BLASTX nr result

ID: Bupleurum21_contig00010492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010492
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...   223   3e-56
gb|ACU22680.1| unknown [Glycine max]                                  223   3e-56
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...   216   7e-54
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   206   4e-51
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   201   1e-49

>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score =  223 bits (569), Expect = 3e-56
 Identities = 120/260 (46%), Positives = 161/260 (61%)
 Frame = -2

Query: 800 IVGSCNGLLCLVSGDNRLLLWNPVTRKSKELQNSDIENYKGSHIVHGFGYDELDDDYKVV 621
           IVGSC+G+LC      R LLWNP   K K+L   D E   GS+ +HGFGYD   D YKVV
Sbjct: 142 IVGSCDGILCFAVDQRRALLWNPSIGKFKKLPPLDNERRNGSYTIHGFGYDRFADSYKVV 201

Query: 620 VIFCSYLKERRTYKMKVKIYSLRSDSWRSIEDFPATIVLNKLGKLVNGVLHWAASRELSL 441
            IFC     R  Y+ +VK+ +L +DSWR I++FP+ +  ++ GK V+G ++W AS + S 
Sbjct: 202 AIFCYECDGR--YETQVKVLTLGTDSWRRIQEFPSGLPFDESGKFVSGTVNWLASNDSS- 258

Query: 440 QSLDSWIIVSLDLKTEQYGEVLQPKYGEGISNLTLGVLERSLCVLVNYQNIRADVWTMKE 261
               S IIVSLDL  E Y EVLQP YG  + NLTLGVL   LCVL ++ +   DVW MK+
Sbjct: 259 ----SLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVL-SHADTFLDVWLMKD 313

Query: 260 YGEIKSWTKLASIPYVGIPWSYEYSMPICISTNGDIVLEGGDGIVVYNSKDCRFKDIVIT 81
           YG  +SWTKL  +PY+GI  SY Y+  +CIS +  +++E    + VYNS++   K   I 
Sbjct: 314 YGNKESWTKLFRVPYMGISDSYLYTKALCISEDDQVLMEFNSELAVYNSRNGTSKIPDIQ 373

Query: 80  KSFVCFNATIYIESLVSPNV 21
             ++     +YIESL+SP V
Sbjct: 374 DIYMYMTPEVYIESLISPCV 393


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score =  223 bits (569), Expect = 3e-56
 Identities = 120/260 (46%), Positives = 161/260 (61%)
 Frame = -2

Query: 800 IVGSCNGLLCLVSGDNRLLLWNPVTRKSKELQNSDIENYKGSHIVHGFGYDELDDDYKVV 621
           IVGSC+G+LC      R LLWNP   K K+L   D E   GS+ +HGFGYD   D YKVV
Sbjct: 142 IVGSCDGILCFAVDQRRALLWNPSIGKFKKLPPLDNERRNGSYTIHGFGYDRFADSYKVV 201

Query: 620 VIFCSYLKERRTYKMKVKIYSLRSDSWRSIEDFPATIVLNKLGKLVNGVLHWAASRELSL 441
            IFC     R  Y+ +VK+ +L +DSWR I++FP+ +  ++ GK V+G ++W AS + S 
Sbjct: 202 AIFCYECDGR--YETQVKVLTLGTDSWRRIQEFPSGLPFDESGKFVSGTVNWLASNDSS- 258

Query: 440 QSLDSWIIVSLDLKTEQYGEVLQPKYGEGISNLTLGVLERSLCVLVNYQNIRADVWTMKE 261
               S IIVSLDL  E Y EVLQP YG  + NLTLGVL   LCVL ++ +   DVW MK+
Sbjct: 259 ----SLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVL-SHADTFLDVWLMKD 313

Query: 260 YGEIKSWTKLASIPYVGIPWSYEYSMPICISTNGDIVLEGGDGIVVYNSKDCRFKDIVIT 81
           YG  +SWTKL  +PY+GI  SY Y+  +CIS +  +++E    + VYNS++   K   I 
Sbjct: 314 YGNKESWTKLFRVPYMGISDSYLYTKALCISEDDQVLMEFNSELAVYNSRNGTSKIPDIQ 373

Query: 80  KSFVCFNATIYIESLVSPNV 21
             ++     +YIESL+SP V
Sbjct: 374 DIYMYMTPEVYIESLISPCV 393


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  216 bits (549), Expect = 7e-54
 Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 4/278 (1%)
 Frame = -2

Query: 842 VVDFPL-KDQYQSVSIVGSCNGLLCLVSGDNRLLLWNPVTRKSKELQNSDIENYKGSHIV 666
           V+D+ L KD Y+   +VGSC+GL+CL    + ++LWNP TR    L +       GS+ V
Sbjct: 166 VIDYYLLKDIYRYDWVVGSCDGLVCLGIKQDFVVLWNPSTRVFNRLPDLGFAKKLGSYTV 225

