BLASTX nr result

ID: Bupleurum21_contig00010532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010532
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulga...   138   5e-31
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   132   4e-29
gb|AAT40486.1| putative polyprotein [Solanum demissum]                130   8e-29
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   129   3e-28
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   128   4e-28

>emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 266

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/105 (58%), Positives = 80/105 (76%)
 Frame = -2

Query: 336 EMARALRFQAGLPLQFWGDCVLTATHITNRLPTSIHKGKTPYELLYKKLPNYRHLKCFGC 157
           EM+RALRFQAGL L++WGDCV  A HITNRLPT +  G +PYE+++ K PN   L+ FGC
Sbjct: 158 EMSRALRFQAGLALKYWGDCVQAAVHITNRLPTPLLNGLSPYEVMHNKKPNSSVLRTFGC 217

Query: 156 LAFAYNPSREKDKFQARGIPCIFIGYSAKKKGYRLHNLLTGTSFV 22
           LA AYNPSR KDKF+ RG+PC+++G +  +KGY+L N+ T   +V
Sbjct: 218 LAMAYNPSRYKDKFEERGVPCVYLGNALNQKGYKLLNINTNGKYV 262


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/110 (52%), Positives = 82/110 (74%)
 Frame = -2

Query: 333 MARALRFQAGLPLQFWGDCVLTATHITNRLPTSIHKGKTPYELLYKKLPNYRHLKCFGCL 154
           + RALRFQA LP++FWG+CVL A ++ N  P+    GKTPYE+LY + P+Y+H+  FGCL
Sbjct: 492 VVRALRFQAHLPIEFWGECVLIARYLINXTPSVFLDGKTPYEILYGQAPSYKHIXTFGCL 551

Query: 153 AFAYNPSREKDKFQARGIPCIFIGYSAKKKGYRLHNLLTGTSFVSRDVKF 4
            +A++ +R+KDKF +R   CIF+GY   KKG+RL++L +G  FVSR+V F
Sbjct: 552 CYAHDQNRDKDKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFVSRBVIF 601


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/110 (55%), Positives = 81/110 (73%)
 Frame = -2

Query: 333 MARALRFQAGLPLQFWGDCVLTATHITNRLPTSIHKGKTPYELLYKKLPNYRHLKCFGCL 154
           + RALRFQA LP+ FWG+ VL A ++ NR PT I  GKTPYE+L+ K P+Y+ LK FGC+
Sbjct: 510 VTRALRFQANLPISFWGEYVLPAVYLINRTPTLILNGKTPYEVLFGKEPSYKPLKVFGCI 569

Query: 153 AFAYNPSREKDKFQARGIPCIFIGYSAKKKGYRLHNLLTGTSFVSRDVKF 4
            FA+  SR+KDKF ++   CIF+GY   KKG+R+++L TG  +VSRDV F
Sbjct: 570 CFAHLKSRDKDKFGSKSRQCIFLGYPFGKKGWRVYDLETGDLYVSRDVTF 619


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/111 (52%), Positives = 81/111 (72%)
 Frame = -2

Query: 333  MARALRFQAGLPLQFWGDCVLTATHITNRLPTSIHKGKTPYELLYKKLPNYRHLKCFGCL 154
            +ARA  FQ  LP++FWG+ +LTATH+ NR P+++ KGKTPYELL+ + P+Y  L+ FGCL
Sbjct: 669  VARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSFGCL 728

Query: 153  AFAYNPSREKDKFQARGIPCIFIGYSAKKKGYRLHNLLTGTSFVSRDVKFY 1
             +A+   R KDKF +R   C+FIGY   KK +R+++L TG  F SRDV+F+
Sbjct: 729  CYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFH 779


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/110 (52%), Positives = 81/110 (73%)
 Frame = -2

Query: 333 MARALRFQAGLPLQFWGDCVLTATHITNRLPTSIHKGKTPYELLYKKLPNYRHLKCFGCL 154
           +ARALRFQ+ LP+QFWG+C+L+A ++ NR P+ + +GK+PYE+LYK  PNY HL+ FG L
Sbjct: 459 IARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSL 518

Query: 153 AFAYNPSREKDKFQARGIPCIFIGYSAKKKGYRLHNLLTGTSFVSRDVKF 4
            +A+N + + DKF AR   C+F+GY   +KG+RL +L     FVSRDV F
Sbjct: 519 CYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIF 568


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