BLASTX nr result

ID: Bupleurum21_contig00010606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010606
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   216   1e-53
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   214   5e-53
gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   199   1e-48
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-48
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   197   4e-48

>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
            gi|297745600|emb|CBI40765.3| unnamed protein product
            [Vitis vinifera]
          Length = 353

 Score =  216 bits (550), Expect = 1e-53
 Identities = 116/157 (73%), Positives = 126/157 (80%), Gaps = 3/157 (1%)
 Frame = +3

Query: 582  GAISNVSLHQAATSGGTATYEGRFDILSLSGSFLLSEVGGQRSRTGGLSVSLSGPDGRIL 761
            GAISNV+L Q ATSGGT TYEGRF+ILSLSGSFLLSE GGQRSRTGGLSVSLSGPDGR+L
Sbjct: 197  GAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRSRTGGLSVSLSGPDGRVL 256

Query: 762  GGCVAGLLTAASPVQVIVGSFMVDGHKGSKAVKQTEPLSAPPK--PI-SGAGVTGPSSPQ 932
            GG VAGLLTAASPVQV+VGSF+ DG K SK+  Q EP SAPPK  P+  G GVTG SSP 
Sbjct: 257  GGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKIAPVGGGGGVTGTSSPP 316

Query: 933  SRGTLSEXXXXXXXXLNQSTEALNNNNFQGMSSMPWK 1043
            SRGTLSE        LNQST A NN+N  GM+S+PWK
Sbjct: 317  SRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPWK 353



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 57/156 (36%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
 Frame = +2

Query: 2   QSMHLSFNSGGAAVYKPLPNSTPPPAQLQQV----PTGGAAEPSVXXXXXXXXXXXXXXX 169
           Q+M L+F+  GAAVYKP+  ++PP            TGGA  P                 
Sbjct: 31  QNMRLAFSPDGAAVYKPVSGTSPPYQSSGGTGGDGSTGGAIIPH--------------GL 76

Query: 170 XXXMG-ESAKRKRGRPRKYAPDGSMALTLTSPPS------SGGALVT-XXXXXXXXXXXX 325
              MG E  KRKRGRPRKY PDG+MAL L+  PS      SGGA  +             
Sbjct: 77  NMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGGAFSSPPASAGSASPSSL 136

Query: 326 XXXXXXXXXXXXXHQMKALDSNFAVSAGIGFTPHII 433
                         QM+AL      SAG+GFTPH+I
Sbjct: 137 KKARGRPPGSSKKQQMEALG-----SAGVGFTPHVI 167


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  214 bits (545), Expect = 5e-53
 Identities = 115/156 (73%), Positives = 125/156 (80%), Gaps = 3/156 (1%)
 Frame = +3

Query: 582  GAISNVSLHQAATSGGTATYEGRFDILSLSGSFLLSEVGGQRSRTGGLSVSLSGPDGRIL 761
            GAISNV+L Q ATSGGT TYEGRF+ILSLSGSFLLSE GGQRSRTGGLSVSLSGPDGR+L
Sbjct: 197  GAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRSRTGGLSVSLSGPDGRVL 256

Query: 762  GGCVAGLLTAASPVQVIVGSFMVDGHKGSKAVKQTEPLSAPPK--PI-SGAGVTGPSSPQ 932
            GG VAGLLTAASPVQV+VGSF+ DG K SK+  Q EP SAPPK  P+  G GVTG SSP 
Sbjct: 257  GGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKIAPVGGGGGVTGTSSPP 316

Query: 933  SRGTLSEXXXXXXXXLNQSTEALNNNNFQGMSSMPW 1040
            SRGTLSE        LNQST A NN+N  GM+S+PW
Sbjct: 317  SRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPW 352



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 57/156 (36%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
 Frame = +2

Query: 2   QSMHLSFNSGGAAVYKPLPNSTPPPAQLQQV----PTGGAAEPSVXXXXXXXXXXXXXXX 169
           Q+M L+F+  GAAVYKP+  ++PP            TGGA  P                 
Sbjct: 31  QNMRLAFSPDGAAVYKPVSGTSPPYQSSGGTGGDGSTGGAIIPH--------------GL 76

Query: 170 XXXMG-ESAKRKRGRPRKYAPDGSMALTLTSPPS------SGGALVT-XXXXXXXXXXXX 325
              MG E  KRKRGRPRKY PDG+MAL L+  PS      SGGA  +             
Sbjct: 77  NMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGGAFSSPPASAGSASPSSL 136

Query: 326 XXXXXXXXXXXXXHQMKALDSNFAVSAGIGFTPHII 433
                         QM+AL      SAG+GFTPH+I
Sbjct: 137 KKARGRPPGSSKKQQMEALG-----SAGVGFTPHVI 167


>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  199 bits (507), Expect = 1e-48
 Identities = 106/155 (68%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
 Frame = +3

Query: 582  GAISNVSLHQAATSGGTATYEGRFDILSLSGSFLLSEVGGQRSRTGGLSVSLSGPDGRIL 761
            GAISNV+L QAATSGGT TYEGRF+ILSLSGSFLLSE GGQRSRTGGLSVSL+GPDGR+L
Sbjct: 208  GAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSESGGQRSRTGGLSVSLAGPDGRVL 267

