BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010566
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    65   8e-09
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    62   9e-08
emb|CCA17998.1| putative polyprotein [Albugo laibachii Nc14]           62   1e-07
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    62   1e-07
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    61   2e-07

>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = -1

Query: 318  SSLLHHNASTAGTTYSLLSCSELAHDIWILDTGATNHMCCDNTCMQNLQVLDKPITVKFP 139
            SS   +N +  G + SL +    +   WILD+GAT+H+ C    + + + ++ PITVK P
Sbjct: 720  SSCTVNNPTNPGMSLSLSA----SLTSWILDSGATDHVTCSLHNLHSHKRIN-PITVKLP 774

Query: 138  TGDSSIVTHIGSVYLHHISTTISDVLFVPSFKFNLLSVHKL 16
             G     TH G+V L   + T+ DVL++PSF FNL+S+ KL
Sbjct: 775  NGQYVHATHSGTVQLSS-NITLHDVLYIPSFTFNLISISKL 814


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
 Frame = -1

Query: 504 QQQMEALQLQMHNLQQHINKDQNVHDSAGFGKGFGHIAGPHDDTMVFGNNVIAMSTADQT 325
           QQ    +Q  + +L    N    V + A        I        +  + ++A ++   T
Sbjct: 309 QQSQPRMQQPIQHLISQFNAQVRVQEPAATS-----IYTSSPTATITEHGLMAQTSTSGT 363

Query: 324 F---DSSLLHHNASTAGTTYSLLSCSE-LAHDIWILDTGATNHMCCDNTCMQNLQVLDKP 157
                +SL + N +     ++L S    L+ D WI+D+GA++H+C D T  + L +    
Sbjct: 364 IPFPSTSLKYENNNLTFQNHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFREL-IHVSG 422

Query: 156 ITVKFPTGDSSIVTHIGSVYLHHISTTISDVLFVPSFKFNLLSV 25
           +TV  P G    +TH G++ +   +  + +VL VP FKFNL+SV
Sbjct: 423 VTVTLPNGTRVAITHTGTICITS-TLILHNVLLVPDFKFNLISV 465


>emb|CCA17998.1| putative polyprotein [Albugo laibachii Nc14]
          Length = 859

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -1

Query: 309 LHHNASTAGTTYSLLSCSELAHDIWILDTGATNHMCCDNTCMQNLQVLDKPITVKFPTGD 130
           +H ++    T+++ ++   +  +IW+LD+GAT+HMC   +  Q+L+ L+ PI +    G 
Sbjct: 58  VHRSSKPGDTSHAFMAVDHMERNIWLLDSGATSHMCYQKSDFQSLRNLEAPIKISIADGS 117

Query: 129 SSIVTHIGSVYL---HHISTTISDVLFVPSFKFNLLSV 25
           S      G++ +   +    TI DVL+VP     LLS+
Sbjct: 118 SVEAVATGNISITLTNGERVTIHDVLYVPDLDRRLLSI 155


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = -1

Query: 318 SSLLHHNASTAGTTYSLLSCSE-LAHDIWILDTGATNHMCCDNTCMQNLQVLDKPITVKF 142
           +SL + N +     ++L S    L+ D WI+D+GA++H+C D T  + L +    +TV  
Sbjct: 71  TSLKYENNNLTFQNHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFREL-IHVSGVTVTL 129

Query: 141 PTGDSSIVTHIGSVYLHHISTTISDVLFVPSFKFNLLSV 25
           P G    +TH G++ +   +  + +VL VP FKFNL+SV
Sbjct: 130 PNGTRVAITHTGTICITS-TLILHNVLLVPDFKFNLISV 167


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
 Frame = -1

Query: 321 DSSLLHHNASTAGTTYSLL-SCSELAHDIWILDTGATNHMCCDNTCMQNLQVLDKPITVK 145
           DS+ L  + S      SL  S S L   IWILD+GAT+H+C +++   ++       TV 
Sbjct: 345 DSNPLQQSISNFTGILSLSPSSSTLNPSIWILDSGATHHVCTNSSMFHSIHSFSSN-TVT 403

Query: 144 FPTGDSSIVTHIGSVYLH-HISTTISDVLFVPSFKFNLLSVHKL 16
            PTG    +T IG+++L  H+   +  VL++P+F+FNL+S+  L
Sbjct: 404 LPTGTKIPITGIGTIHLSPHL--VLEHVLYIPTFQFNLISISAL 445