BLASTX nr result

ID: Bupleurum21_contig00010565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010565
         (2010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38733.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_002517841.1| prohibitin, putative [Ricinus communis] gi|2...   368   4e-99
emb|CAN66748.1| hypothetical protein VITISV_005691 [Vitis vinifera]   366   1e-98
ref|XP_003634822.1| PREDICTED: prohibitin-2 isoform 2 [Vitis vin...   363   1e-97
ref|XP_002310417.1| predicted protein [Populus trichocarpa] gi|1...   362   2e-97

>emb|CBI38733.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  370 bits (951), Expect = e-100
 Identities = 190/228 (83%), Positives = 200/228 (87%)
 Frame = -3

Query: 1171 VNDFVFTFKTGLNMNFRNVNVPNVPGGGAASALIKXXXXXXXXXXXXGNSLYNVDGGHRA 992
            + D  F  +   NMNF NV VP VPGGGAASALIK             NSLYNV+GGHRA
Sbjct: 60   LTDEAFPEEASRNMNFNNVKVPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRA 119

Query: 991  IVFNRLVGVKDKVYPEGTHLMAPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLT 812
            IVFNR++GVKDKVYPEGTHLM PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLT
Sbjct: 120  IVFNRIIGVKDKVYPEGTHLMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLT 179

Query: 811  RPVADKLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRNILTK 632
            RPV D+LP IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIR ILT+
Sbjct: 180  RPVPDQLPAIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTE 239

Query: 631  RAANFNIALDDVSITTLTFGREFTAAIEAKQVAAQEAERAKFVVEKAE 488
            RAANFNIALDDVSIT+LTFG+EFTAAIEAKQVAAQEAERAKFVVEKAE
Sbjct: 240  RAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAE 287


>ref|XP_002517841.1| prohibitin, putative [Ricinus communis] gi|223542823|gb|EEF44359.1|
            prohibitin, putative [Ricinus communis]
          Length = 290

 Score =  368 bits (944), Expect = 4e-99
 Identities = 187/215 (86%), Positives = 196/215 (91%)
 Frame = -3

Query: 1132 MNFRNVNVPNVPGGGAASALIKXXXXXXXXXXXXGNSLYNVDGGHRAIVFNRLVGVKDKV 953
            MNF NV VP VPGGGAAS+LIK             NSLYNVDGGHRAI+FNRLVGVKDKV
Sbjct: 1    MNFNNVKVPKVPGGGAASSLIKLSAIGGLVVYAAANSLYNVDGGHRAIMFNRLVGVKDKV 60

Query: 952  YPEGTHLMAPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTIYRT 773
            YPEGTH M PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVA++LPTIYRT
Sbjct: 61   YPEGTHFMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVANELPTIYRT 120

Query: 772  LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRNILTKRAANFNIALDDVS 593
            LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIR ILT+RAANFN+ALDDVS
Sbjct: 121  LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNLALDDVS 180

Query: 592  ITTLTFGREFTAAIEAKQVAAQEAERAKFVVEKAE 488
            ITTLTFG+EFTAAIEAKQVAAQEAERAKF+VEKAE
Sbjct: 181  ITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAE 215


>emb|CAN66748.1| hypothetical protein VITISV_005691 [Vitis vinifera]
          Length = 291

 Score =  366 bits (940), Expect = 1e-98
 Identities = 187/215 (86%), Positives = 195/215 (90%)
 Frame = -3

Query: 1132 MNFRNVNVPNVPGGGAASALIKXXXXXXXXXXXXGNSLYNVDGGHRAIVFNRLVGVKDKV 953
            MNF NV VP VPGGGAASALIK             NSLYNV+GGHRAIVFNR++GVKDKV
Sbjct: 1    MNFNNVKVPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIIGVKDKV 60

Query: 952  YPEGTHLMAPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTIYRT 773
            YPEGTHLM PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPV D+LP IYRT
Sbjct: 61   YPEGTHLMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPAIYRT 120

Query: 772  LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRNILTKRAANFNIALDDVS 593
            LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIR ILT+RAANFNIALDDVS
Sbjct: 121  LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVS 180

Query: 592  ITTLTFGREFTAAIEAKQVAAQEAERAKFVVEKAE 488
            IT+LTFG+EFTAAIEAKQVAAQEAERAKFVVEKAE
Sbjct: 181  ITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAE 215


>ref|XP_003634822.1| PREDICTED: prohibitin-2 isoform 2 [Vitis vinifera]
          Length = 290

 Score =  363 bits (931), Expect = 1e-97
 Identities = 183/217 (84%), Positives = 194/217 (89%)
 Frame = -3

Query: 1138 LNMNFRNVNVPNVPGGGAASALIKXXXXXXXXXXXXGNSLYNVDGGHRAIVFNRLVGVKD 959
            +NMNF N+  P VPGGGAASALIK             NSLYNV+GGHRAIVFNR+VGVKD
Sbjct: 1    MNMNFNNIKAPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIVGVKD 60

Query: 958  KVYPEGTHLMAPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTIY 779
            KVYPEGTHLM PWF+RP+IYDVR RPHLVESTSGS DLQMVKIGLRVLTRP+ D+LPTIY
Sbjct: 61   KVYPEGTHLMIPWFDRPVIYDVRTRPHLVESTSGSHDLQMVKIGLRVLTRPLPDQLPTIY 120

Query: 778  RTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRNILTKRAANFNIALDD 599
            RTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VSREIR +LT+RAANFNIALDD
Sbjct: 121  RTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKLLTERAANFNIALDD 180

Query: 598  VSITTLTFGREFTAAIEAKQVAAQEAERAKFVVEKAE 488
            VSIT+LTFGREFTAAIEAKQVAAQEAERAKFVVEKAE
Sbjct: 181  VSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAE 217


>ref|XP_002310417.1| predicted protein [Populus trichocarpa] gi|118484973|gb|ABK94351.1|
            unknown [Populus trichocarpa] gi|222853320|gb|EEE90867.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  362 bits (930), Expect = 2e-97
 Identities = 183/215 (85%), Positives = 193/215 (89%)
 Frame = -3

Query: 1132 MNFRNVNVPNVPGGGAASALIKXXXXXXXXXXXXGNSLYNVDGGHRAIVFNRLVGVKDKV 953
            MNF+NV VPN+PGGGA   LIK             NSLYNVDGGHRAI+FNR+VGVKDKV
Sbjct: 1    MNFKNVKVPNLPGGGAIGTLIKLGVIGGLGLYGAANSLYNVDGGHRAIMFNRIVGVKDKV 60

Query: 952  YPEGTHLMAPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTIYRT 773
            YPEGTH M PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVAD+LP IYRT
Sbjct: 61   YPEGTHFMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADQLPEIYRT 120

Query: 772  LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRNILTKRAANFNIALDDVS 593
            LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIR ILT+RA NFNIALDDVS
Sbjct: 121  LGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAVNFNIALDDVS 180

Query: 592  ITTLTFGREFTAAIEAKQVAAQEAERAKFVVEKAE 488
            IT+LTFG+EFTAAIEAKQVAAQEAERAKF+VEKAE
Sbjct: 181  ITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAE 215


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