BLASTX nr result

ID: Bupleurum21_contig00010558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010558
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874729.1| hypothetical protein ARALYDRAFT_490003 [Arab...    95   7e-18
emb|CBI34769.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002275737.1| PREDICTED: uncharacterized protein LOC100263...    94   9e-18
ref|NP_567383.1| uncharacterized protein [Arabidopsis thaliana] ...    93   3e-17
emb|CAB44324.1| putative protein [Arabidopsis thaliana] gi|72678...    93   3e-17

>ref|XP_002874729.1| hypothetical protein ARALYDRAFT_490003 [Arabidopsis lyrata subsp.
           lyrata] gi|297320566|gb|EFH50988.1| hypothetical protein
           ARALYDRAFT_490003 [Arabidopsis lyrata subsp. lyrata]
          Length = 687

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 10/116 (8%)
 Frame = +2

Query: 2   TNKEADKSKSSCEERRTSK-EDEDLIHKIKVIEFNGRFTPIILQGGNGPCALLAICNVLL 178
           TN+EA + +    +  T+  E+E++++K K I+F GR TPIILQ  NGPC LLAICNVLL
Sbjct: 16  TNQEAMQQQDLLPKETTNTTEEEEILYKTKSIQFLGRTTPIILQNENGPCPLLAICNVLL 75

Query: 179 LRNDLQLDEGSTEISQQLLLSRVFDEL--NKSKTDNKD-------AENITDAIPCL 319
           LRN+L+L+    E+SQ+ L+S V D L  + SK +NKD        +NI DAI  L
Sbjct: 76  LRNNLKLNPDCYEVSQERLMSLVVDRLIDSNSKVNNKDEGYIENQQQNIADAIDLL 131


>emb|CBI34769.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 55/112 (49%), Positives = 72/112 (64%), Gaps = 12/112 (10%)
 Frame = +2

Query: 23  SKSSCEERRTSKEDEDLIHKIKVIEFNGRFTPIILQGGNGPCALLAICNVLLLRNDLQLD 202
           S+   + +R  +  ++ +HK KV++F GR TPIILQ  NGPC LLAICNVLLL+N+L L 
Sbjct: 3   SEEQQQPQRREEPADECLHKTKVVQFLGRTTPIILQNENGPCPLLAICNVLLLKNNLNLS 62

Query: 203 EGSTEISQQLLLSRVFDEL--NKSKTDNKDA-------ENITDAI---PCLA 322
               E+SQQ LLS V + L  + S  +NKDA       +NI+DAI   PCLA
Sbjct: 63  PDIAEVSQQKLLSLVAERLIDSNSNINNKDAGYVENQQQNISDAIDLLPCLA 114


>ref|XP_002275737.1| PREDICTED: uncharacterized protein LOC100263264 [Vitis vinifera]
          Length = 720

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 55/112 (49%), Positives = 72/112 (64%), Gaps = 12/112 (10%)
 Frame = +2

Query: 23  SKSSCEERRTSKEDEDLIHKIKVIEFNGRFTPIILQGGNGPCALLAICNVLLLRNDLQLD 202
           S+   + +R  +  ++ +HK KV++F GR TPIILQ  NGPC LLAICNVLLL+N+L L 
Sbjct: 3   SEEQQQPQRREEPADECLHKTKVVQFLGRTTPIILQNENGPCPLLAICNVLLLKNNLNLS 62

Query: 203 EGSTEISQQLLLSRVFDEL--NKSKTDNKDA-------ENITDAI---PCLA 322
               E+SQQ LLS V + L  + S  +NKDA       +NI+DAI   PCLA
Sbjct: 63  PDIAEVSQQKLLSLVAERLIDSNSNINNKDAGYVENQQQNISDAIDLLPCLA 114


>ref|NP_567383.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21553726|gb|AAM62819.1| unknown [Arabidopsis
           thaliana] gi|110738711|dbj|BAF01280.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332657659|gb|AEE83059.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 682

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 9/115 (7%)
 Frame = +2

Query: 2   TNKEADKSKSSCEERRTSKEDEDLIHKIKVIEFNGRFTPIILQGGNGPCALLAICNVLLL 181
           TN+EA + +   +E  T   +E++++K K I+F GR TPIILQ  NGPC LLAICNVLLL
Sbjct: 16  TNQEAMQQQDLPKETTT---EEEILYKTKSIQFLGRTTPIILQNENGPCPLLAICNVLLL 72

Query: 182 RNDLQLDEGSTEISQQLLLSRVFDEL--NKSKTDNKD-------AENITDAIPCL 319
           RN+L L+    E+SQ+ L+S V D L  + SK +NKD        +NI DAI  L
Sbjct: 73  RNNLNLNPDCYEVSQERLMSLVVDRLIDSNSKVNNKDEGYIENQQQNIADAIDLL 127


>emb|CAB44324.1| putative protein [Arabidopsis thaliana] gi|7267886|emb|CAB78229.1|
           putative protein [Arabidopsis thaliana]
          Length = 626

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 9/115 (7%)
 Frame = +2

Query: 2   TNKEADKSKSSCEERRTSKEDEDLIHKIKVIEFNGRFTPIILQGGNGPCALLAICNVLLL 181
           TN+EA + +   +E  T   +E++++K K I+F GR TPIILQ  NGPC LLAICNVLLL
Sbjct: 16  TNQEAMQQQDLPKETTT---EEEILYKTKSIQFLGRTTPIILQNENGPCPLLAICNVLLL 72

Query: 182 RNDLQLDEGSTEISQQLLLSRVFDEL--NKSKTDNKD-------AENITDAIPCL 319
           RN+L L+    E+SQ+ L+S V D L  + SK +NKD        +NI DAI  L
Sbjct: 73  RNNLNLNPDCYEVSQERLMSLVVDRLIDSNSKVNNKDEGYIENQQQNIADAIDLL 127


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