Query: 665 HGFGYDELDDDYKVVVIFCSYLKE---RRTYKMKVKIYSLRSDSWRSIEDFPATIVLNKL 495
            GFGYD   DDYKV+ +FC   K       Y  ++K+ +L+ + WR +EDF   +  +  
Sbjct: 226 FGFGYDSQIDDYKVLAMFCFLTKSVYGGSRYVTRIKVCALKGECWRRLEDFGLGLPYDVS 285

Query: 494 GKLVNGVLHWAASRELSLQSLDSWIIVSLDLKTEQYGEVLQPKYGEGISNLTLGVLERSL 315
           GK V+G L W    E S+ S  +W IV+ DL  E + EV+QP YG       LGVL+  L
Sbjct: 286 GKHVDGKLCWPVMPEGSIGS--AWSIVAFDLAQEMFEEVVQPDYGAVGYERVLGVLQGWL 343

Query: 314 CVLVNYQNIRADVWTMKEYGEIKSWTKLASIPYVGIPWSYEYSMPICISTNGDIVLEGGD 135
           CV+ NYQ +RADVW +KE+G   SWTKL SIPY+  P  + YS+P+CI   G+++LE   
Sbjct: 344 CVMCNYQGVRADVWVLKEFGVRDSWTKLFSIPYLDDPLWFHYSVPLCIDVGGEVLLEYKS 403

Query: 134 GIVVYNSKDCRFKDIVITKSFVCFNATIYIESLVSPNV 21
            +V+YN K   F+  V+  +  C  A +YI+SLVSP V
Sbjct: 404 VLVIYNPKHGTFRYPVMNGASSCIEADVYIQSLVSPVV 441


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  206 bits (525), Expect = 4e-51
 Identities = 115/273 (42%), Positives = 160/273 (58%), Gaps = 2/273 (0%)
 Frame = -2

Query: 839 VDFPLKDQYQSVSIVGSCNGLLCLVSGDNRLLLWNPVTRKSKELQNSDIENYKGSHIVHG 660
           +++P+K++++   IVGSCNGLLC     + +LLWNP  R SK+          G     G
Sbjct: 134 LNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFG 193

Query: 659 FGYDELDDDYKVVVIFCSYLKERRTYKMKVKIYSLRSDSWRSIEDFPATIV-LNKLGKLV 483
            GYD +++DYKVV +FC         + KVK+YS+ ++SWR I+DFP         GK V
Sbjct: 194 LGYDHVNEDYKVVAVFCD--PSEYFIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFV 251

Query: 482 NGVLHWAASRELSLQSLDSWIIVSLDLKTEQYGEVLQPKYG-EGISNLTLGVLERSLCVL 306
           +G L+WAA+  +   SL  W+IVSLDL  E Y EVL P Y  E  S   LGVL+  LC+ 
Sbjct: 252 SGTLNWAANHSIGSSSL--WVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMN 309

Query: 305 VNYQNIRADVWTMKEYGEIKSWTKLASIPYVGIPWSYEYSMPICISTNGDIVLEGGDGIV 126
            +Y+     VW MK+YG  +SW KL SIPYV  P ++ YS P  IS NG+++L     ++
Sbjct: 310 YDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLMFEFDLI 369

Query: 125 VYNSKDCRFKDIVITKSFVCFNATIYIESLVSP 27
           +YN +D  FK   I      F+A +Y+E+LVSP
Sbjct: 370 LYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 402


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  201 bits (512), Expect = 1e-49
 Identities = 112/273 (41%), Positives = 159/273 (58%), Gaps = 2/273 (0%)
 Frame = -2

Query: 839 VDFPLKDQYQSVSIVGSCNGLLCLVSGDNRLLLWNPVTRKSKELQNSDIENYKGSHIVHG 660
           +++P+K++++   IVGSCNGLLC     + +LLWNP  R SK+          G     G
Sbjct: 135 LNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFG 194

Query: 659 FGYDELDDDYKVVVIFCSYLKERRTYKMKVKIYSLRSDSWRSIEDFP-ATIVLNKLGKLV 483
            GYD +++DYKVV +FC         + KVK+YS+ ++SWR I+DFP   +     GK V
Sbjct: 195 LGYDHVNEDYKVVAVFCD--PSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFV 252

Query: 482 NGVLHWAASRELSLQSLDSWIIVSLDLKTEQYGEVLQPKYG-EGISNLTLGVLERSLCVL 306
           +G L+WAA+  +   S   W+IVSLDL  E Y EVL P Y  E  S  +LGVL+  LC+ 
Sbjct: 253 SGTLNWAANHSIGPSSF--WVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMN 310

Query: 305 VNYQNIRADVWTMKEYGEIKSWTKLASIPYVGIPWSYEYSMPICISTNGDIVLEGGDGIV 126
            +Y+     VW MK+YG  +SW KL SIPYV  P  + YS P  IS NG ++L     ++
Sbjct: 311 YDYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLMFEFDLI 370

Query: 125 VYNSKDCRFKDIVITKSFVCFNATIYIESLVSP 27
           +Y+ ++  FK   I      F+A +Y+E+LVSP
Sbjct: 371 LYDPRNNSFKYPKIESGKGWFDAEVYVETLVSP 403


Top