BLASTX nr result

ID: Bupleurum21_contig00010539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010539
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...   124   1e-26
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|NP_001241600.1| uncharacterized protein LOC100804857 [Glycin...   102   6e-20
ref|XP_002531334.1| conserved hypothetical protein [Ricinus comm...   102   6e-20
ref|XP_003554330.1| PREDICTED: uncharacterized protein LOC100783...   100   2e-19

>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
 Frame = -1

Query: 584 KGSREKHGVLLEKCNVTWAPDVYDPIPTAVSHVVTNKSPXXXXXXXXXXXXXXXKQRAAG 405
           KGSR+K G+ L+K NVTWAPDVYDP PT VSH V N                  K +  G
Sbjct: 160 KGSRDKEGIPLKKLNVTWAPDVYDPPPTIVSHTVRN----CKKQQQSKNNRKNGKHKQKG 215

Query: 404 KSSMGSRGKDKKQTRKY--SGGSSSRCFKALDDNVRDDQVEHHADMVDFDIGSPDPYCGT 231
           K++ GS GKDKKQ RK   SG    R F+  D  +  + ++   ++ DF++GSPD YCG+
Sbjct: 216 KAARGSNGKDKKQLRKIVGSGDRGFRSFEVRDKLIASNFIDSSRELEDFEVGSPDGYCGS 275

Query: 230 SFLKNNVTKLHFSVAEAT 177
           SFL+ +V K+HFSVAEAT
Sbjct: 276 SFLRKSVAKVHFSVAEAT 293


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  105 bits (263), Expect = 4e-21
 Identities = 65/138 (47%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
 Frame = -1

Query: 584 KGSREKHGVLLEKCNVTWAPDVYDPIPTAVSHVVTN---KSPXXXXXXXXXXXXXXXKQR 414
           KGSREK G    K  V+WAPDVYDPIP ++SH V +   KS                K+ 
Sbjct: 103 KGSREKQGGSPRKLTVSWAPDVYDPIPNSLSHSVKSKQKKSSRKDRDKDNNHNKKNGKKG 162

Query: 413 AAGKSSMGSRGKDKKQTRKYSGGSSSRCFKALDDNVRDDQVEHHADMVDFDIGSPDPYCG 234
             G SS G  GKDKKQ RK SGG S +C+K +D            +  DF +GSPD YCG
Sbjct: 163 QKGSSSKGLGGKDKKQFRK-SGGRSDKCYKTMD----------APEDTDFGVGSPD-YCG 210

Query: 233 TSFLKNNVTKLHFSVAEA 180
           +SFLKN+  K H+SVAEA
Sbjct: 211 SSFLKNSGAKFHYSVAEA 228


>ref|NP_001241600.1| uncharacterized protein LOC100804857 [Glycine max]
           gi|255635165|gb|ACU17939.1| unknown [Glycine max]
          Length = 257

 Score =  102 bits (253), Expect = 6e-20
 Identities = 66/137 (48%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
 Frame = -1

Query: 584 KGSREKHGVLLEKCNVTWAPDVYDPIPTAVSHVV-TNKSPXXXXXXXXXXXXXXXKQRAA 408
           KGSREKHG    K NV WA DVYDP+PT +SH V +NK                  Q+  
Sbjct: 127 KGSREKHGGSQVKLNVKWAADVYDPVPTLLSHTVRSNKKQQKSRKKKPEKKNGKKGQK-- 184

Query: 407 GKSSMGSRGKDKKQTRKYSGGSSSRCFKALDDNVRDDQVEHHADMVD-FDIGSPDPYCGT 231
           G SS G   KD KQ RK  GG+S  C+K++D     D+V   A  +D  D+ S D YCGT
Sbjct: 185 GNSSRGGSSKD-KQFRKL-GGTSGLCYKSMDS---CDKVLGVATELDALDVRSQDSYCGT 239

Query: 230 SFLKNNVTKLHFSVAEA 180
           SFLK +VT+LH+SVAEA
Sbjct: 240 SFLKKSVTELHYSVAEA 256


>ref|XP_002531334.1| conserved hypothetical protein [Ricinus communis]
           gi|223529056|gb|EEF31041.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score =  102 bits (253), Expect = 6e-20
 Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
 Frame = -1

Query: 584 KGSREKHGVLLEKCNVTWAPDVYDPIPTAVSHVVTN---KSPXXXXXXXXXXXXXXXKQR 414
           KGSREK G  L K  V+WAPDVYDPIP ++SH V +   KS                 +R
Sbjct: 104 KGSREKLGASLRKLTVSWAPDVYDPIPNSLSHTVKSKQKKSKKDRDRDKESNNYKKNGKR 163

Query: 413 AAGKSSMGSRGKDKKQTRKYSGGSSSRCFKALDDNVRDDQVEHHADMVDFDIGSPDPYCG 234
               +S G  GKDKKQ RK +GG S R +K L  +   D ++      +F++GSPD YCG
Sbjct: 164 GQKGNSRGGGGKDKKQLRK-AGGRSDRGYKTLSISESPDNLD------EFNVGSPD-YCG 215

Query: 233 TSFLKNNVTKLHFSVAEA 180
           +SFLK +    H+SVAEA
Sbjct: 216 SSFLKKSPANFHYSVAEA 233


>ref|XP_003554330.1| PREDICTED: uncharacterized protein LOC100783136 [Glycine max]
          Length = 254

 Score =  100 bits (249), Expect = 2e-19
 Identities = 62/136 (45%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
 Frame = -1

Query: 584 KGSREKHGVLLEKCNVTWAPDVYDPIPTAVSHVV-TNKSPXXXXXXXXXXXXXXXKQRAA 408
           KGSREKHG    K NV WA DVYDPIPT +SH V +NK                  Q+  
Sbjct: 124 KGSREKHGGSQVKLNVKWASDVYDPIPTLLSHTVRSNKKQQKSRKKKPEKKNGKKGQK-- 181

Query: 407 GKSSMGSRGKDKKQTRKYSGGSSSRCFKALDDNVRDDQVEHHADMVDFDIGSPDPYCGTS 228
           G SS G   KD KQ RK  GG+S  C+K++D    D  +    ++   ++ S D YCGTS
Sbjct: 182 GNSSRGGSNKD-KQVRKL-GGTSGLCYKSMDS--CDKVLGASTELDALEVRSQDSYCGTS 237

Query: 227 FLKNNVTKLHFSVAEA 180
           FLK +VT++H+SVAEA
Sbjct: 238 FLKKSVTEVHYSVAEA 253


Top