BLASTX nr result

ID: Bupleurum21_contig00010512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010512
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637734.1| ATP-dependent RNA helicase [Medicago truncat...   142   4e-32
ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putativ...   139   3e-31
ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   136   2e-30
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   135   3e-30
emb|CBI40505.3| unnamed protein product [Vitis vinifera]              135   3e-30

>ref|XP_003637734.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503669|gb|AES84872.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 290

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/91 (75%), Positives = 78/91 (85%)
 Frame = -3

Query: 306 PLSEASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVELAND 127
           P+ +A  P +D DT KKVE+ALSNV+MKNK AAYQAWLGYYNSNK VGKDK RLVELAN+
Sbjct: 199 PIVKAPVPLVDPDTKKKVERALSNVEMKNKEAAYQAWLGYYNSNKKVGKDKYRLVELANE 258

Query: 126 FSSCLGLNIPPAISKQVLGKMGLRNVPGLRS 34
           FS C+GL+ PPAI K VLGKMGL+NVPGLRS
Sbjct: 259 FSRCMGLDNPPAIPKLVLGKMGLKNVPGLRS 289


>ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 751

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/91 (73%), Positives = 79/91 (86%)
 Frame = -3

Query: 306 PLSEASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVELAND 127
           P+S+A  PS+D DT KKVE++LS+V+MKNK AAYQAWLGYYNS+K VG+DK RLVELAND
Sbjct: 660 PISKAPVPSVDPDTKKKVERSLSHVEMKNKEAAYQAWLGYYNSSKLVGRDKYRLVELAND 719

Query: 126 FSSCLGLNIPPAISKQVLGKMGLRNVPGLRS 34
           FS  +GL+ PPAI K VLGKMGLRN+PGLRS
Sbjct: 720 FSRSMGLDNPPAIPKLVLGKMGLRNIPGLRS 750


>ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
           max]
          Length = 703

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/84 (78%), Positives = 74/84 (88%)
 Frame = -3

Query: 285 PSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVELANDFSSCLGL 106
           PS+D DT KKVEKALSNV+MKNK AAYQAWLGYYNSNK VG+DK RLVELAN+FS  +GL
Sbjct: 619 PSVDPDTKKKVEKALSNVEMKNKEAAYQAWLGYYNSNKKVGRDKYRLVELANEFSRSMGL 678

Query: 105 NIPPAISKQVLGKMGLRNVPGLRS 34
           + PPAI K VLGKMGLRN+PGLR+
Sbjct: 679 DNPPAIPKLVLGKMGLRNIPGLRA 702


>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
           vinifera]
          Length = 751

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = -3

Query: 306 PLSEASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVELAND 127
           P+++A +P +D DT KKVE+ALS V+MK+K AAYQAWLGYYNSNK VG+DK RLVELAN+
Sbjct: 660 PITKAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGYYNSNKKVGRDKVRLVELANE 719

Query: 126 FSSCLGLNIPPAISKQVLGKMGLRNVPGLRS 34
           FS  +GL+ PPAI K +LGKMGLRNVPGLRS
Sbjct: 720 FSRTMGLDNPPAIPKLILGKMGLRNVPGLRS 750


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = -3

Query: 306 PLSEASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVELAND 127
           P+++A +P +D DT KKVE+ALS V+MK+K AAYQAWLGYYNSNK VG+DK RLVELAN+
Sbjct: 641 PITKAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGYYNSNKKVGRDKVRLVELANE 700

Query: 126 FSSCLGLNIPPAISKQVLGKMGLRNVPGLRS 34
           FS  +GL+ PPAI K +LGKMGLRNVPGLRS
Sbjct: 701 FSRTMGLDNPPAIPKLILGKMGLRNVPGLRS 731


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