVHH+P+RALGDLTG+KKHYSRKHGE          KYAVQSDWKAHSKI
Sbjct: 101  KKVYICPEKSCVHHNPTRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI 160

Query: 646  CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESSR-TPAAQDTIHLRNEVMM-NMNNLQ 473
            CGTREYKCDCGTLFSRKDSFITHRAFCDALAEES+R T  +      RNE+M  +++N Q
Sbjct: 161  CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVSAPNPIFRNELMNGSISNPQ 220

Query: 472  SSGSSQFSAMF-----GLDQ-TGQFNLDGQKSRLPLWLDH-----------NSN-AFLAS 347
            +    QFS++F     G +Q  G  N DGQK RLPLWLDH           N+N +FLA 
Sbjct: 221  AHIIPQFSSVFRPEFVGSEQLVGHLNADGQKPRLPLWLDHANSHLNNPIGVNTNGSFLAP 280

Query: 346  TSNGLPQELNQQTSNVYG-----------------LSSPALPRILKEEEDTSTGNLMSSM 218
            TS GLP+ +     ++YG                  +S  LPR+LKEEE+ + GNL  S+
Sbjct: 281  TSAGLPEMVQTAPMSMYGSPASSQNQWLQRCSEASFTSSTLPRVLKEEEE-NKGNLSESI 339

Query: 217  YYNNISSTQNQEISSQSHMSATALLQKAATMGSTRSNSSGMFANSFGLMNSTMSSNVHNF 38
              +  SS QNQ+ SS +HMSATALLQKAA MGST+SNS+      FG +NS++ SN   F
Sbjct: 340  -TSLFSSNQNQQESS-AHMSATALLQKAAQMGSTKSNSAFFSTTGFGSINSSL-SNTTPF 396

Query: 37   SNMQAG--NRQV 8
            S+   G  N QV
Sbjct: 397  SSYPHGRSNNQV 408


>emb|CBI16293.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score =  259 bits (661), Expect = 7e-67
 Identities = 161/306 (52%), Positives = 194/306 (63%), Gaps = 33/306 (10%)
 Frame = -2

Query: 826 KKVYLCPEKTCVHHHPSRALGDLTGVKKHYSRKHGEXXXXXXXXXXKYAVQSDWKAHSKI 647
           KKVY+CPEK+CVHH+P+RALGDLTG+KKHYSRKHGE          KYAVQSDWKAHSKI
Sbjct: 100 KKVYICPEKSCVHHNPTRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI 159

Query: 646 CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESSR-TPAAQDTIHLRNEVMM-NMNNLQ 473
           CGTREYKCDCGTLFSRKDSFITHRAFCDALAEES+R T  +      RNE+M  +++N Q
Sbjct: 160 CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVSAPNPIFRNELMNGSISNPQ 219

Query: 472 SSGSSQFSAMFGLDQTGQFNLDGQKSRLPLWLDH-----------NSN-AFLASTSNGLP 329
           +    QFS+                 RLPLWLDH           N+N +FLA TS GLP
Sbjct: 220 AHIIPQFSS----------------PRLPLWLDHANSHLNNPIGVNTNGSFLAPTSAGLP 263

Query: 328 QELNQQTSNVYG-----------------LSSPALPRILKEEEDTSTGNLMSSMYYNNIS 200
           + +     ++YG                  +S  LPR+LKEEE+ + GNL  S+  +  S
Sbjct: 264 EMVQTAPMSMYGSPASSQNQWLQRCSEASFTSSTLPRVLKEEEE-NKGNLSESI-TSLFS 321

Query: 199 STQNQEISSQSHMSATALLQKAATMGSTRSNSSGMFANSFGLMNSTMSSNVHNFSNMQAG 20
           S QNQ+ SS +HMSATALLQKAA MGST+SNS+      FG +NS++ SN   FS+   G
Sbjct: 322 SNQNQQESS-AHMSATALLQKAAQMGSTKSNSAFFSTTGFGSINSSL-SNTTPFSSYPHG 379

Query: 19  --NRQV 8
             N QV
Sbjct: 380 RSNNQV 385


>ref|XP_002532599.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223527655|gb|EEF29765.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 543

 Score =  248 bits (632), Expect = 2e-63
 Identities = 162/312 (51%), Positives = 201/312 (64%), Gaps = 47/312 (15%)
 Frame = -2

Query: 826  KKVYLCPEKTCVHHHPSRALGDLTGVKKHYSRKHGEXXXXXXXXXXKYAVQSDWKAHSKI 647
            KKVY+CPEK+CVHH PSRALGDLTG+KKH+SRKHGE          KYAVQSDWKAHSKI
Sbjct: 102  KKVYICPEKSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI 161

Query: 646  CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESSR-TP-AAQDTIHLRNEVMMNMNNL- 476
            CGTREY+CDCGTLFSRKDSFITHRAFCDALAEES R TP +A    +LRN+++   N++ 
Sbjct: 162  CGTREYRCDCGTLFSRKDSFITHRAFCDALAEESGRFTPVSAAINANLRNDLINGANSIN 221

Query: 475  ------QSSGSSQFSAMF--------GLDQTGQFNL--DGQKSRLPLWLDHNSNAFL--- 353
                  Q++  SQFS++F          +  G  NL  D QK RLP+WLD N+N  L   
Sbjct: 222  LPPPHHQTTVISQFSSVFRPEFGTTTASELLGSNNLGVDVQKPRLPIWLD-NANPQLNPI 280