Query: 762  GGCVAGLLTAASPVQVIVGSFMVDGHKGSKAVKQTEPLSAPPKPISGAGVTGPSSPQSRG 941
            GG VAGLLTAASPVQV+VGSF+ DG K  K    ++P  AP K  +G    G +SP SRG
Sbjct: 268  GGGVAGLLTAASPVQVVVGSFIADGKKEPKHTAPSDPTLAPGKLAAGGAAAGANSPPSRG 327

Query: 942  TLSE-XXXXXXXXLNQSTEALNNNNFQGMSSMPWK 1043
            TLSE         LNQST   NN+N QG+S+MPWK
Sbjct: 328  TLSESSGGGPGSPLNQSTGTCNNSNQQGLSNMPWK 362



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 54/155 (34%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
 Frame = +2

Query: 2   QSMHLSFNSGGAAVYKPLPNSTPPPAQLQQVPTGGAAEPSVXXXXXXXXXXXXXXXXXXM 181
           QSM L+F   G A+YKP+  S+PPP   Q    GG A  +                   +
Sbjct: 32  QSMRLAFAPDGTAIYKPITTSSPPPPPYQG---GGGAGSTGGGDGPSPAAITPHGLNINV 88

Query: 182 GESAKRKRGRPRKYAPDGSMALTLTS-------PPSSGG----ALVTXXXXXXXXXXXXX 328
           GE  KRKRGRPRKY PDG+M+L LT+        P SGG    +                
Sbjct: 89  GEPVKRKRGRPRKYGPDGTMSLALTTVSPTAAVSPGSGGFSPSSAGAGNPASSASAEAMK 148

Query: 329 XXXXXXXXXXXXHQMKALDSNFAVSAGIGFTPHII 433
                        Q+ AL      SAGIGFTPH+I
Sbjct: 149 KARGRPPGSGKKQQLAALG-----SAGIGFTPHVI 178


>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  198 bits (504), Expect = 3e-48
 Identities = 105/154 (68%), Positives = 117/154 (75%)
 Frame = +3

Query: 582  GAISNVSLHQAATSGGTATYEGRFDILSLSGSFLLSEVGGQRSRTGGLSVSLSGPDGRIL 761
            GAISNV+L Q ATSGGT TYEGRF+IL+LSGS+L SE GGQRSR+GGLSV LSGPDGR+L
Sbjct: 119  GAISNVTLRQQATSGGTVTYEGRFEILALSGSYLPSENGGQRSRSGGLSVCLSGPDGRVL 178

Query: 762  GGCVAGLLTAASPVQVIVGSFMVDGHKGSKAVKQTEPLSAPPKPISGAGVTGPSSPQSRG 941
            GG VAGLL AA+PVQV+VGSF+ DG K SK    TEP SA  +     G TG SSP SRG
Sbjct: 179  GGTVAGLLVAAAPVQVVVGSFIADGRKESKTANHTEPSSATSRLPPRGGSTGVSSPPSRG 238

Query: 942  TLSEXXXXXXXXLNQSTEALNNNNFQGMSSMPWK 1043
            TLSE        LNQST A NN+N QGMSSMPW+
Sbjct: 239  TLSESSGGPGSPLNQSTGACNNSNPQGMSSMPWE 272


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
            gi|223551427|gb|EEF52913.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 374

 Score =  197 bits (502), Expect = 4e-48
 Identities = 106/154 (68%), Positives = 116/154 (75%)
 Frame = +3

Query: 582  GAISNVSLHQAATSGGTATYEGRFDILSLSGSFLLSEVGGQRSRTGGLSVSLSGPDGRIL 761
            GAISNV+L Q ATSGG+ TYEGRF+ILSLSGSFL SE GGQRSRTGGLSVSLSGPDGR+L
Sbjct: 221  GAISNVTLRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRSRTGGLSVSLSGPDGRVL 280

Query: 762  GGCVAGLLTAASPVQVIVGSFMVDGHKGSKAVKQTEPLSAPPKPISGAGVTGPSSPQSRG 941
            GG VAGLL AASPVQV+V SF+ D  K  K+    EPLSA  +     G TGPSSP SRG
Sbjct: 281  GGGVAGLLLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRG 340

Query: 942  TLSEXXXXXXXXLNQSTEALNNNNFQGMSSMPWK 1043
            T SE        LNQST A NN+N QG+SSMPWK
Sbjct: 341  TFSESSGGPGSPLNQSTGACNNSNLQGISSMPWK 374



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 36/92 (39%), Positives = 48/92 (52%)
 Frame = +2

Query: 2   QSMHLSFNSGGAAVYKPLPNSTPPPAQLQQVPTGGAAEPSVXXXXXXXXXXXXXXXXXXM 181
           Q+M L+F + G++VYKP+  +T  P+     P+  AA P                     
Sbjct: 27  QNMRLAFGADGSSVYKPMTTATNSPSYQ---PSPSAASPGGFVEGGSLGINVNMGSG--- 80

Query: 182 GESAKRKRGRPRKYAPDGSMALTLTSPPSSGG 277
            ++ KRKRGRPRKY PDG+MAL L S P S G
Sbjct: 81  NDAMKRKRGRPRKYGPDGTMALALVSAPQSVG 112


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