BLASTX nr result

ID: Bupleurum21_contig00010583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010583
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   227   3e-57
ref|XP_003551972.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   225   1e-56
ref|XP_003518718.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   223   8e-56
ref|XP_003517954.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   221   2e-55
gb|AAT40540.1| kelch repeat-containing F-box family protein, put...   221   2e-55

>ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  227 bits (579), Expect = 3e-57
 Identities = 106/137 (77%), Positives = 118/137 (86%)
 Frame = +1

Query: 1   LQTRIWTEIPNMSPVRARADGEIGMPVTAEAPPLVAVVNNELYAADYAEMEVRKYDKGRR 180
           +QTR WTEIPNMSP R+    E  MP TAEAPPLVAVVN+ELYAADYA+MEV+KYDK RR
Sbjct: 405 IQTRTWTEIPNMSPGRSARGAE--MPATAEAPPLVAVVNDELYAADYADMEVKKYDKERR 462

Query: 181 KWETVGRLPERADSMNGWGLAFKACGDRLIVIGGPRAAGEGFIEINAWTPRDGPPQWNLL 360
            W T+GRLPERA SMNGWGLAF+ACGD LIVIGGPR  GEGFIE+N+W P +GPPQWNLL
Sbjct: 463 VWVTIGRLPERAVSMNGWGLAFRACGDMLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLL 522

Query: 361 GRKQSGSFVYNCAVMGC 411
            RK+SG+FVYNCAVMGC
Sbjct: 523 ARKRSGNFVYNCAVMGC 539


>ref|XP_003551972.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  225 bits (574), Expect = 1e-56
 Identities = 106/137 (77%), Positives = 116/137 (84%)
 Frame = +1

Query: 1   LQTRIWTEIPNMSPVRARADGEIGMPVTAEAPPLVAVVNNELYAADYAEMEVRKYDKGRR 180
           LQTR WTEIPNMSP R+    E  MP TAEAPPLVAVVNNELYAADYA+ EV+KYDK RR
Sbjct: 405 LQTRTWTEIPNMSPGRSARGAE--MPATAEAPPLVAVVNNELYAADYADTEVKKYDKERR 462

Query: 181 KWETVGRLPERADSMNGWGLAFKACGDRLIVIGGPRAAGEGFIEINAWTPRDGPPQWNLL 360
            W T+GRLPERA SMNGWGLAF+ACGD LIVI GPR  GEGFIE+N+W P +GPPQWNLL
Sbjct: 463 VWVTIGRLPERAVSMNGWGLAFRACGDMLIVISGPRTHGEGFIELNSWVPSEGPPQWNLL 522

Query: 361 GRKQSGSFVYNCAVMGC 411
            RK+SG+FVYNCAVMGC
Sbjct: 523 ARKRSGNFVYNCAVMGC 539


>ref|XP_003518718.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  223 bits (567), Expect = 8e-56
 Identities = 104/137 (75%), Positives = 118/137 (86%)
 Frame = +1

Query: 1   LQTRIWTEIPNMSPVRARADGEIGMPVTAEAPPLVAVVNNELYAADYAEMEVRKYDKGRR 180
           LQTR WTEIPNMSP R+    E  MP TAEAPPLVAVVN+ELYAADYA+MEV+KYDK R 
Sbjct: 405 LQTRTWTEIPNMSPGRSSRGPE--MPATAEAPPLVAVVNDELYAADYADMEVKKYDKERN 462

Query: 181 KWETVGRLPERADSMNGWGLAFKACGDRLIVIGGPRAAGEGFIEINAWTPRDGPPQWNLL 360
            W T+GRLPERA SMNGWGLAF+ACGD+LIVIGGPR  GEGFIE+N+W P +GPP+W+LL
Sbjct: 463 VWFTIGRLPERAVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLL 522

Query: 361 GRKQSGSFVYNCAVMGC 411
            RK+SG+FVYNCAVMGC
Sbjct: 523 ARKRSGNFVYNCAVMGC 539


>ref|XP_003517954.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like isoform 1
           [Glycine max] gi|356498228|ref|XP_003517955.1|
           PREDICTED: F-box/kelch-repeat protein SKIP11-like
           isoform 2 [Glycine max]
          Length = 537

 Score =  221 bits (564), Expect = 2e-55
 Identities = 103/137 (75%), Positives = 119/137 (86%)
 Frame = +1

Query: 1   LQTRIWTEIPNMSPVRARADGEIGMPVTAEAPPLVAVVNNELYAADYAEMEVRKYDKGRR 180
           LQTR WTEIP+MSP R+    E  MP TAEAPPLVAVVN+ELYAADYA+MEV+KYDK R+
Sbjct: 403 LQTRTWTEIPSMSPGRSSRGPE--MPATAEAPPLVAVVNDELYAADYADMEVKKYDKERK 460

Query: 181 KWETVGRLPERADSMNGWGLAFKACGDRLIVIGGPRAAGEGFIEINAWTPRDGPPQWNLL 360
            W T+GRLPERA SMNGWGLAF+ACGD+LIVIGGPR  GEGFIE+N+W P +GPP+W+LL
Sbjct: 461 VWLTIGRLPERAVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLL 520

Query: 361 GRKQSGSFVYNCAVMGC 411
            RK+SG+FVYNCAVMGC
Sbjct: 521 ARKRSGNFVYNCAVMGC 537


>gb|AAT40540.1| kelch repeat-containing F-box family protein, putative [Solanum
           demissum]
          Length = 513

 Score =  221 bits (563), Expect = 2e-55
 Identities = 102/137 (74%), Positives = 116/137 (84%)
 Frame = +1

Query: 1   LQTRIWTEIPNMSPVRARADGEIGMPVTAEAPPLVAVVNNELYAADYAEMEVRKYDKGRR 180
           L T  WTEIPNMSPVR  A     +PVT+EAPPLVAVVNN+LYAADYA MEVRKYDK  +
Sbjct: 378 LTTGKWTEIPNMSPVRPNATRN-DIPVTSEAPPLVAVVNNQLYAADYAAMEVRKYDKQNK 436

Query: 181 KWETVGRLPERADSMNGWGLAFKACGDRLIVIGGPRAAGEGFIEINAWTPRDGPPQWNLL 360
            W ++GRLPERA SMNGWGLAF+ACGDRLIV+GGPR  GEG+IE+N+W P +GPP+W LL
Sbjct: 437 AWVSIGRLPERAASMNGWGLAFRACGDRLIVVGGPRVMGEGYIEVNSWVPSEGPPEWTLL 496

Query: 361 GRKQSGSFVYNCAVMGC 411
           GRK+SGSFVYNCAVMGC
Sbjct: 497 GRKRSGSFVYNCAVMGC 513


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