Query: 352  ---ASTSNGLPQELNQ-QTSNVY---------------GLSSPALPRILKEEEDTSTGNL 230
               ++ ++ LP EL Q Q  N++               GL + +LPR LKEEE  S G+L
Sbjct: 281  GVGSNANSFLPHELVQTQQINMFGSGSSQLQWLSKYQEGLFTGSLPRGLKEEEG-SKGDL 339

Query: 229  ---MSSMYYNNISSTQNQ---EISSQSHMSATALLQKAATMGSTRSNSSGMFANSFGLMN 68
               ++S+Y +N    Q +     SS +HMSATALLQKAA MGSTRSN      NS  LM+
Sbjct: 340  TESITSLYSSNHHHQQQRSSLSSSSSAHMSATALLQKAAQMGSTRSN------NSISLMS 393

Query: 67   STMSSNVHNFSN 32
            S++ SNV NF++
Sbjct: 394  SSL-SNVSNFNS 404


>ref|XP_002275477.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 490

 Score =  234 bits (598), Expect = 1e-59
 Identities = 147/294 (50%), Positives = 172/294 (58%), Gaps = 32/294 (10%)
 Frame = -2

Query: 826 KKVYLCPEKTCVHHHPSRALGDLTGVKKHYSRKHGEXXXXXXXXXXKYAVQSDWKAHSKI 647
           KKVY+CPEKTCVHH PSRALGDLTG+KKH+SRKHGE          KYAVQSDWKAHSK 
Sbjct: 99  KKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT 158

Query: 646 CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESSR-TPAAQDTIHLRNEVM-------- 494
           CGTREYKCDCGTLFSRKDSFITHRAFCDALAEE +R T  A   ++ RN+ M        
Sbjct: 159 CGTREYKCDCGTLFSRKDSFITHRAFCDALAEERARITSVAATNLNFRNDSMNETVINPQ 218

Query: 493 -------MNMNNLQSSGSSQFSAMFGLDQTGQFNLDGQKSRLPLWLDHNSNAFLASTSNG 335
                         ++G SQF   FG D TG          LP  +   ++    S+S G
Sbjct: 219 PGLLNGFSGRGGPDAAGISQFCPGFGPDLTG----------LPEMVQVAASNLFGSSSVG 268

Query: 334 LPQELNQQ--------TSNVYGLSSPALPRILKEEEDT--STGNLMSSMYYNNISSTQNQ 185
                N+         TSN   LS  +LP  LKEEE    S    ++S+Y    S   +Q
Sbjct: 269 NFGSCNESPWLDKSSATSNGANLSLASLPHALKEEEGNKGSMVETLTSLY----SGNHSQ 324

Query: 184 EISSQSHMSATALLQKAATMGSTRSNSSGMFANSFGLMNS------TMSSNVHN 41
           + S  + MSATALLQKAA MGSTRSN S  F NSFG+MNS      T+++  HN
Sbjct: 325 QSSPAAPMSATALLQKAAQMGSTRSNPS-FFGNSFGVMNSSGSHSTTLNTLTHN 377


>ref|XP_003520648.1| PREDICTED: zinc finger protein JACKDAW-like [Glycine max]
          Length = 512

 Score =  234 bits (598), Expect = 1e-59
 Identities = 136/301 (45%), Positives = 183/301 (60%), Gaps = 35/301 (11%)
 Frame = -2

Query: 826 KKVYLCPEKTCVHHHPSRALGDLTGVKKHYSRKHGEXXXXXXXXXXKYAVQSDWKAHSKI 647
           KKVY+CPEKTCVHH  +RALGDLTG+KKHYSRKHGE          KYAVQSDWKAH+K 
Sbjct: 103 KKVYICPEKTCVHHDAARALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHTKT 162

Query: 646 CGTREYKCDCGTLFSRKDSFITHRAFCDALAEESSR-TPAAQDTIHLRNEVMMNMNNLQS 470
           CGTREYKCDCG LFSRKDSFITHRAFCDALA+ESSR T  A  +++ ++E    +N   S
Sbjct: 163 CGTREYKCDCGNLFSRKDSFITHRAFCDALADESSRLTSVASTSLNFKSEDATMINTQAS 222

Query: 469 SGSSQFSAMFGLDQTGQF----------NLDGQKSRLPLWLDHNS-------NAFLASTS 341
             +       G+    QF            D Q+  L LWL+  +       +  L+S+S
Sbjct: 223 LSTRGLITDHGMQNVSQFGPHGFRLMNMGTDQQRPNLSLWLNQGNHHINNPLDVALSSSS 282

Query: 340 NGLPQELNQQTSNV--------------YGL---SSPALPRILKEEEDTSTGNLMSSMYY 212
           +GLP+ ++   +N+              +G+   S+ + P ++ ++ D    +L +SMY 
Sbjct: 283 SGLPEVVHMAQANINNNALIGSSSVFSNFGMPASSNSSNPNLMGKKGDGGASDL-ASMY- 340

Query: 211 NNISSTQNQEISSQSHMSATALLQKAATMGSTRSNSSGMFANSFGLMNSTMSSNVHNFSN 32
              S +QN+  +S S MSATALLQKAA MGSTRS +  +F+ SFG+M+S+ + +    SN
Sbjct: 341 ---SESQNKNSNSTSPMSATALLQKAAQMGSTRSTNPSIFSGSFGVMSSSSTQSTSLNSN 397

Query: 31  M 29
           +
Sbjct: 398 I 398


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